scaffold21143 Repeat List
genome |
start |
end |
strand |
repeat-name |
repeat-class |
scaffold21143 |
2 |
420 |
+ |
PL176 |
Unspecified |
scaffold21143 |
521 |
760 |
- |
RS1374 |
Unspecified |
scaffold21143 |
655 |
815 |
+ |
RS5262 |
Unspecified |
scaffold21143 |
963 |
1445 |
- |
RS852 |
Unspecified |
scaffold21143 |
1128 |
1694 |
+ |
RS5261 |
Unspecified |
scaffold21143 |
1750 |
2213 |
- |
RS2397 |
Unspecified |
scaffold21143 |
1934 |
2333 |
- |
PL903 |
Unspecified |
scaffold21143 |
2036 |
2341 |
- |
RS1583 |
Unspecified |
scaffold21143 |
2371 |
2494 |
- |
RS927 |
Unspecified |
scaffold21143 |
2571 |
2622 |
+ |
(TTTAT)n |
Simple_repeat |
scaffold21143 |
4582 |
4727 |
+ |
L1-9_Mad |
LINE/L1 |
scaffold21143 |
4907 |
5039 |
+ |
SHALINE10_MT |
LINE/L1 |
scaffold21143 |
5561 |
6758 |
+ |
SHALINE10_MT |
LINE/L1 |
scaffold21143 |
6832 |
7347 |
+ |
L1-9_Mad |
LINE/L1 |
scaffold21143 |
8020 |
8073 |
+ |
L1-2_ZM |
LINE/L1 |
scaffold21143 |
8297 |
8385 |
- |
RS254 |
Unspecified |
scaffold21143 |
11098 |
11151 |
+ |
(A)n |
Simple_repeat |
scaffold21143 |
11758 |
11809 |
+ |
Copia-3_PTri-I |
LTR/Copia |
scaffold21143 |
12635 |
12718 |
+ |
RS18111 |
Unspecified |
scaffold21143 |
13161 |
13452 |
+ |
RS1928 |
Unspecified |
scaffold21143 |
13923 |
14162 |
- |
RS145 |
Unspecified |
scaffold21143 |
14308 |
14330 |
+ |
(A)n |
Simple_repeat |
scaffold21143 |
14713 |
14988 |
+ |
RS1 |
Unspecified |
scaffold21143 |
15118 |
15138 |
+ |
(A)n |
Simple_repeat |
scaffold21143 |
15370 |
15516 |
- |
RS38 |
Unspecified |
scaffold21143 |
16635 |
16683 |
+ |
(TGAAGAT)n |
Simple_repeat |
scaffold21143 |
18597 |
18777 |
+ |
RS14290 |
Unspecified |
scaffold21143 |
20454 |
20591 |
+ |
RS17486 |
Unspecified |
scaffold21143 |
20707 |
20728 |
+ |
(A)n |
Simple_repeat |
scaffold21143 |
20834 |
20948 |
+ |
RS10838 |
Unspecified |
scaffold21143 |
21013 |
21124 |
+ |
RS18346 |
Unspecified |
scaffold21143 |
21307 |
21444 |
+ |
RS12745 |
Unspecified |
scaffold21143 |
21456 |
21483 |
+ |
(TCA)n |
Simple_repeat |
scaffold21143 |
22241 |
22332 |
+ |
RS4475 |
Unspecified |
scaffold21143 |
22263 |
22343 |
+ |
RS12885 |
Unspecified |
scaffold21143 |
22487 |
22626 |
+ |
RS10838 |
Unspecified |
scaffold21143 |
22722 |
22853 |
+ |
RS18346 |
Unspecified |
scaffold21143 |
22957 |
23201 |
- |
RS1166 |
Unspecified |
scaffold21143 |
23336 |
23475 |
+ |
RS10838 |
Unspecified |
scaffold21143 |
23581 |
23639 |
+ |
RS18346 |
Unspecified |
scaffold21143 |
23741 |
23801 |
- |
PIGY-I_PS |
LTR/Gypsy |
scaffold21143 |
23815 |
23875 |
+ |
RS18346 |
Unspecified |
scaffold21143 |
25197 |
25377 |
+ |
RS14290 |
Unspecified |
scaffold21143 |
26623 |
26674 |
+ |
(ATCTTT)n |
Simple_repeat |
scaffold21143 |
26950 |
27323 |
+ |
RS322 |
Unspecified |
scaffold21143 |
28277 |
28339 |
+ |
(TTTAATT)n |
Simple_repeat |
scaffold21143 |
28890 |
28931 |
+ |
A-rich |
Low_complexity |
scaffold21143 |
29054 |
29123 |
+ |
RS534 |
Unspecified |
scaffold21143 |
29245 |
29311 |
+ |
A-rich |
Low_complexity |
scaffold21143 |
29316 |
29453 |
+ |
RS17486 |
Unspecified |
scaffold21143 |
29497 |
29530 |
+ |
(TGTAGAA)n |
Simple_repeat |
scaffold21143 |
29612 |
29655 |
+ |
(TTTAG)n |
Simple_repeat |
scaffold21143 |
30572 |
30736 |
- |
RS4216 |
Unspecified |
scaffold21143 |
30755 |
31153 |
- |
RS3243 |
Unspecified |
scaffold21143 |
31349 |
31555 |
+ |
RS4635 |
Unspecified |
scaffold21143 |
32148 |
32263 |
- |
RS549 |
Unspecified |
scaffold21143 |
32297 |
32386 |
- |
RS145 |
Unspecified |
scaffold21143 |
32762 |
32799 |
+ |
(T)n |
Simple_repeat |
scaffold21143 |
32801 |
32872 |
+ |
(TTA)n |
Simple_repeat |
scaffold21143 |
33324 |
33357 |
+ |
A-rich |
Low_complexity |
scaffold21143 |
33910 |
34035 |
+ |
RS38 |
Unspecified |
scaffold21143 |
35683 |
35926 |
- |
RS145 |
Unspecified |
scaffold21143 |
36073 |
36101 |
+ |
(TAAAA)n |
Simple_repeat |
scaffold21143 |
36446 |
36463 |
+ |
(A)n |
Simple_repeat |
scaffold21143 |
36501 |
36537 |
+ |
(A)n |
Simple_repeat |
scaffold21143 |
38571 |
38594 |
+ |
(A)n |
Simple_repeat |
scaffold21143 |
39043 |
39223 |
+ |
RS14290 |
Unspecified |
scaffold21143 |
40945 |
41082 |
+ |
RS17486 |
Unspecified |
scaffold21143 |
41228 |
41264 |
+ |
(TTCAG)n |
Simple_repeat |
scaffold21143 |
41310 |
41449 |
+ |
RS10838 |
Unspecified |
scaffold21143 |
41549 |
41683 |
+ |
RS18346 |
Unspecified |
scaffold21143 |
41845 |
41985 |
+ |
RS507 |
Unspecified |
scaffold21143 |
41871 |
42017 |
- |
RS507 |
Unspecified |
scaffold21143 |
42010 |
42141 |
+ |
RS12745 |
Unspecified |
scaffold21143 |
42936 |
43029 |
+ |
RS4475 |
Unspecified |
scaffold21143 |
42959 |
43040 |
+ |
RS12885 |
Unspecified |
scaffold21143 |
43175 |
43314 |
+ |
RS10838 |
Unspecified |
scaffold21143 |
43407 |
43538 |
+ |
RS18346 |
Unspecified |
scaffold21143 |
43625 |
44204 |
- |
RS2033 |
Unspecified |
scaffold21143 |
44230 |
44278 |
+ |
(TTCTATT)n |
Simple_repeat |
scaffold21143 |
44820 |
45037 |
+ |
(A)n |
Simple_repeat |
scaffold21143 |
44820 |
44846 |
+ |
(A)n |
Simple_repeat |
scaffold21143 |
44842 |
45037 |
+ |
RS4635 |
Unspecified |
scaffold21143 |
45086 |
45132 |
- |
VIHAT2 |
DNA/hAT-Tag1 |
scaffold21143 |
45739 |
46115 |
+ |
RS637 |
Unspecified |
scaffold21143 |
46170 |
46265 |
- |
RS7996 |
Unspecified |
scaffold21143 |
46355 |
46387 |
+ |
A-rich |
Low_complexity |
scaffold21143 |
46594 |
46784 |
+ |
PL198 |
Unspecified |
scaffold21143 |
47740 |
47795 |
+ |
(T)n |
Simple_repeat |
scaffold21143 |
47968 |
48073 |
+ |
RS10433 |
Unspecified |
scaffold21143 |
48020 |
48120 |
+ |
RS10433 |
Unspecified |
scaffold21143 |
48215 |
48326 |
- |
RS16382 |
Unspecified |
scaffold21143 |
48304 |
48413 |
- |
RS6986 |
Unspecified |
scaffold21143 |
48723 |
48770 |
+ |
(TTATAA)n |
Simple_repeat |
scaffold21143 |
49579 |
49615 |
+ |
A-rich |
Low_complexity |
scaffold21143 |
49892 |
49937 |
+ |
(T)n |
Simple_repeat |
scaffold21143 |
50058 |
50106 |
+ |
(TTGTTAT)n |
Simple_repeat |
scaffold21143 |
50199 |
50448 |
- |
RS2350 |
Unspecified |
scaffold21143 |
50236 |
50473 |
- |
RS4529 |
Unspecified |
scaffold21143 |
50970 |
51038 |
+ |
(AAC)n |
Simple_repeat |
scaffold21143 |
52573 |
52664 |
- |
RS16382 |
Unspecified |
scaffold21143 |
53143 |
53202 |
- |
L1-4_CR |
LINE/L1? |
scaffold21143 |
53752 |
53800 |
+ |
(TATT)n |
Simple_repeat |
scaffold21143 |
54807 |
54931 |
- |
RS170 |
Unspecified |
scaffold21143 |
55154 |
55411 |
+ |
RS1 |
Unspecified |
scaffold21143 |
56499 |
56548 |
+ |
A-rich |
Low_complexity |
scaffold21143 |
56687 |
56764 |
+ |
(AATT)n |
Simple_repeat |
scaffold21143 |
56969 |
57003 |
+ |
(TCCTCG)n |
Simple_repeat |
scaffold21143 |
57472 |
57683 |
- |
Copia-3_PTri-I |
LTR/Copia |
scaffold21143 |
57868 |
57898 |
+ |
(AT)n |
Simple_repeat |
scaffold21143 |
58085 |
58215 |
- |
RS102 |
Unspecified |
scaffold21143 |
63498 |
63603 |
+ |
PL754 |
Unspecified |
scaffold21143 |
63510 |
63603 |
- |
RS4475 |
Unspecified |
scaffold21143 |
64090 |
64174 |
- |
Copia-3_PTri-I |
LTR/Copia |
scaffold21143 |
65321 |
65340 |
+ |
(A)n |
Simple_repeat |
scaffold21143 |
65960 |
65988 |
+ |
(A)n |
Simple_repeat |
scaffold21143 |
66054 |
66147 |
+ |
ATRAN |
DNA? |
scaffold21143 |
66379 |
66480 |
- |
RS594 |
Unspecified |
scaffold21143 |
66479 |
66721 |
- |
RS1095 |
Unspecified |
scaffold21143 |
66722 |
66852 |
- |
RS594 |
Unspecified |
scaffold21143 |
66801 |
66860 |
- |
RS1259 |
Unspecified |
scaffold21143 |
75329 |
75473 |
- |
Copia-3_PTri-I |
LTR/Copia |
scaffold21143 |
75474 |
75544 |
- |
Copia-3_PTri-I |
LTR/Copia |
scaffold21143 |
75943 |
76512 |
+ |
(TTTAT)n |
Simple_repeat |
scaffold21143 |
76441 |
76512 |
+ |
(TTTAT)n |
Simple_repeat |
scaffold21143 |
76786 |
76977 |
- |
PL622 |
Unspecified |
scaffold21143 |
77108 |
77469 |
+ |
RS614 |
Unspecified |
scaffold21143 |
79050 |
79085 |
+ |
(ATATAA)n |
Simple_repeat |
scaffold21143 |
79122 |
79252 |
+ |
RS915 |
Unspecified |
scaffold21143 |
79258 |
79334 |
- |
LTR-7_Mad-LTR |
LTR |
scaffold21143 |
79375 |
80257 |
- |
RS14391 |
Unspecified |
scaffold21143 |
80901 |
80947 |
+ |
A-rich |
Low_complexity |
scaffold21143 |
83368 |
83426 |
+ |
A-rich |
Low_complexity |
scaffold21143 |
84669 |
84723 |
+ |
(AATTTTT)n |
Simple_repeat |
scaffold21143 |
85055 |
85074 |
+ |
(A)n |
Simple_repeat |
scaffold21143 |
87175 |
87225 |
+ |
A-rich |
Low_complexity |
scaffold21143 |
87818 |
87878 |
+ |
(TATT)n |
Simple_repeat |
scaffold21143 |
88367 |
88413 |
+ |
(TATTA)n |
Simple_repeat |
scaffold21143 |
88412 |
88505 |
- |
RS4475 |
Unspecified |
scaffold21143 |
88744 |
89007 |
- |
RS356 |
Unspecified |
scaffold21143 |
90882 |
90921 |
+ |
(TTG)n |
Simple_repeat |
scaffold21143 |
91108 |
91144 |
+ |
(TTTG)n |
Simple_repeat |
scaffold21143 |
91253 |
91282 |
+ |
(T)n |
Simple_repeat |
scaffold21143 |
91442 |
91468 |
+ |
(T)n |
Simple_repeat |
scaffold21143 |
91755 |
91788 |
+ |
(CCTT)n |
Simple_repeat |
scaffold21143 |
92062 |
92116 |
+ |
(ATAAT)n |
Simple_repeat |
scaffold21143 |
92079 |
92132 |
+ |
A-rich |
Low_complexity |
scaffold21143 |
92723 |
92978 |
- |
RS1 |
Unspecified |
scaffold21143 |
93478 |
93527 |
+ |
(TTTTTG)n |
Simple_repeat |
scaffold21143 |
94185 |
94943 |
+ |
RS3447 |
Unspecified |
scaffold21143 |
94705 |
94991 |
+ |
RS5223 |
Unspecified |
scaffold21143 |
95051 |
95189 |
+ |
RS1730 |
Unspecified |
scaffold21143 |
98330 |
98388 |
+ |
RS1730 |
Unspecified |
scaffold21143 |
98586 |
99000 |
- |
RS3042 |
Unspecified |
scaffold21143 |
99044 |
99079 |
+ |
(TCATCC)n |
Simple_repeat |
scaffold21143 |
99620 |
99672 |
+ |
(TCTTGTT)n |
Simple_repeat |
scaffold21143 |
99966 |
101029 |
+ |
(T)n |
Simple_repeat |
scaffold21143 |
99966 |
99988 |
+ |
(T)n |
Simple_repeat |
scaffold21143 |
99980 |
101029 |
+ |
RS10962 |
Unspecified |
scaffold21143 |
101050 |
101093 |
+ |
(TTATCA)n |
Simple_repeat |
scaffold21143 |
101551 |
102348 |
+ |
Gypsy-120_GM-I |
LTR/Gypsy |
scaffold21143 |
101551 |
101601 |
+ |
Gypsy-120_GM-I |
LTR/Gypsy |
scaffold21143 |
101590 |
102348 |
+ |
RS3447 |
Unspecified |
scaffold21143 |
102110 |
102396 |
+ |
RS5223 |
Unspecified |
scaffold21143 |
102456 |
103577 |
+ |
RS1730 |
Unspecified |
scaffold21143 |
103731 |
103961 |
- |
RS11533 |
Unspecified |
scaffold21143 |
104024 |
104057 |
+ |
(A)n |
Simple_repeat |
scaffold21143 |
104055 |
104088 |
+ |
A-rich |
Low_complexity |
scaffold21143 |
104695 |
104745 |
+ |
(ATAGAT)n |
Simple_repeat |
scaffold21143 |
105045 |
105094 |
+ |
A-rich |
Low_complexity |
scaffold21143 |
105095 |
105116 |
+ |
(A)n |
Simple_repeat |
scaffold21143 |
105322 |
105343 |
+ |
(A)n |
Simple_repeat |
scaffold21143 |
105500 |
105555 |
+ |
(TTCTTT)n |
Simple_repeat |
scaffold21143 |
105662 |
105710 |
+ |
(GTT)n |
Simple_repeat |
scaffold21143 |
106100 |
106313 |
+ |
PL560 |
