scaffold20134 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold20134 |
1 |
268 |
+ |
RIRE1_I-int |
LTR/Copia |
| scaffold20134 |
461 |
1996 |
+ |
RIRE1_I-int |
LTR/Copia |
| scaffold20134 |
2455 |
2567 |
+ |
RS9970 |
Unspecified |
| scaffold20134 |
2601 |
2652 |
+ |
RIRE1_I-int |
LTR/Copia |
| scaffold20134 |
3345 |
3363 |
+ |
(AC)n |
Simple_repeat |
| scaffold20134 |
3365 |
3406 |
+ |
(TGTA)n |
Simple_repeat |
| scaffold20134 |
5369 |
5601 |
- |
RS434 |
Unspecified |
| scaffold20134 |
6554 |
6648 |
+ |
(TGTA)n |
Simple_repeat |
| scaffold20134 |
6893 |
6942 |
+ |
GA-rich |
Low_complexity |
| scaffold20134 |
8783 |
9914 |
- |
RS3063 |
Unspecified |
| scaffold20134 |
9332 |
10141 |
- |
PL921 |
Unspecified |
| scaffold20134 |
9681 |
11080 |
- |
PL554 |
Unspecified |
| scaffold20134 |
11398 |
11432 |
+ |
(TTTTG)n |
Simple_repeat |
| scaffold20134 |
11594 |
11695 |
- |
RS813 |
Unspecified |
| scaffold20134 |
11707 |
12314 |
- |
Gypsy-26_VV-I |
LTR/Gypsy |
| scaffold20134 |
12561 |
12625 |
+ |
(TAATA)n |
Simple_repeat |
| scaffold20134 |
12736 |
12784 |
+ |
(ATA)n |
Simple_repeat |
| scaffold20134 |
12863 |
12936 |
+ |
(TCA)n |
Simple_repeat |
| scaffold20134 |
13687 |
13894 |
+ |
RS2906 |
Unspecified |
| scaffold20134 |
13735 |
13973 |
+ |
RS8989 |
Unspecified |
| scaffold20134 |
14731 |
14762 |
+ |
(GTT)n |
Simple_repeat |
| scaffold20134 |
15209 |
15923 |
+ |
RS1315 |
Unspecified |
| scaffold20134 |
15935 |
16413 |
- |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold20134 |
16678 |
17046 |
- |
Gypsy2-SB_I-int |
LTR/Gypsy |
| scaffold20134 |
17108 |
18487 |
- |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold20134 |
18674 |
18743 |
+ |
(TGTTTTT)n |
Simple_repeat |
| scaffold20134 |
18916 |
18939 |
+ |
(TTC)n |
Simple_repeat |
| scaffold20134 |
18950 |
18986 |
+ |
(GAGCTGCTT)n |
Simple_repeat |
| scaffold20134 |
19087 |
19179 |
- |
Gypsy-29_VV-I |
LTR/Gypsy |
| scaffold20134 |
19939 |
20021 |
- |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold20134 |
20934 |
21523 |
+ |
PL956 |
Unspecified |
| scaffold20134 |
21525 |
21627 |
+ |
PL935 |
Unspecified |
| scaffold20134 |
22157 |
22203 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold20134 |
22737 |
22763 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold20134 |
22918 |
23341 |
- |
PL405 |
Unspecified |
| scaffold20134 |
23829 |
24012 |
+ |
RS13321 |
Unspecified |
| scaffold20134 |
24378 |
25324 |
+ |
Copia7-ZM_I-int |
LTR/Copia |
| scaffold20134 |
28862 |
29253 |
- |
RS420 |
Unspecified |
| scaffold20134 |
28908 |
29252 |
+ |
RS4409 |
Unspecified |
| scaffold20134 |
29252 |
30733 |
- |
RS51 |
Unspecified |
| scaffold20134 |
29838 |
31513 |
+ |
PL647 |
Unspecified |
| scaffold20134 |
31513 |
31551 |
+ |
(ATTTCA)n |
Simple_repeat |
| scaffold20134 |
32493 |
32921 |
- |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold20134 |
33607 |
33967 |
- |
RS135 |
Unspecified |
| scaffold20134 |
34452 |
34577 |
- |
RS5586 |
Unspecified |
| scaffold20134 |
34510 |
34839 |
- |
RS5026 |
Unspecified |
| scaffold20134 |
34578 |
34829 |
- |
RS5026 |
Unspecified |
| scaffold20134 |
34728 |
35020 |
- |
RS4077 |
Unspecified |
| scaffold20134 |
34847 |
35115 |
+ |
RS3705 |
Unspecified |
| scaffold20134 |
34938 |
35270 |
+ |
RS2472 |
Unspecified |
| scaffold20134 |
35725 |
36552 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold20134 |
35738 |
36037 |
+ |
Copia-71_VV-I |
LTR/Copia |
| scaffold20134 |
36136 |
36307 |
+ |
Copia-71_VV-I |
LTR/Copia |
| scaffold20134 |
36656 |
37111 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |