genome | start | end | strand | repeat-name | repeat-class |
---|---|---|---|---|---|
scaffold20744 | 652 | 905 | - | RS2985 | Unspecified |
scaffold20744 | 728 | 1022 | + | RS90 | Unspecified |
scaffold20744 | 1799 | 2607 | + | RS90 | Unspecified |
scaffold20744 | 3104 | 3262 | - | PL747 | Unspecified |
scaffold20744 | 3973 | 4001 | + | (TTCGT)n | Simple_repeat |
scaffold20744 | 4229 | 4795 | + | RS756 | Unspecified |
scaffold20744 | 5864 | 5971 | + | (TAA)n | Simple_repeat |
scaffold20744 | 5864 | 6126 | + | (TAA)n | Simple_repeat |
scaffold20744 | 5864 | 6098 | + | (TAA)n | Simple_repeat |
scaffold20744 | 5924 | 6126 | + | RS1323 | Unspecified |
scaffold20744 | 5930 | 6098 | + | RS1323 | Unspecified |
scaffold20744 | 6225 | 6263 | + | (TATCATA)n | Simple_repeat |
scaffold20744 | 6576 | 7002 | + | RS6485 | Unspecified |
scaffold20744 | 7419 | 7485 | + | (TATC)n | Simple_repeat |
scaffold20744 | 7534 | 7607 | + | (TTATT)n | Simple_repeat |
scaffold20744 | 9920 | 9948 | + | (TC)n | Simple_repeat |
scaffold20744 | 10176 | 10221 | + | (T)n | Simple_repeat |
scaffold20744 | 10259 | 10331 | - | RS17927 | Unspecified |
scaffold20744 | 10425 | 10531 | + | (AACTG)n | Simple_repeat |
scaffold20744 | 10810 | 10837 | + | (T)n | Simple_repeat |
scaffold20744 | 10852 | 10970 | + | RS1162 | Unspecified |
scaffold20744 | 11099 | 11141 | + | (ATTT)n | Simple_repeat |
scaffold20744 | 11748 | 11807 | + | (GCC)n | Simple_repeat |
scaffold20744 | 17006 | 17045 | + | (ATT)n | Simple_repeat |
scaffold20744 | 18163 | 18183 | + | (TTTA)n | Simple_repeat |
scaffold20744 | 19105 | 19368 | + | RS10 | Unspecified |
scaffold20744 | 19382 | 19889 | + | PL28 | Unspecified |
scaffold20744 | 20214 | 20281 | + | (TGGCTGG)n | Simple_repeat |
scaffold20744 | 20289 | 20318 | + | (T)n | Simple_repeat |
scaffold20744 | 20527 | 20721 | + | PL561 | Unspecified |
scaffold20744 | 20852 | 20894 | + | (CA)n | Simple_repeat |
scaffold20744 | 20931 | 20997 | + | (TTCTTT)n | Simple_repeat |
scaffold20744 | 20998 | 21026 | + | (TG)n | Simple_repeat |
scaffold20744 | 21477 | 21637 | + | RS915 | Unspecified |
scaffold20744 | 23102 | 23147 | + | (T)n | Simple_repeat |
scaffold20744 | 28763 | 28810 | + | A-rich | Low_complexity |
scaffold20744 | 29109 | 29226 | - | RS4475 | Unspecified |
scaffold20744 | 29119 | 29212 | + | RS16382 | Unspecified |
scaffold20744 | 29413 | 29741 | + | RS1110 | Unspecified |
scaffold20744 | 30052 | 30095 | + | (TTTATTA)n | Simple_repeat |
scaffold20744 | 30699 | 30858 | - | RS2782 | Unspecified |
scaffold20744 | 31129 | 31503 | + | Gypsy-16_Mad-I | LTR/Gypsy |
scaffold20744 | 32053 | 32101 | + | (ACCTCC)n | Simple_repeat |
scaffold20744 | 32525 | 33185 | + | Gypsy-16_Mad-I | LTR/Gypsy |
scaffold20744 | 33362 | 33562 | + | Gypsy18-PTR_I-int | LTR/Gypsy |
scaffold20744 | 35662 | 35842 | + | RS9304 | Unspecified |
scaffold20744 | 37504 | 37520 | + | (A)n | Simple_repeat |
scaffold20744 | 37920 | 37956 | + | (CCGTGT)n | Simple_repeat |
scaffold20744 | 38076 | 38467 | - | Copia-4_SL-LTR | LTR/Copia |
scaffold20744 | 38579 | 38773 | - | PL492 | Unspecified |
scaffold20744 | 38768 | 38916 | + | PL131 | Unspecified |
scaffold20744 | 41215 | 41260 | + | G-rich | Low_complexity |
scaffold20744 | 43106 | 43131 | + | (A)n | Simple_repeat |
scaffold20744 | 43165 | 43191 | + | A-rich | Low_complexity |
scaffold20744 | 43330 | 43392 | - | RS4 | Unspecified |
scaffold20744 | 43414 | 43479 | + | RS72 | Unspecified |
scaffold20744 | 43475 | 43537 | - | PL271 | Unspecified |
scaffold20744 | 44403 | 44520 | - | RS9258 | Unspecified |
scaffold20744 | 44982 | 45140 | - | RS72 | Unspecified |
scaffold20744 | 46618 | 46913 | - | RS3851 | Unspecified |
scaffold20744 | 47289 | 48734 | + | TY1_Copia | TY1_Copia(TransposonPSI) |
scaffold20744 | 48328 | 48392 | + | Copia-96_VV-I | LTR/Copia |
scaffold20744 | 48834 | 49690 | + | Copia-96_VV-I | LTR/Copia |
scaffold20744 | 50081 | 51650 | + | Copia-96_VV-I | LTR/Copia |
scaffold20744 | 51713 | 52008 | - | RS3851 | Unspecified |
scaffold20744 | 52137 | 52374 | - | RS4 | Unspecified |
scaffold20744 | 52705 | 52743 | + | (T)n | Simple_repeat |
scaffold20744 | 54434 | 54495 | + | A-rich | Low_complexity |
scaffold20744 | 57734 | 57756 | + | (TGT)n | Simple_repeat |
scaffold20744 | 58218 | 58234 | + | (CTC)n | Simple_repeat |
scaffold20744 | 59456 | 59631 | - | RS726 | Unspecified |
scaffold20744 | 59953 | 60015 | + | (TT)n | Simple_repeat |
scaffold20744 | 60093 | 60337 | - | RS148 | Unspecified |
scaffold20744 | 60335 | 60366 | + | RS18405 | Unspecified |
scaffold20744 | 60912 | 60940 | + | (A)n | Simple_repeat |
scaffold20744 | 61366 | 61421 | + | A-rich | Low_complexity |
scaffold20744 | 61704 | 61727 | + | (TTA)n | Simple_repeat |
scaffold20744 | 61856 | 61879 | + | (TATT)n | Simple_repeat |
scaffold20744 | 61880 | 61906 | + | (T)n | Simple_repeat |
scaffold20744 | 62058 | 62097 | + | (TTAA)n | Simple_repeat |
scaffold20744 | 62239 | 62272 | + | (TATT)n | Simple_repeat |
scaffold20744 | 62477 | 62609 | - | RS16382 | Unspecified |
scaffold20744 | 62697 | 62741 | + | (A)n | Simple_repeat |
scaffold20744 | 63293 | 63337 | + | GA-rich | Low_complexity |
scaffold20744 | 64687 | 65355 | + | TY1_Copia | TY1_Copia(TransposonPSI) |
scaffold20744 | 64948 | 65207 | + | GmCOPIA10_I-int | LTR/Copia |
scaffold20744 | 65339 | 65755 | + | TY1_Copia | TY1_Copia(TransposonPSI) |
scaffold20744 | 66241 | 66822 | + | TY1_Copia | TY1_Copia(TransposonPSI) |
scaffold20744 | 66964 | 67264 | + | TORTL1 | LTR/Copia |
scaffold20744 | 67435 | 68190 | + | Copia-104_GM-I | LTR/Copia |
scaffold20744 | 68235 | 68464 | + | RS7341 | Unspecified |
scaffold20744 | 71180 | 71453 | - | Ogre-VP1_I-int | LTR/Gypsy |
scaffold20744 | 71454 | 72109 | - | PL741 | Unspecified |
scaffold20744 | 72133 | 72177 | + | (ACTA)n | Simple_repeat |
scaffold20744 | 72207 | 72229 | + | (TG)n | Simple_repeat |
scaffold20744 | 72568 | 73056 | - | Ogre-VP1_I-int | LTR/Gypsy |