Unspecified |
scaffold21143 |
106342 |
106408 |
- |
RS15386 |
Unspecified |
scaffold21143 |
110331 |
110408 |
+ |
(A)n |
Simple_repeat |
scaffold21143 |
110551 |
110582 |
+ |
(TTCTC)n |
Simple_repeat |
scaffold21143 |
114068 |
114101 |
+ |
(TTCATT)n |
Simple_repeat |
scaffold21143 |
115394 |
115432 |
+ |
(TTATCA)n |
Simple_repeat |
scaffold21143 |
115886 |
115903 |
+ |
(T)n |
Simple_repeat |
scaffold21143 |
116098 |
116125 |
+ |
(T)n |
Simple_repeat |
scaffold21143 |
116250 |
116347 |
- |
RS38 |
Unspecified |
scaffold21143 |
116542 |
116571 |
+ |
(A)n |
Simple_repeat |
scaffold21143 |
117866 |
117932 |
+ |
(ATATTTA)n |
Simple_repeat |
scaffold21143 |
117947 |
118036 |
+ |
PL820 |
Unspecified |
scaffold21143 |
118067 |
118113 |
+ |
PL820 |
Unspecified |
scaffold21143 |
118110 |
118215 |
- |
RS8095 |
Unspecified |
scaffold21143 |
118228 |
118439 |
+ |
PL820 |
Unspecified |
scaffold21143 |
121735 |
121774 |
+ |
(ACGGAC)n |
Simple_repeat |
scaffold21143 |
122976 |
123042 |
+ |
PL40 |
Unspecified |
scaffold21143 |
124313 |
124355 |
+ |
A-rich |
Low_complexity |
scaffold21143 |
125603 |
125791 |
- |
RS509 |
Unspecified |
scaffold21143 |
127090 |
127130 |
- |
HADES_TA |
DNA/TcMar-Stowaway |
scaffold21143 |
128450 |
128490 |
+ |
(A)n |
Simple_repeat |
scaffold21143 |
128691 |
128718 |
+ |
A-rich |
Low_complexity |
scaffold21143 |
128853 |
128879 |
+ |
(T)n |
Simple_repeat |
scaffold21143 |
129491 |
129647 |
+ |
PL271 |
Unspecified |
scaffold21143 |
129831 |
129857 |
+ |
(T)n |
Simple_repeat |
scaffold21143 |
130791 |
130920 |
+ |
EnSpm-5_VV |
DNA/CMC-EnSpm |
scaffold21143 |
131229 |
131323 |
- |
ATRAN |
DNA? |
scaffold21143 |
131740 |
131759 |
+ |
(A)n |
Simple_repeat |
scaffold21143 |
132127 |
132223 |
+ |
LT1_EPa |
LTR? |
scaffold21143 |
133030 |
133110 |
+ |
(TTTATATA)n |
Simple_repeat |
scaffold21143 |
134101 |
134148 |
+ |
(T)n |
Simple_repeat |
scaffold21143 |
134461 |
134514 |
+ |
(AT)n |
Simple_repeat |
scaffold21143 |
134529 |
134620 |
+ |
RS4475 |
Unspecified |
scaffold21143 |
134694 |
134739 |
+ |
A-rich |
Low_complexity |
scaffold21143 |
134819 |
134837 |
+ |
(T)n |
Simple_repeat |
scaffold21143 |
135020 |
135276 |
- |
RS1 |
Unspecified |
scaffold21143 |
135401 |
135666 |
- |
RS356 |
Unspecified |
scaffold21143 |
136004 |
136020 |
+ |
(A)n |
Simple_repeat |
scaffold21143 |
137915 |
137976 |
+ |
(TACATA)n |
Simple_repeat |
scaffold21143 |
139021 |
139098 |
+ |
RS18358 |
Unspecified |
scaffold21143 |
140224 |
140297 |
+ |
RS79 |
Unspecified |
scaffold21143 |
140228 |
140324 |
+ |
RS15316 |
Unspecified |
scaffold21143 |
143296 |
143350 |
- |
RS727 |
Unspecified |
scaffold21143 |
143401 |
143484 |
