scaffold2035 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold2035 |
18 |
247 |
+ |
L1-5_STu |
LINE/L1 |
| scaffold2035 |
1588 |
1606 |
+ |
(A)n |
Simple_repeat |
| scaffold2035 |
2412 |
2694 |
- |
RS1085 |
Unspecified |
| scaffold2035 |
2840 |
3033 |
- |
RS1085 |
Unspecified |
| scaffold2035 |
3030 |
3189 |
- |
RS1085 |
Unspecified |
| scaffold2035 |
3181 |
3451 |
+ |
RS266 |
Unspecified |
| scaffold2035 |
3606 |
3635 |
+ |
(AATTA)n |
Simple_repeat |
| scaffold2035 |
4220 |
4266 |
+ |
(A)n |
Simple_repeat |
| scaffold2035 |
4292 |
4363 |
- |
RS1000 |
Unspecified |
| scaffold2035 |
4575 |
4627 |
+ |
(TAAGAC)n |
Simple_repeat |
| scaffold2035 |
5318 |
5624 |
+ |
RS1085 |
Unspecified |
| scaffold2035 |
7133 |
7323 |
- |
PL609 |
Unspecified |
| scaffold2035 |
7133 |
7275 |
- |
RS280 |
Unspecified |
| scaffold2035 |
7422 |
7462 |
+ |
(TTC)n |
Simple_repeat |
| scaffold2035 |
7935 |
7980 |
+ |
A-rich |
Low_complexity |
| scaffold2035 |
9435 |
9573 |
+ |
A-rich |
Low_complexity |
| scaffold2035 |
12570 |
12627 |
+ |
MuDR-4_ZM |
DNA/MULE-MuDR |
| scaffold2035 |
15091 |
15120 |
+ |
(ACCC)n |
Simple_repeat |
| scaffold2035 |
15122 |
15146 |
+ |
(A)n |
Simple_repeat |
| scaffold2035 |
15813 |
16531 |
- |
PL363 |
Unspecified |
| scaffold2035 |
17404 |
17791 |
+ |
RS355 |
Unspecified |
| scaffold2035 |
17787 |
18648 |
+ |
RS355 |
Unspecified |
| scaffold2035 |
17971 |
18794 |
- |
RS294 |
Unspecified |
| scaffold2035 |
20186 |
20354 |
+ |
PL39 |
Unspecified |
| scaffold2035 |
20207 |
20723 |
- |
PL487 |
Unspecified |
| scaffold2035 |
20271 |
20862 |
- |
PL862 |
Unspecified |
| scaffold2035 |
20760 |
21223 |
+ |
PL334 |
Unspecified |
| scaffold2035 |
21226 |
21899 |
+ |
PL919 |
Unspecified |
| scaffold2035 |
21650 |
22183 |
+ |
RS1318 |
Unspecified |
| scaffold2035 |
22201 |
22228 |
+ |
(AGT)n |
Simple_repeat |
| scaffold2035 |
22559 |
22604 |
+ |
A-rich |
Low_complexity |
| scaffold2035 |
22772 |
22809 |
+ |
A-rich |
Low_complexity |
| scaffold2035 |
23219 |
23333 |
- |
Gypsy-13_TA-I |
LTR/Gypsy |
| scaffold2035 |
24460 |
24496 |
+ |
(ATCAACA)n |
Simple_repeat |
| scaffold2035 |
26294 |
26694 |
- |
PL578 |
Unspecified |
| scaffold2035 |
27020 |
27065 |
+ |
A-rich |
Low_complexity |
| scaffold2035 |
27159 |
27256 |
+ |
RS1330 |
Unspecified |
| scaffold2035 |
27257 |
27288 |
+ |
(TC)n |
Simple_repeat |
| scaffold2035 |
27322 |
27394 |
- |
RS3462 |
Unspecified |
| scaffold2035 |
27521 |
27559 |
+ |
A-rich |
Low_complexity |
| scaffold2035 |
27583 |
27677 |
+ |
(ACACAT)n |
Simple_repeat |
| scaffold2035 |
27846 |
27881 |
+ |
(TCACTC)n |
Simple_repeat |
| scaffold2035 |
27889 |
30519 |
- |
RS869 |
Unspecified |
| scaffold2035 |
30849 |
32407 |
+ |
RS200 |
Unspecified |
| scaffold2035 |
32403 |
32501 |
- |
RS238 |
Unspecified |
| scaffold2035 |
32499 |
33513 |
- |
RS249 |
Unspecified |
| scaffold2035 |
32615 |
33643 |
- |
RS238 |
Unspecified |
| scaffold2035 |
32794 |
35173 |
- |
RS27 |
Unspecified |
| scaffold2035 |
35513 |
36175 |
- |
PL706 |
Unspecified |
| scaffold2035 |
36696 |
36746 |
+ |
(ACAAGA)n |
Simple_repeat |
| scaffold2035 |
37156 |
39025 |
+ |
RS192 |
Unspecified |
| scaffold2035 |
39423 |
39542 |
+ |
RS192 |
Unspecified |
| scaffold2035 |
39556 |
39605 |
+ |
Gypsy-10_Pru-LTR |
LTR/Gypsy |
| scaffold2035 |
40236 |
41074 |
- |
RS288 |
Unspecified |
| scaffold2035 |
41503 |
41582 |
- |
WHAM2_TM-int |
LTR/Gypsy |
| scaffold2035 |
42128 |
42202 |
+ |
(TTTCTTT)n |
Simple_repeat |
| scaffold2035 |
43372 |
43461 |
- |
Gypsy-14_ST-I |
LTR/Gypsy |
| scaffold2035 |
43895 |
43985 |
- |
Copia-10_TC-I |
LTR/Copia |
| scaffold2035 |
43919 |
44970 |
- |
WHAM2_TM-int |
LTR/Gypsy |
| scaffold2035 |
43919 |
43995 |
- |
WHAM2_TM-int |
LTR/Gypsy |
| scaffold2035 |
43985 |
44970 |
- |
RS260 |
Unspecified |
| scaffold2035 |
45569 |
45756 |
+ |
PL911 |
Unspecified |
| scaffold2035 |
45975 |
46460 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold2035 |
57172 |
57212 |
+ |
(ACAAGCA)n |
Simple_repeat |