scaffold20246 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold20246 |
189 |
1194 |
- |
RS3301 |
Unspecified |
| scaffold20246 |
1458 |
1741 |
- |
RS11630 |
Unspecified |
| scaffold20246 |
2474 |
2560 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold20246 |
2482 |
2520 |
+ |
A-rich |
Low_complexity |
| scaffold20246 |
2535 |
2665 |
- |
RS8157 |
Unspecified |
| scaffold20246 |
5107 |
5205 |
- |
ATCopia62_I-int |
LTR/Copia |
| scaffold20246 |
5459 |
5735 |
- |
RS7651 |
Unspecified |
| scaffold20246 |
6094 |
6123 |
+ |
(CCTTT)n |
Simple_repeat |
| scaffold20246 |
6126 |
6370 |
+ |
RS15891 |
Unspecified |
| scaffold20246 |
6397 |
6654 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold20246 |
6800 |
6826 |
+ |
(A)n |
Simple_repeat |
| scaffold20246 |
6991 |
7145 |
- |
RS94 |
Unspecified |
| scaffold20246 |
7199 |
7311 |
+ |
(ATTTTT)n |
Simple_repeat |
| scaffold20246 |
7687 |
7721 |
+ |
(T)n |
Simple_repeat |
| scaffold20246 |
7772 |
7895 |
+ |
G-rich |
Low_complexity |
| scaffold20246 |
8129 |
8207 |
- |
RS2637 |
Unspecified |
| scaffold20246 |
8231 |
8720 |
- |
RS13658 |
Unspecified |
| scaffold20246 |
8788 |
8826 |
+ |
G-rich |
Low_complexity |
| scaffold20246 |
9908 |
9953 |
- |
Copia10-VV_LTR |
LTR/Copia |
| scaffold20246 |
10588 |
11143 |
- |
RS3121 |
Unspecified |
| scaffold20246 |
11149 |
11209 |
+ |
RS14787 |
Unspecified |
| scaffold20246 |
11246 |
11355 |
- |
RS1578 |
Unspecified |
| scaffold20246 |
11359 |
11430 |
- |
RS14787 |
Unspecified |
| scaffold20246 |
11464 |
11517 |
- |
RS7618 |
Unspecified |
| scaffold20246 |
11527 |
11567 |
+ |
(AATTTAG)n |
Simple_repeat |
| scaffold20246 |
12216 |
12261 |
+ |
(T)n |
Simple_repeat |
| scaffold20246 |
12567 |
12608 |
+ |
A-rich |
Low_complexity |
| scaffold20246 |
12818 |
12837 |
+ |
(TA)n |
Simple_repeat |
| scaffold20246 |
17974 |
18009 |
+ |
A-rich |
Low_complexity |
| scaffold20246 |
18205 |
18235 |
+ |
(AATC)n |
Simple_repeat |
| scaffold20246 |
18755 |
18781 |
+ |
(AATG)n |
Simple_repeat |
| scaffold20246 |
18933 |
18987 |
+ |
(ATTAAT)n |
Simple_repeat |
| scaffold20246 |
19930 |
19972 |
+ |
A-rich |
Low_complexity |
| scaffold20246 |
20561 |
20792 |
+ |
RS782 |
Unspecified |
| scaffold20246 |
20953 |
20995 |
- |
RS219 |
Unspecified |
| scaffold20246 |
21287 |
21328 |
+ |
(A)n |
Simple_repeat |
| scaffold20246 |
27053 |
27105 |
+ |
RS15944 |
Unspecified |
| scaffold20246 |
27061 |
27105 |
- |
RS12444 |
Unspecified |
| scaffold20246 |
28052 |
28100 |
+ |
GA-rich |
Low_complexity |
| scaffold20246 |
28238 |
28320 |
+ |
GA-rich |
Low_complexity |
| scaffold20246 |
31906 |
31947 |
+ |
(CGAGTCC)n |
Simple_repeat |
| scaffold20246 |
32049 |
32179 |
- |
RS6713 |
Unspecified |
| scaffold20246 |
32063 |
32179 |
- |
RS41 |
Unspecified |
| scaffold20246 |
32289 |
32435 |
+ |
(T)n |
Simple_repeat |
| scaffold20246 |
32297 |
32389 |
+ |
PL380 |
Unspecified |
| scaffold20246 |
32405 |
32435 |
+ |
(T)n |
Simple_repeat |
