scaffold2026 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold2026 |
5937 |
6007 |
+ |
(TT)n |
Simple_repeat |
| scaffold2026 |
6247 |
6571 |
+ |
PL301 |
Unspecified |
| scaffold2026 |
6382 |
6580 |
- |
PL473 |
Unspecified |
| scaffold2026 |
8757 |
8803 |
+ |
(TCATTT)n |
Simple_repeat |
| scaffold2026 |
8965 |
9168 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold2026 |
9074 |
9189 |
+ |
MIDWAY |
DNA/hAT-Tip100 |
| scaffold2026 |
9798 |
9873 |
+ |
(ATA)n |
Simple_repeat |
| scaffold2026 |
9850 |
9873 |
+ |
(ATA)n |
Simple_repeat |
| scaffold2026 |
10135 |
10179 |
+ |
L1-15_GM |
LINE/L1 |
| scaffold2026 |
14396 |
14512 |
- |
Copia-4_SL-LTR |
LTR/Copia |
| scaffold2026 |
15311 |
15460 |
- |
PL368 |
Unspecified |
| scaffold2026 |
15494 |
15524 |
+ |
(T)n |
Simple_repeat |
| scaffold2026 |
17532 |
17570 |
+ |
GA-rich |
Low_complexity |
| scaffold2026 |
18376 |
18959 |
+ |
Gypsy-36_BD-I |
LTR/Gypsy |
| scaffold2026 |
19661 |
19722 |
+ |
(TTCAT)n |
Simple_repeat |
| scaffold2026 |
19853 |
19887 |
+ |
(GTT)n |
Simple_repeat |
| scaffold2026 |
19905 |
20093 |
+ |
(TTG)n |
Simple_repeat |
| scaffold2026 |
20161 |
20184 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold2026 |
20161 |
20315 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold2026 |
20181 |
20349 |
+ |
(TC)n |
Simple_repeat |
| scaffold2026 |
20311 |
20349 |
+ |
(TC)n |
Simple_repeat |
| scaffold2026 |
20350 |
20397 |
+ |
MICROPON-LIKE-1 |
Unknown |
| scaffold2026 |
20626 |
20793 |
+ |
(TTTTTTA)n |
Simple_repeat |
| scaffold2026 |
20685 |
20793 |
+ |
(TTTTTTA)n |
Simple_repeat |
| scaffold2026 |
21121 |
21297 |
- |
RS12602 |
Unspecified |
| scaffold2026 |
21798 |
21913 |
- |
RS9980 |
Unspecified |
| scaffold2026 |
21857 |
22308 |
- |
RS6979 |
Unspecified |
| scaffold2026 |
22204 |
22471 |
- |
RS6032 |
Unspecified |
| scaffold2026 |
22505 |
22789 |
- |
RS8843 |
Unspecified |
| scaffold2026 |
22703 |
22968 |
+ |
RS938 |
Unspecified |
| scaffold2026 |
23221 |
23297 |
+ |
RS2614 |
Unspecified |
| scaffold2026 |
23305 |
23374 |
+ |
RS3480 |
Unspecified |
| scaffold2026 |
23370 |
23589 |
+ |
RS2614 |
Unspecified |
| scaffold2026 |
23761 |
23929 |
- |
RS3930 |
Unspecified |
| scaffold2026 |
25514 |
25798 |
- |
RS8843 |
Unspecified |
| scaffold2026 |
25881 |
26064 |
+ |
RS938 |
Unspecified |
| scaffold2026 |
26190 |
26387 |
- |
RS3930 |
Unspecified |
| scaffold2026 |
27003 |
27135 |
+ |
PL922 |
Unspecified |
| scaffold2026 |
27058 |
27157 |
- |
RS231 |
Unspecified |
| scaffold2026 |
27503 |
27530 |
+ |
(TA)n |
Simple_repeat |
| scaffold2026 |
29458 |
29486 |
+ |
(TA)n |
Simple_repeat |
| scaffold2026 |
29708 |
29732 |
+ |
(AG)n |
Simple_repeat |
| scaffold2026 |
30042 |
30572 |
+ |
PL470 |
Unspecified |
| scaffold2026 |
30631 |
30785 |
- |
RS796 |
Unspecified |
| scaffold2026 |
32211 |
32258 |
+ |
(TCAA)n |
Simple_repeat |
| scaffold2026 |
32747 |
32879 |
- |
SABRINA_SC-int |
LTR/Gypsy |
| scaffold2026 |
32846 |
32904 |
- |
Gypsy18-PTR_I-int |
LTR/Gypsy |
| scaffold2026 |
33667 |
33730 |
- |
Gypsy18-PTR_I-int |
LTR/Gypsy |
| scaffold2026 |
33760 |
33928 |
+ |
RS13703 |
Unspecified |
| scaffold2026 |
34019 |
34168 |
- |
RS13943 |
Unspecified |
| scaffold2026 |
34263 |
34451 |
+ |
RS17140 |
Unspecified |
| scaffold2026 |
34763 |
34799 |
+ |
(GGT)n |
Simple_repeat |
| scaffold2026 |
35556 |
35733 |
- |
RS1028 |
Unspecified |
| scaffold2026 |
36169 |
36418 |
- |
Gypsy1-PTR_I-int |
LTR/Gypsy |
| scaffold2026 |
36681 |
36732 |
+ |
(AACAAGT)n |
Simple_repeat |
| scaffold2026 |
36761 |
36802 |
- |
POPGY1_I-int |
LTR/Gypsy |
| scaffold2026 |
36803 |
36843 |
- |
Gypsy1-PTR_I-int |
LTR/Gypsy |
| scaffold2026 |
37179 |
37511 |
- |
RS1117 |
Unspecified |
| scaffold2026 |
37565 |
37706 |
- |
RS9104 |
Unspecified |
| scaffold2026 |
37620 |
37840 |
- |
RS155 |
Unspecified |
| scaffold2026 |
41700 |
41752 |
+ |
(AACAA)n |
Simple_repeat |
| scaffold2026 |
43348 |
43800 |
+ |
RS3764 |
Unspecified |
| scaffold2026 |
44314 |
45480 |
- |
RS3346 |
Unspecified |
| scaffold2026 |
45807 |
46270 |
+ |
RS5460 |
Unspecified |
| scaffold2026 |
46498 |
46569 |
+ |
(GTATTA)n |
Simple_repeat |
| scaffold2026 |
46570 |
46621 |
+ |
(TAG)n |
Simple_repeat |
| scaffold2026 |
46622 |
46737 |
+ |
(GTATTA)n |
Simple_repeat |
| scaffold2026 |
47742 |
47827 |
+ |
EnSpm-3_STu |
DNA/CMC-EnSpm |
| scaffold2026 |
47828 |
48167 |
- |
RS2144 |
Unspecified |
| scaffold2026 |
48230 |
48267 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold2026 |
48546 |
48938 |
+ |
RS1010 |
Unspecified |
| scaffold2026 |
48871 |
48978 |
- |
RS1010 |
Unspecified |
| scaffold2026 |
49307 |
49373 |
+ |
(CCAAC)n |
Simple_repeat |
| scaffold2026 |
49810 |
49830 |
+ |
(T)n |
Simple_repeat |
| scaffold2026 |
50203 |
50226 |
+ |
(A)n |
Simple_repeat |
| scaffold2026 |
50911 |
50952 |
+ |
Copia-10_TC-I |
LTR/Copia |
| scaffold2026 |
52228 |
52285 |
- |
BvL1-2 |
LINE/L1 |
| scaffold2026 |
52286 |
52300 |
+ |
Gypsy-32_Mad-LTR |
LTR/Gypsy |
| scaffold2026 |
52564 |
52621 |
+ |
(ATAATT)n |
Simple_repeat |
| scaffold2026 |
52792 |
52826 |
+ |
(ATTC)n |
Simple_repeat |
| scaffold2026 |
52823 |
52876 |
+ |
(TGATGAG)n |
Simple_repeat |
| scaffold2026 |
53100 |
53127 |
+ |
(CATT)n |
Simple_repeat |
| scaffold2026 |
53151 |
53174 |
+ |
(AATG)n |
Simple_repeat |
| scaffold2026 |
53414 |
53434 |
+ |
(T)n |
Simple_repeat |
| scaffold2026 |
54031 |
54114 |
+ |
PL105 |
Unspecified |
| scaffold2026 |
54789 |
55174 |
- |
RS2725 |
Unspecified |
| scaffold2026 |
55095 |
55351 |
+ |
TORTL1 |
LTR/Copia |
| scaffold2026 |
55381 |
55459 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold2026 |
56397 |
56747 |
+ |
RS148 |
Unspecified |
| scaffold2026 |
56927 |
57040 |
+ |
RS10172 |
Unspecified |
| scaffold2026 |
57041 |
57633 |
+ |
RS4084 |
Unspecified |
| scaffold2026 |
57452 |
57823 |
+ |
RS5634 |
Unspecified |
| scaffold2026 |
57935 |
58238 |
+ |
RS4185 |
Unspecified |
| scaffold2026 |
58283 |
58383 |
+ |
RS4739 |
Unspecified |
| scaffold2026 |
58398 |
58568 |
- |
hAT-17N1_ZM |
DNA/hAT-Ac |
| scaffold2026 |
58945 |
58986 |
+ |
GA-rich |
Low_complexity |
| scaffold2026 |
58990 |
59251 |
- |
PL37 |
Unspecified |
| scaffold2026 |
59324 |
59426 |
- |
RS1758 |
Unspecified |
| scaffold2026 |
59645 |
59697 |
+ |
(TTTC)n |
Simple_repeat |
| scaffold2026 |
59701 |
59880 |
- |
RS63 |
Unspecified |
| scaffold2026 |
60505 |
60565 |
+ |
(GATATCC)n |
Simple_repeat |
| scaffold2026 |
60712 |
60825 |
- |
RS5449 |
Unspecified |
| scaffold2026 |
61822 |
61855 |
+ |
(T)n |
Simple_repeat |
| scaffold2026 |
62167 |
62207 |
+ |
(CATCAT)n |
Simple_repeat |
| scaffold2026 |
62294 |
62320 |
+ |
(ATC)n |
Simple_repeat |
| scaffold2026 |
62321 |
62377 |
- |
Gypsy15-I_CR |
LTR/Gypsy |
| scaffold2026 |
64639 |
64667 |
+ |
A-rich |
Low_complexity |
| scaffold2026 |
64771 |
64792 |
+ |
(ATA)n |
Simple_repeat |
| scaffold2026 |
65071 |
65098 |
+ |
(A)n |
Simple_repeat |
| scaffold2026 |
67738 |
67759 |
+ |
(T)n |
Simple_repeat |
| scaffold2026 |
70365 |
70394 |
+ |
(AAGGG)n |
Simple_repeat |
| scaffold2026 |
70415 |
70730 |
- |
RS14906 |
Unspecified |
| scaffold2026 |
70746 |
70850 |
+ |
HADES_TA |
DNA/TcMar-Stowaway |
| scaffold2026 |
71448 |
71501 |
+ |
(ACAT)n |
Simple_repeat |
| scaffold2026 |
71811 |
71846 |
+ |
(TTCGGGT)n |
Simple_repeat |