scaffold19142 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold19142 |
3 |
688 |
- |
Copia-66_GM-I |
LTR/Copia |
| scaffold19142 |
678 |
965 |
- |
Copia-66_GM-I |
LTR/Copia |
| scaffold19142 |
993 |
1070 |
- |
Copia-66_GM-I |
LTR/Copia |
| scaffold19142 |
1052 |
3176 |
- |
Copia-66_GM-I |
LTR/Copia |
| scaffold19142 |
2897 |
2948 |
+ |
A-rich |
Low_complexity |
| scaffold19142 |
3228 |
3341 |
- |
Copia-66_GM-I |
LTR/Copia |
| scaffold19142 |
3531 |
3594 |
- |
Copia-66_GM-I |
LTR/Copia |
| scaffold19142 |
4351 |
4556 |
- |
RS682 |
Unspecified |
| scaffold19142 |
4386 |
4931 |
+ |
RS3218 |
Unspecified |
| scaffold19142 |
4946 |
5051 |
- |
RS371 |
Unspecified |
| scaffold19142 |
5052 |
5625 |
+ |
RS1275 |
Unspecified |
| scaffold19142 |
5471 |
5669 |
- |
RS8043 |
Unspecified |
| scaffold19142 |
5867 |
5910 |
+ |
(T)n |
Simple_repeat |
| scaffold19142 |
5867 |
6150 |
+ |
(T)n |
Simple_repeat |
| scaffold19142 |
5895 |
6150 |
+ |
RS1296 |
Unspecified |
| scaffold19142 |
6133 |
6767 |
+ |
RS1296 |
Unspecified |
| scaffold19142 |
7072 |
7113 |
+ |
Copia-18_SB-I |
LTR/Copia |
| scaffold19142 |
7082 |
7195 |
+ |
Copia16-VV_I-int |
LTR/Copia |
| scaffold19142 |
7494 |
7535 |
+ |
Copia16-VV_I-int |
LTR/Copia |
| scaffold19142 |
7505 |
9293 |
+ |
Copia-101_Mad-I |
LTR/Copia |
| scaffold19142 |
9467 |
10942 |
+ |
Copia-101_Mad-I |
LTR/Copia |
| scaffold19142 |
10936 |
11428 |
- |
PL522 |
Unspecified |
| scaffold19142 |
11750 |
13015 |
+ |
PL568 |
Unspecified |
| scaffold19142 |
13003 |
13625 |
- |
RS387 |
Unspecified |
| scaffold19142 |
13624 |
14092 |
+ |
Copia-101_Mad-I |
LTR/Copia |
| scaffold19142 |
14206 |
14716 |
- |
RS91 |
Unspecified |
| scaffold19142 |
15114 |
15154 |
+ |
(TAATGTAT)n |
Simple_repeat |
| scaffold19142 |
15328 |
15357 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold19142 |
15545 |
15606 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold19142 |
16315 |
16624 |
+ |
RS1921 |
Unspecified |
| scaffold19142 |
16608 |
17171 |
+ |
RS2097 |
Unspecified |
| scaffold19142 |
17195 |
17224 |
+ |
(T)n |
Simple_repeat |
| scaffold19142 |
17964 |
18003 |
+ |
(TATAAT)n |
Simple_repeat |
| scaffold19142 |
18160 |
18200 |
+ |
(TTTTACA)n |
Simple_repeat |
| scaffold19142 |
19241 |
19494 |
- |
RS440 |
Unspecified |
| scaffold19142 |
19491 |
19653 |
+ |
RS2159 |
Unspecified |
| scaffold19142 |
19659 |
19698 |
+ |
A-rich |
Low_complexity |
| scaffold19142 |
20971 |
21028 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold19142 |
21170 |
21186 |
+ |
(A)n |
Simple_repeat |
| scaffold19142 |
21765 |
21823 |
+ |
(TAT)n |
Simple_repeat |
