scaffold19899 Repeat List
genome |
start |
end |
strand |
repeat-name |
repeat-class |
scaffold19899 |
338 |
405 |
+ |
(TTTAATA)n |
Simple_repeat |
scaffold19899 |
650 |
710 |
+ |
(CTTCTTT)n |
Simple_repeat |
scaffold19899 |
2000 |
2737 |
- |
Gypsy-26_ST-I |
LTR/Gypsy |
scaffold19899 |
3136 |
3189 |
+ |
A-rich |
Low_complexity |
scaffold19899 |
3559 |
3659 |
- |
RS57 |
Unspecified |
scaffold19899 |
3580 |
3966 |
+ |
RS902 |
Unspecified |
scaffold19899 |
3765 |
4757 |
- |
PL66 |
Unspecified |
scaffold19899 |
4818 |
4885 |
+ |
Gypsy-13_TA-I |
LTR/Gypsy |
scaffold19899 |
5059 |
5092 |
+ |
(TTTTAC)n |
Simple_repeat |
scaffold19899 |
5271 |
5369 |
+ |
A-rich |
Low_complexity |
scaffold19899 |
5603 |
5717 |
+ |
(AAC)n |
Simple_repeat |
scaffold19899 |
5790 |
5822 |
+ |
(TCC)n |
Simple_repeat |
scaffold19899 |
6086 |
6117 |
+ |
(CT)n |
Simple_repeat |
scaffold19899 |
6194 |
6288 |
- |
RS3286 |
Unspecified |
scaffold19899 |
6569 |
7309 |
- |
PL344 |
Unspecified |
scaffold19899 |
7388 |
7434 |
+ |
A-rich |
Low_complexity |
scaffold19899 |
8151 |
8195 |
+ |
(AATAGTG)n |
Simple_repeat |
scaffold19899 |
8624 |
9342 |
- |
RS39 |
Unspecified |
scaffold19899 |
8859 |
9822 |
- |
RS57 |
Unspecified |
scaffold19899 |
9821 |
9894 |
+ |
PL736 |
Unspecified |
scaffold19899 |
9929 |
9989 |
+ |
(AATCTTT)n |
Simple_repeat |
scaffold19899 |
9999 |
10036 |
+ |
(ATAAC)n |
Simple_repeat |
scaffold19899 |
10104 |
10140 |
+ |
(TAT)n |
Simple_repeat |
scaffold19899 |
10215 |
10531 |
- |
RS4686 |
Unspecified |
scaffold19899 |
10612 |
11448 |
+ |
RS514 |
Unspecified |
scaffold19899 |
10998 |
11597 |
+ |
PL445 |
Unspecified |
scaffold19899 |
11068 |
11789 |
- |
PL920 |
Unspecified |
scaffold19899 |
11862 |
11943 |
+ |
PL864 |
Unspecified |
scaffold19899 |
11942 |
12140 |
+ |
PL951 |
Unspecified |
scaffold19899 |
11991 |
12409 |
+ |
PL839 |
Unspecified |
scaffold19899 |
12062 |
12600 |
+ |
PL969 |
Unspecified |
scaffold19899 |
12597 |
12645 |
+ |
(AATAA)n |
Simple_repeat |
scaffold19899 |
12696 |
12752 |
+ |
(TTTTTAG)n |
Simple_repeat |
scaffold19899 |
12911 |
12959 |
+ |
A-rich |
Low_complexity |
scaffold19899 |
12973 |
13023 |
+ |
(ATGAAC)n |
Simple_repeat |
scaffold19899 |
13218 |
13280 |
+ |
(ATATTTTA)n |
Simple_repeat |
scaffold19899 |
13483 |
13595 |
+ |
PL369 |
Unspecified |
scaffold19899 |
14121 |
14345 |
+ |
(ATT)n |
Simple_repeat |
scaffold19899 |
14499 |
14546 |
+ |
A-rich |
Low_complexity |
scaffold19899 |
15063 |
15124 |
- |
RETROSAT5_I-int |
LTR/Gypsy |
scaffold19899 |
16664 |
16703 |
+ |
ATLINE2 |
LINE/L1 |
scaffold19899 |
16950 |
18146 |
+ |
LINE |
LINE(TransposonPSI) |
scaffold19899 |
17685 |
17749 |
+ |
L1-9_GM |
LINE/L1 |
scaffold19899 |
17947 |
18105 |
+ |
SHALINE12_MT |
LINE/L1 |
scaffold19899 |
18148 |
18439 |
+ |
L1-15_GM |
LINE/L1 |
scaffold19899 |
18658 |
18693 |
+ |
LINE1-42_ZM |
LINE/L1 |
scaffold19899 |
18663 |
18811 |
+ |
L1-6_STu |
LINE/L1 |
scaffold19899 |
19395 |
19747 |
- |
RS766 |
Unspecified |
scaffold19899 |
19777 |
19856 |
+ |
(AATTAA)n |
Simple_repeat |
scaffold19899 |
20298 |
20372 |
+ |
(TAACATA)n |
Simple_repeat |
scaffold19899 |
24124 |