scaffold20744 | 73542 | 73763 | - | Atlantys1_I-int | LTR/Gypsy |
scaffold20744 | 73746 | 74136 | - | Gypsy-133_GM-I | LTR/Gypsy |
scaffold20744 | 74254 | 75467 | - | Gypsy-133_GM-I | LTR/Gypsy |
scaffold20744 | 74254 | 74984 | - | Gypsy-133_GM-I | LTR/Gypsy |
scaffold20744 | 74680 | 75490 | + | (TCGTCT)n | Simple_repeat |
scaffold20744 | 75457 | 75490 | + | (TCGTCT)n | Simple_repeat |
scaffold20744 | 76070 | 77125 | + | helitronORF | helitronORF(TransposonPSI) |
scaffold20744 | 76079 | 76273 | + | Helitron-1_GM | RC/Helitron |
scaffold20744 | 76395 | 76552 | + | Helitron-1_GM | RC/Helitron |
scaffold20744 | 77527 | 77911 | + | Helitron1_VV | RC/Helitron |
scaffold20744 | 78545 | 78732 | + | Helitron4 | RC/Helitron |
scaffold20744 | 78949 | 78989 | + | (ACTGAC)n | Simple_repeat |
scaffold20744 | 80715 | 80769 | + | (A)n | Simple_repeat |
scaffold20744 | 81530 | 81987 | + | PL2 | Unspecified |
scaffold20744 | 85625 | 85658 | + | (ACGGAC)n | Simple_repeat |
scaffold20744 | 85834 | 85930 | + | A-rich | Low_complexity |
scaffold20744 | 85953 | 85975 | + | (T)n | Simple_repeat |
scaffold20744 | 86097 | 86188 | - | hAT-9_SBi | DNA/hAT-Tag1 |
scaffold20744 | 86555 | 86753 | + | RS8631 | Unspecified |
scaffold20744 | 86863 | 86909 | + | (CGGTGG)n | Simple_repeat |
scaffold20744 | 87344 | 87404 | + | A-rich | Low_complexity |
scaffold20744 | 87840 | 87888 | + | (AATAA)n | Simple_repeat |
scaffold20744 | 88269 | 88317 | + | (TGAG)n | Simple_repeat |
scaffold20744 | 88315 | 88397 | + | A-rich | Low_complexity |
scaffold20744 | 88616 | 88663 | + | (ATATTT)n | Simple_repeat |
scaffold20744 | 88842 | 88882 | + | (CCGAT)n | Simple_repeat |
scaffold20744 | 89129 | 89161 | + | (TA)n | Simple_repeat |
scaffold20744 | 89841 | 90075 | - | RS6023 | Unspecified |
scaffold20744 | 90423 | 90469 | + | A-rich | Low_complexity |
scaffold20744 | 90950 | 91147 | + | RS14527 | Unspecified |
scaffold20744 | 91865 | 92102 | - | RS6023 | Unspecified |
scaffold20744 | 92632 | 92741 | + | RS11704 | Unspecified |
scaffold20744 | 93411 | 93475 | + | (AAC)n | Simple_repeat |
scaffold20744 | 93956 | 94658 | + | Mariner1_BV | DNA/TcMar-Stowaway |
scaffold20744 | 96630 | 96871 | - | RS4 | Unspecified |
scaffold20744 | 96866 | 96931 | + | (TTTTAA)n | Simple_repeat |
scaffold20744 | 98159 | 98229 | + | Gypsy-199_ZM-I | LTR/Gypsy |
scaffold20744 | 98900 | 98934 | + | A-rich | Low_complexity |
scaffold20744 | 99706 | 101373 | + | Gypsy-5_Pru-I | LTR/Gypsy |
scaffold20744 | 101888 | 102355 | + | TY1_Copia | TY1_Copia(TransposonPSI) |
scaffold20744 | 101996 | 102216 | + | Gypsy-5_TA-I | LTR/Gypsy |
scaffold20744 | 102269 | 102348 | + | Gypsy-5_TA-I | LTR/Gypsy |
scaffold20744 | 103130 | 103210 | + | Copia-85_ST-I | LTR/Copia |
scaffold20744 | 105422 | 105993 | + | RS1040 | Unspecified |
scaffold20744 | 107334 | 108348 | - | RS446 | Unspecified |
scaffold20744 | 109514 | 109548 | + | (CACAATT)n | Simple_repeat |
scaffold20744 | 113345 | 113455 | + | A-rich | Low_complexity |