scaffold2005 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold2005 |
556 |
725 |
+ |
Gypsy-38_Mad-I |
LTR/Gypsy |
| scaffold2005 |
819 |
866 |
+ |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold2005 |
2027 |
2375 |
+ |
(TACA)n |
Simple_repeat |
| scaffold2005 |
2392 |
2583 |
+ |
(CATA)n |
Simple_repeat |
| scaffold2005 |
2626 |
2675 |
+ |
(AAC)n |
Simple_repeat |
| scaffold2005 |
3462 |
3961 |
- |
PL368 |
Unspecified |
| scaffold2005 |
3605 |
3960 |
- |
RS5599 |
Unspecified |
| scaffold2005 |
4009 |
4289 |
+ |
Gypsy-47_Mad-I |
LTR/Gypsy |
| scaffold2005 |
4303 |
4352 |
+ |
Gypsy-38_Mad-LTR |
LTR/Gypsy |
| scaffold2005 |
4600 |
4717 |
- |
Novosib-6_CR |
DNA/Novosib |
| scaffold2005 |
7230 |
8071 |
+ |
RS77 |
Unspecified |
| scaffold2005 |
8120 |
8882 |
+ |
PL344 |
Unspecified |
| scaffold2005 |
8562 |
8951 |
+ |
RS2963 |
Unspecified |
| scaffold2005 |
8956 |
9029 |
+ |
ATCopia80_I-int |
LTR/Copia |
| scaffold2005 |
9568 |
9642 |
- |
RS8838 |
Unspecified |
| scaffold2005 |
9669 |
9736 |
+ |
(TGT)n |
Simple_repeat |
| scaffold2005 |
10382 |
10441 |
+ |
(AATTT)n |
Simple_repeat |
| scaffold2005 |
10508 |
10615 |
+ |
Gypsy-199_ZM-I |
LTR/Gypsy |
| scaffold2005 |
10974 |
10997 |
+ |
Copia-85_ST-I |
LTR/Copia |
| scaffold2005 |
10998 |
11064 |
+ |
ATGP5A_I-int |
LTR/Gypsy |
| scaffold2005 |
11065 |
11092 |
+ |
Copia-85_ST-I |
LTR/Copia |
| scaffold2005 |
11604 |
11711 |
+ |
Copia-83_PT-LTR |
LTR/Copia |
| scaffold2005 |
13181 |
13205 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold2005 |
13669 |
13984 |
- |
RS2985 |
Unspecified |
| scaffold2005 |
13808 |
14679 |
+ |
RS90 |
Unspecified |
| scaffold2005 |
14976 |
15083 |
+ |
Copia-83_PT-LTR |
LTR/Copia |
| scaffold2005 |
15204 |
15322 |
+ |
PL642 |
Unspecified |
| scaffold2005 |
15388 |
15494 |
+ |
PL827 |
Unspecified |
| scaffold2005 |
15437 |
15636 |
+ |
RS1717 |
Unspecified |
| scaffold2005 |
15588 |
15764 |
+ |
RS1717 |
Unspecified |
| scaffold2005 |
16110 |
16138 |
+ |
A-rich |
Low_complexity |
| scaffold2005 |
17101 |
17185 |
- |
Copia-83_PT-LTR |
LTR/Copia |
| scaffold2005 |
18405 |
18427 |
+ |
(CGTT)n |
Simple_repeat |
| scaffold2005 |
18989 |
19007 |
+ |
(T)n |
Simple_repeat |
| scaffold2005 |
20695 |
20746 |
+ |
(TGATGAA)n |
Simple_repeat |
| scaffold2005 |
25382 |
26022 |
- |
RS637 |
Unspecified |
| scaffold2005 |
26716 |
26834 |
+ |
(AAT)n |
Simple_repeat |
| scaffold2005 |
26996 |
27019 |
+ |
A-rich |
Low_complexity |
| scaffold2005 |
27020 |
27056 |
+ |
(AAT)n |
Simple_repeat |
| scaffold2005 |
27057 |
27117 |
+ |
A-rich |
Low_complexity |
| scaffold2005 |
27469 |
27560 |
+ |
RS14620 |
Unspecified |
| scaffold2005 |
27563 |
28232 |
- |
RS3120 |
Unspecified |
| scaffold2005 |
27616 |
28418 |
+ |
RS90 |
Unspecified |
| scaffold2005 |
30452 |
30848 |
+ |
Gypsy-38_Mad-I |
LTR/Gypsy |
| scaffold2005 |
31024 |
32258 |
+ |
Gypsy-38_Mad-I |
LTR/Gypsy |
| scaffold2005 |
32255 |
32375 |
+ |
PL111 |
Unspecified |
| scaffold2005 |
54054 |
54208 |
+ |
RS1648 |
Unspecified |