24184 |
+ |
(AATCAAT)n |
Simple_repeat |
scaffold19899 |
24323 |
24356 |
+ |
A-rich |
Low_complexity |
scaffold19899 |
25744 |
25778 |
+ |
ATRAN |
DNA? |
scaffold19899 |
25904 |
26011 |
- |
RS1220 |
Unspecified |
scaffold19899 |
26159 |
26193 |
+ |
ATRAN |
DNA? |
scaffold19899 |
26570 |
26602 |
+ |
A-rich |
Low_complexity |
scaffold19899 |
27179 |
27222 |
+ |
(CCGCC)n |
Simple_repeat |
scaffold19899 |
27297 |
27339 |
+ |
(AATTTT)n |
Simple_repeat |
scaffold19899 |
27475 |
27660 |
- |
PL704 |
Unspecified |
scaffold19899 |
28448 |
28488 |
+ |
(TGTTTT)n |
Simple_repeat |
scaffold19899 |
29583 |
29866 |
+ |
ATHILA-2_SBi-I |
LTR/Gypsy |
scaffold19899 |
30285 |
30345 |
+ |
ATHILA-2_SBi-I |
LTR/Gypsy |
scaffold19899 |
31013 |
31059 |
+ |
(TTTTGT)n |
Simple_repeat |
scaffold19899 |
31938 |
31989 |
+ |
(ATGAA)n |
Simple_repeat |
scaffold19899 |
32004 |
32458 |
- |
PL326 |
Unspecified |
scaffold19899 |
34010 |
34043 |
+ |
(TGCTT)n |
Simple_repeat |
scaffold19899 |
34866 |
35057 |
- |
RS201 |
Unspecified |
scaffold19899 |
38772 |
39067 |
+ |
EnSpm-2_STu |
DNA/CMC-EnSpm |
scaffold19899 |
39223 |
39386 |
+ |
(CGA)n |
Simple_repeat |
scaffold19899 |
39384 |
39741 |
- |
RS2480 |
Unspecified |
scaffold19899 |
39742 |
39763 |
+ |
(TTA)n |
Simple_repeat |
scaffold19899 |
39764 |
39792 |
+ |
(AT)n |
Simple_repeat |
scaffold19899 |
39793 |
39812 |
+ |
(TTA)n |
Simple_repeat |
scaffold19899 |
42129 |
42163 |
+ |
(TTAT)n |
Simple_repeat |
scaffold19899 |
43573 |
43611 |
+ |
A-rich |
Low_complexity |
scaffold19899 |
43847 |
43866 |
+ |
(A)n |
Simple_repeat |
scaffold19899 |
44711 |
44755 |
+ |
(CAGTT)n |
Simple_repeat |
scaffold19899 |
45951 |
46144 |
- |
RS11228 |
Unspecified |
scaffold19899 |
46160 |
46193 |
+ |
(A)n |
Simple_repeat |
scaffold19899 |
47523 |
47566 |
+ |
A-rich |
Low_complexity |
scaffold19899 |
50657 |
50713 |
+ |
(T)n |
Simple_repeat |
scaffold19899 |
50940 |
50963 |
+ |
(TCACG)n |
Simple_repeat |
scaffold19899 |
51358 |
51376 |
+ |
(A)n |
Simple_repeat |
scaffold19899 |
51590 |
52183 |
- |
PL117 |
Unspecified |
scaffold19899 |
52470 |
52491 |
+ |
(TTA)n |
Simple_repeat |
scaffold19899 |
52492 |
52517 |
+ |
(TTTTAT)n |
Simple_repeat |
scaffold19899 |
53120 |
53192 |
+ |
(TTG)n |
Simple_repeat |
scaffold19899 |
53307 |
53347 |
- |
RS17704 |
Unspecified |
scaffold19899 |
53313 |
53386 |
+ |
RS17065 |
Unspecified |
scaffold19899 |
55222 |
55333 |
+ |
RS726 |
Unspecified |
scaffold19899 |
57527 |
57655 |
+ |
Helitron-2_PTr |
RC/Helitron |
scaffold19899 |
61199 |
61300 |
- |
RS4153 |
Unspecified |
scaffold19899 |
67094 |
67110 |
+ |
(A)n |
Simple_repeat |
scaffold19899 |
67179 |
67210 |
+ |
(T)n |
Simple_repeat |
scaffold19899 |
67880 |
67915 |
+ |
(AATATT)n |
Simple_repeat |
scaffold19899 |
67939 |
67985 |
+ |
(ATTTAA)n |
Simple_repeat |
scaffold19899 |
68627 |
68670 |
+ |
A-rich |
Low_complexity |
scaffold19899 |
69142 |
69291 |
+ |
TNT1_LTR |
LTR/Copia |
scaffold19899 |
71433 |
71726 |
+ |
gypsy |
gypsy(TransposonPSI) |
scaffold19899 |
71463 |
71724 |
+ |
Gypsy-10_SB-I |
LTR/Gypsy |
scaffold19899 |
71792 |
71836 |
+ |
(AATTGA)n |
Simple_repeat |