+ |
Copia-3_PTri-I |
LTR/Copia |
scaffold21143 |
143699 |
143851 |
- |
Copia-3_PTri-I |
LTR/Copia |
scaffold21143 |
143699 |
143924 |
- |
Copia-3_PTri-I |
LTR/Copia |
scaffold21143 |
143815 |
143924 |
- |
RS18111 |
Unspecified |
scaffold21143 |
144425 |
144871 |
- |
PL270 |
Unspecified |
scaffold21143 |
144897 |
144937 |
+ |
(ATGAC)n |
Simple_repeat |
scaffold21143 |
144897 |
145058 |
+ |
(ATGAC)n |
Simple_repeat |
scaffold21143 |
144917 |
145058 |
+ |
RS13392 |
Unspecified |
scaffold21143 |
145096 |
145152 |
+ |
(TAATT)n |
Simple_repeat |
scaffold21143 |
145401 |
145641 |
+ |
PL688 |
Unspecified |
scaffold21143 |
145643 |
145683 |
+ |
A-rich |
Low_complexity |
scaffold21143 |
145727 |
145751 |
+ |
(AAAT)n |
Simple_repeat |
scaffold21143 |
145865 |
145933 |
+ |
(AATTAA)n |
Simple_repeat |
scaffold21143 |
146814 |
146903 |
+ |
(TTG)n |
Simple_repeat |
scaffold21143 |
147046 |
147101 |
- |
MuDR-11_GM |
DNA/MULE-MuDR |
scaffold21143 |
147054 |
147108 |
+ |
Ogre-PT3_I-int |
LTR/Gypsy |
scaffold21143 |
152289 |
152325 |
+ |
(A)n |
Simple_repeat |
scaffold21143 |
155046 |
155078 |
+ |
A-rich |
Low_complexity |
scaffold21143 |
155341 |
155484 |
+ |
(GCG)n |
Simple_repeat |
scaffold21143 |
155817 |
155853 |
+ |
(CGGCC)n |
Simple_repeat |
scaffold21143 |
155865 |
156081 |
+ |
(CAGCC)n |
Simple_repeat |
scaffold21143 |
156359 |
156467 |
+ |
hAT-3_GM |
DNA/hAT-Ac |
scaffold21143 |
156647 |
156665 |
+ |
(A)n |
Simple_repeat |
scaffold21143 |
157912 |
157953 |
+ |
(ATATCTT)n |
Simple_repeat |
scaffold21143 |
158966 |
159004 |
+ |
A-rich |
Low_complexity |
scaffold21143 |
159306 |
159326 |
+ |
(TTTG)n |
Simple_repeat |
scaffold21143 |
163810 |
163840 |
+ |
(TTCT)n |
Simple_repeat |
scaffold21143 |
164810 |
164828 |
+ |
(A)n |
Simple_repeat |
scaffold21143 |
167637 |
167661 |
+ |
(CTATGT)n |
Simple_repeat |
scaffold21143 |
172877 |
173008 |
- |
ATCopia34_LTR |
LTR/Copia |
scaffold21143 |
173145 |
173227 |
+ |
PL105 |
Unspecified |
scaffold21143 |
174077 |
174112 |
+ |
(ACTTTAA)n |
Simple_repeat |
scaffold21143 |
174981 |
175022 |
+ |
RS12833 |
Unspecified |
scaffold21143 |
175324 |
175470 |
+ |
(AGCTG)n |
Simple_repeat |
scaffold21143 |
175324 |
175569 |
+ |
(AGCTG)n |
Simple_repeat |
scaffold21143 |
175450 |
175646 |
+ |
(AAT)n |
Simple_repeat |
scaffold21143 |
175515 |
175646 |
+ |
(AAT)n |
Simple_repeat |
scaffold21143 |
175657 |
175765 |
+ |
(TAA)n |
Simple_repeat |
scaffold21143 |
175987 |
176089 |
+ |
A-rich |
Low_complexity |
scaffold21143 |
176100 |
176236 |
- |
RS4835 |
Unspecified |
scaffold21143 |
176238 |
176265 |
+ |
(TTA)n |
Simple_repeat |
scaffold21143 |
176273 |
176311 |
+ |
(TAATAG)n |
Simple_repeat |