| scaffold19142 |
22126 |
22290 |
- |
PL753 |
Unspecified |
| scaffold19142 |
22332 |
22567 |
- |
PL753 |
Unspecified |
| scaffold19142 |
22640 |
22733 |
- |
RS16382 |
Unspecified |
| scaffold19142 |
23086 |
23314 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold19142 |
23587 |
23829 |
+ |
RS16888 |
Unspecified |
| scaffold19142 |
24208 |
24227 |
+ |
(T)n |
Simple_repeat |
| scaffold19142 |
24599 |
25043 |
+ |
PL2 |
Unspecified |
| scaffold19142 |
25428 |
27265 |
- |
Copia-48_ST-I |
LTR/Copia |
| scaffold19142 |
27266 |
27295 |
+ |
(AGGTGT)n |
Simple_repeat |
| scaffold19142 |
27296 |
28255 |
- |
Copia-48_ST-I |
LTR/Copia |
| scaffold19142 |
28332 |
28665 |
- |
Copia-48_ST-I |
LTR/Copia |
| scaffold19142 |
28894 |
28967 |
- |
Copia-48_ST-I |
LTR/Copia |
| scaffold19142 |
29110 |
29776 |
- |
Copia-48_ST-I |
LTR/Copia |
| scaffold19142 |
30069 |
30110 |
+ |
(ATT)n |
Simple_repeat |
| scaffold19142 |
30111 |
30145 |
+ |
(TGT)n |
Simple_repeat |
| scaffold19142 |
30152 |
30182 |
+ |
(GA)n |
Simple_repeat |
| scaffold19142 |
30325 |
30868 |
+ |
PL799 |
Unspecified |
| scaffold19142 |
32141 |
32550 |
+ |
RS626 |
Unspecified |
| scaffold19142 |
32473 |
32636 |
- |
RS3439 |
Unspecified |
| scaffold19142 |
32626 |
32814 |
+ |
RS509 |
Unspecified |
| scaffold19142 |
32647 |
32814 |
+ |
RS2719 |
Unspecified |
| scaffold19142 |
32814 |
33007 |
- |
RS3439 |
Unspecified |
| scaffold19142 |
33088 |
33117 |
+ |
(ACCCGA)n |
Simple_repeat |
| scaffold19142 |
33293 |
33349 |
+ |
(CAATTT)n |
Simple_repeat |
| scaffold19142 |
33732 |
33779 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold19142 |
34002 |
34022 |
+ |
(T)n |
Simple_repeat |
| scaffold19142 |
34144 |
34316 |
+ |
(ATAATT)n |
Simple_repeat |
| scaffold19142 |
34144 |
34188 |
+ |
(ATAATT)n |
Simple_repeat |
| scaffold19142 |
34176 |
34316 |
- |
RS1090 |
Unspecified |
| scaffold19142 |
34303 |
34415 |
+ |
PL563 |
Unspecified |
| scaffold19142 |
34417 |
34572 |
- |
PL926 |
Unspecified |
| scaffold19142 |
34791 |
34836 |
- |
RS1921 |
Unspecified |
| scaffold19142 |
35318 |
35361 |
+ |
(TGAAC)n |
Simple_repeat |
| scaffold19142 |
35362 |
35377 |
+ |
(TTGAA)n |
Simple_repeat |
| scaffold19142 |
35389 |
35467 |
+ |
(ACTGA)n |
Simple_repeat |
| scaffold19142 |
36279 |
36352 |
+ |
(ATA)n |
Simple_repeat |
| scaffold19142 |
36670 |
36698 |
+ |
(T)n |
Simple_repeat |
| scaffold19142 |
37650 |
37857 |
+ |
RS9372 |
Unspecified |
| scaffold19142 |
37847 |
38380 |
+ |
RS3552 |
Unspecified |
| scaffold19142 |
38194 |
38626 |
+ |
RS2650 |
Unspecified |
| scaffold19142 |
39141 |
39183 |
+ |
(TTAA)n |
Simple_repeat |