scaffold21015 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold21015 |
1 |
247 |
+ |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold21015 |
336 |
1075 |
+ |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold21015 |
1218 |
2044 |
+ |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold21015 |
1998 |
2141 |
+ |
Ogre-MT3_I-int |
LTR/Gypsy |
| scaffold21015 |
3065 |
3084 |
+ |
(C)n |
Simple_repeat |
| scaffold21015 |
3770 |
3851 |
- |
PL111 |
Unspecified |
| scaffold21015 |
3844 |
6010 |
+ |
Copia-13_SB-I |
LTR/Copia |
| scaffold21015 |
7273 |
7371 |
+ |
(AATT)n |
Simple_repeat |
| scaffold21015 |
7828 |
7868 |
+ |
(TAATT)n |
Simple_repeat |
| scaffold21015 |
8209 |
8260 |
- |
Gypsy-3_Pru-I |
LTR/Gypsy |
| scaffold21015 |
8783 |
8968 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold21015 |
9115 |
9282 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold21015 |
9822 |
10293 |
- |
Gypsy-3_Pru-I |
LTR/Gypsy |
| scaffold21015 |
13156 |
13208 |
+ |
(GACCCA)n |
Simple_repeat |
| scaffold21015 |
13355 |
13376 |
+ |
(T)n |
Simple_repeat |
| scaffold21015 |
14512 |
15257 |
- |
LINE1I_MT |
LINE/L1 |
| scaffold21015 |
15562 |
15616 |
+ |
(AGACCC)n |
Simple_repeat |
| scaffold21015 |
18078 |
18114 |
+ |
(T)n |
Simple_repeat |
| scaffold21015 |
20122 |
20158 |
+ |
A-rich |
Low_complexity |
| scaffold21015 |
20249 |
20277 |
+ |
(A)n |
Simple_repeat |
| scaffold21015 |
20301 |
20896 |
- |
PL477 |
Unspecified |
| scaffold21015 |
20897 |
20945 |
+ |
GA-rich |
Low_complexity |
| scaffold21015 |
21272 |
21296 |
+ |
(T)n |
Simple_repeat |
| scaffold21015 |
22375 |
22409 |
+ |
(AAT)n |
Simple_repeat |
| scaffold21015 |
22648 |
22671 |
+ |
(T)n |
Simple_repeat |
| scaffold21015 |
23996 |
24016 |
+ |
(GAG)n |
Simple_repeat |
| scaffold21015 |
24324 |
24362 |
+ |
(TAT)n |
Simple_repeat |
| scaffold21015 |
24389 |
24428 |
+ |
(T)n |
Simple_repeat |
| scaffold21015 |
24487 |
24514 |
+ |
(T)n |
Simple_repeat |
| scaffold21015 |
25791 |
26051 |
+ |
RS82 |
Unspecified |
| scaffold21015 |
26126 |
26159 |
+ |
(TTCTAT)n |
Simple_repeat |
| scaffold21015 |
26184 |
26203 |
+ |
(A)n |
Simple_repeat |
| scaffold21015 |
26307 |
26834 |
- |
PL401 |
Unspecified |
| scaffold21015 |
29302 |
29368 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold21015 |
29590 |
29644 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold21015 |
30011 |
30034 |
+ |
(T)n |
Simple_repeat |
| scaffold21015 |
31451 |
31479 |
+ |
(AG)n |
Simple_repeat |
| scaffold21015 |
33878 |
33915 |
+ |
A-rich |
Low_complexity |
| scaffold21015 |
34437 |
34457 |
+ |
A-rich |
Low_complexity |
| scaffold21015 |
34458 |
34511 |
+ |
(TAATAA)n |
Simple_repeat |
| scaffold21015 |
34622 |
35199 |
- |
PL141 |
Unspecified |
| scaffold21015 |
35221 |
35244 |
+ |
(T)n |
Simple_repeat |
| scaffold21015 |
35681 |
35917 |
+ |
RS2135 |
Unspecified |
| scaffold21015 |
36004 |
36065 |
- |
ATCopia15I |
LTR/Copia |
| scaffold21015 |
36496 |
36558 |
- |
Copia15-PTR_I-int |
LTR/Copia |
| scaffold21015 |
36876 |
37009 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold21015 |
37642 |
37745 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold21015 |
37763 |
37806 |
+ |
(GTTGTA)n |
Simple_repeat |
| scaffold21015 |
38442 |
38496 |
+ |
GA-rich |
Low_complexity |
| scaffold21015 |
39125 |
39158 |
+ |
(ATCAAA)n |
Simple_repeat |
| scaffold21015 |
40503 |
40521 |
+ |
(T)n |
Simple_repeat |
| scaffold21015 |
40607 |
40662 |
+ |
(TTTTT)n |
Simple_repeat |
| scaffold21015 |
41165 |
41215 |
+ |
(TATTAAC)n |
Simple_repeat |
| scaffold21015 |
42477 |
42946 |
+ |
PL582 |
Unspecified |
| scaffold21015 |
43359 |
43520 |
+ |
RS1839 |
Unspecified |
| scaffold21015 |
43522 |
44647 |
- |
RS51 |
Unspecified |
| scaffold21015 |
44650 |
44724 |
+ |
(ATGCTG)n |
Simple_repeat |
| scaffold21015 |
44967 |
45127 |
- |
RS1146 |
Unspecified |
| scaffold21015 |
45364 |
45424 |
+ |
(GTTTGT)n |
Simple_repeat |
| scaffold21015 |
45651 |
45777 |
+ |
RS7258 |
Unspecified |