scaffold21143 |
176318 |
176507 |
+ |
(AGCTG)n |
Simple_repeat |
scaffold21143 |
177337 |
177425 |
- |
Gypsy-33_Mad-I |
LTR/Gypsy |
scaffold21143 |
178115 |
178333 |
- |
RS11189 |
Unspecified |
scaffold21143 |
178596 |
178620 |
+ |
(T)n |
Simple_repeat |
scaffold21143 |
179068 |
179177 |
+ |
RS7307 |
Unspecified |
scaffold21143 |
179196 |
179466 |
- |
RS1 |
Unspecified |
scaffold21143 |
180095 |
180235 |
+ |
RS191 |
Unspecified |
scaffold21143 |
182380 |
182491 |
- |
PL803 |
Unspecified |
scaffold21143 |
182473 |
182574 |
- |
RS7795 |
Unspecified |
scaffold21143 |
182487 |
182574 |
- |
RS1722 |
Unspecified |
scaffold21143 |
182824 |
183063 |
- |
RS18 |
Unspecified |
scaffold21143 |
183267 |
183310 |
+ |
(T)n |
Simple_repeat |
scaffold21143 |
183445 |
183479 |
+ |
(TTCTTT)n |
Simple_repeat |
scaffold21143 |
183480 |
183542 |
+ |
(T)n |
Simple_repeat |
scaffold21143 |
183543 |
183552 |
+ |
(TTCTTT)n |
Simple_repeat |
scaffold21143 |
184130 |
184165 |
+ |
(TTATGCT)n |
Simple_repeat |
scaffold21143 |
184183 |
184226 |
+ |
RS16799 |
Unspecified |
scaffold21143 |
184190 |
184246 |
- |
RS429 |
Unspecified |
scaffold21143 |
185462 |
185489 |
+ |
(TAA)n |
Simple_repeat |
scaffold21143 |
187600 |
187634 |
+ |
(TCA)n |
Simple_repeat |
scaffold21143 |
190226 |
190308 |
- |
RS972 |
Unspecified |
scaffold21143 |
190651 |
190685 |
+ |
(CCGCCA)n |
Simple_repeat |
scaffold21143 |
190718 |
190777 |
+ |
(TGA)n |
Simple_repeat |
scaffold21143 |
192876 |
192916 |
+ |
Copia-3_PTri-I |
LTR/Copia |
scaffold21143 |
195881 |
195967 |
+ |
(TTCAAT)n |
Simple_repeat |
scaffold21143 |
196419 |
196450 |
+ |
(ATCCG)n |
Simple_repeat |
scaffold21143 |
196636 |
196661 |
+ |
(TTC)n |
Simple_repeat |
scaffold21143 |
197428 |
197457 |
+ |
(T)n |
Simple_repeat |
scaffold21143 |
200071 |
200112 |
+ |
(TTTTT)n |
Simple_repeat |
scaffold21143 |
200935 |
200976 |
+ |
(CTTTT)n |
Simple_repeat |
scaffold21143 |
202740 |
202846 |
+ |
(TTCAGCTCAG)n |
Simple_repeat |
scaffold21143 |
202865 |
202894 |
+ |
(ATT)n |
Simple_repeat |
scaffold21143 |
203268 |
203454 |
+ |
(TAA)n |
Simple_repeat |
scaffold21143 |
203461 |
203632 |
+ |
(AGTTC)n |
Simple_repeat |
scaffold21143 |
205802 |
205828 |
+ |
(A)n |
Simple_repeat |
scaffold21143 |
207245 |
207272 |
+ |
(A)n |
Simple_repeat |
scaffold21143 |
209015 |
209043 |
+ |
(A)n |
Simple_repeat |
scaffold21143 |
211688 |
211748 |
+ |
A-rich |
Low_complexity |
scaffold21143 |
211776 |
211834 |
+ |
(TTTAA)n |
Simple_repeat |
scaffold21143 |
211954 |
211973 |
+ |
(T)n |
Simple_repeat |
scaffold21143 |
212030 |
212291 |
- |
PL688 |
Unspecified |
scaffold21143 |
212991 |
213233 |
+ |
(TTCAG)n |
Simple_repeat |