| scaffold20246 |
32844 |
33002 |
+ |
RS620 |
Unspecified |
| scaffold20246 |
33754 |
33777 |
+ |
(TATAT)n |
Simple_repeat |
| scaffold20246 |
36743 |
36792 |
- |
CACTA_LP |
DNA/CMC-EnSpm |
| scaffold20246 |
36763 |
36814 |
- |
Copia-143_SB-I |
LTR/Copia |
| scaffold20246 |
36793 |
36805 |
+ |
ATCopia24I |
LTR/Copia |
| scaffold20246 |
37765 |
37839 |
+ |
(AAGTTTTCTG)n |
Simple_repeat |
| scaffold20246 |
39750 |
39997 |
+ |
RS193 |
Unspecified |
| scaffold20246 |
40600 |
40614 |
+ |
(CAA)n |
Simple_repeat |
| scaffold20246 |
40615 |
40639 |
+ |
(A)n |
Simple_repeat |
| scaffold20246 |
40640 |
40658 |
+ |
(CAA)n |
Simple_repeat |
| scaffold20246 |
40743 |
40809 |
+ |
(ATTTTG)n |
Simple_repeat |
| scaffold20246 |
42646 |
42674 |
+ |
(TGA)n |
Simple_repeat |
| scaffold20246 |
42997 |
43106 |
+ |
(CGA)n |
Simple_repeat |
| scaffold20246 |
46556 |
46589 |
+ |
(TTATAA)n |
Simple_repeat |
| scaffold20246 |
47851 |
47923 |
- |
RS549 |
Unspecified |
| scaffold20246 |
47952 |
47973 |
+ |
(A)n |
Simple_repeat |
| scaffold20246 |
47974 |
48009 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold20246 |
49251 |
49379 |
+ |
RS17891 |
Unspecified |
| scaffold20246 |
49271 |
49410 |
+ |
RS17 |
Unspecified |
| scaffold20246 |
49442 |
49550 |
+ |
RS11189 |
Unspecified |
| scaffold20246 |
49533 |
49584 |
- |
RS17600 |
Unspecified |
| scaffold20246 |
49546 |
49810 |
+ |
RS17600 |
Unspecified |
| scaffold20246 |
49808 |
49892 |
+ |
RS11189 |
Unspecified |
| scaffold20246 |
50846 |
50921 |
- |
RS882 |
Unspecified |
| scaffold20246 |
50929 |
51014 |
- |
RS4475 |
Unspecified |
| scaffold20246 |
51433 |
51459 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold20246 |
54813 |
54889 |
- |
Copia-108_BRa-I |
LTR/Copia |
| scaffold20246 |
56967 |
57000 |
+ |
(CAA)n |
Simple_repeat |
| scaffold20246 |
57005 |
57106 |
- |
SINE2-1_PD |
SINE/tRNA-RTE |
| scaffold20246 |
57961 |
58047 |
- |
RS17 |
Unspecified |
| scaffold20246 |
58313 |
58558 |
- |
RS193 |
Unspecified |
| scaffold20246 |
58630 |
58798 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold20246 |
59200 |
59311 |
+ |
(CTTCT)n |
Simple_repeat |
| scaffold20246 |
59326 |
59816 |
+ |
RS1781 |
Unspecified |
| scaffold20246 |
59744 |
60071 |
+ |
RS1716 |
Unspecified |
| scaffold20246 |
60215 |
60287 |
+ |
(TTAGGA)n |
Simple_repeat |
| scaffold20246 |
60342 |
60378 |
+ |
(CAA)n |
Simple_repeat |
| scaffold20246 |
60385 |
60409 |
+ |
(CTT)n |
Simple_repeat |
| scaffold20246 |
64868 |
64899 |
+ |
(T)n |
Simple_repeat |
| scaffold20246 |
65319 |
65449 |
+ |
RS8157 |
Unspecified |
| scaffold20246 |
66105 |
66388 |
+ |
RS11630 |
Unspecified |
| scaffold20246 |
67393 |
67419 |
+ |
(T)n |
Simple_repeat |
| scaffold20246 |
67443 |
67783 |
+ |
RS6061 |
Unspecified |
| scaffold20246 |
68428 |
69113 |
+ |
RS3301 |
Unspecified |
| scaffold20246 |
69448 |
69528 |
+ |
RS3301 |
Unspecified |
| scaffold20246 |
70009 |
70184 |
- |
RS13085 |
Unspecified |