scaffold21143 |
213264 |
213330 |
+ |
PL169 |
Unspecified |
scaffold21143 |
213507 |
213523 |
+ |
(A)n |
Simple_repeat |
scaffold21143 |
213637 |
213685 |
+ |
(A)n |
Simple_repeat |
scaffold21143 |
213800 |
214098 |
+ |
RS96 |
Unspecified |
scaffold21143 |
214036 |
214106 |
- |
RS11557 |
Unspecified |
scaffold21143 |
214368 |
214417 |
+ |
A-rich |
Low_complexity |
scaffold21143 |
215171 |
215263 |
+ |
RS594 |
Unspecified |
scaffold21143 |
217284 |
217559 |
+ |
RS1 |
Unspecified |
scaffold21143 |
217527 |
217576 |
+ |
RS17699 |
Unspecified |
scaffold21143 |
217560 |
217742 |
+ |
RS901 |
Unspecified |
scaffold21143 |
218255 |
218271 |
+ |
(A)n |
Simple_repeat |
scaffold21143 |
219221 |
219469 |
- |
RS193 |
Unspecified |
scaffold21143 |
219881 |
219939 |
+ |
A-rich |
Low_complexity |
scaffold21143 |
221161 |
221192 |
+ |
(TTATTT)n |
Simple_repeat |
scaffold21143 |
221332 |
221398 |
+ |
(TAT)n |
Simple_repeat |
scaffold21143 |
221755 |
221827 |
+ |
(TTTATTT)n |
Simple_repeat |
scaffold21143 |
226698 |
226878 |
+ |
RS79 |
Unspecified |
scaffold21143 |
227184 |
227202 |
+ |
(A)n |
Simple_repeat |
scaffold21143 |
227709 |
227748 |
+ |
(TAA)n |
Simple_repeat |
scaffold21143 |
231120 |
231156 |
+ |
(AT)n |
Simple_repeat |
scaffold21143 |
234581 |
234603 |
+ |
(A)n |
Simple_repeat |
scaffold21143 |
234946 |
234986 |
- |
COPI2_I-int |
LTR/Copia |
scaffold21143 |
235104 |
235130 |
+ |
(TTG)n |
Simple_repeat |
scaffold21143 |
235393 |
235608 |
+ |
RS9337 |
Unspecified |
scaffold21143 |
235688 |
235990 |
+ |
RS4452 |
Unspecified |
scaffold21143 |
236321 |
236690 |
+ |
RS5560 |
Unspecified |
scaffold21143 |
236507 |
237082 |
- |
RS2912 |
Unspecified |
scaffold21143 |
237044 |
237133 |
- |
RS3923 |
Unspecified |
scaffold21143 |
238738 |
238838 |
+ |
(TCTC)n |
Simple_repeat |
scaffold21143 |
241641 |
241668 |
+ |
(ACA)n |
Simple_repeat |
scaffold21143 |
241669 |
241686 |
+ |
A-rich |
Low_complexity |
scaffold21143 |
241858 |
241921 |
+ |
(ATGAA)n |
Simple_repeat |
scaffold21143 |
242173 |
242336 |
+ |
hAT-N16_ZM |
DNA/hAT-Ac |
scaffold21143 |
242351 |
242410 |
+ |
A-rich |
Low_complexity |
scaffold21143 |
242463 |
242529 |
+ |
(AGCTCG)n |
Simple_repeat |
scaffold21143 |
242548 |
242599 |
+ |
ZhATN1_ZM |
DNA/hAT-Ac |
scaffold21143 |
242600 |
242766 |
- |
DS-RICE3N |
DNA/hAT-Ac |
scaffold21143 |
242765 |
242827 |
+ |
RS163 |
Unspecified |
scaffold21143 |
243073 |
243119 |
+ |
(ATAATT)n |
Simple_repeat |
scaffold21143 |
243177 |
243453 |
+ |
RS586 |
Unspecified |
scaffold21143 |
244384 |
244411 |
+ |
(A)n |
Simple_repeat |
scaffold21143 |
248632 |
248674 |
+ |
A-rich |
Low_complexity |
scaffold21143 |
250004 |
250067 |
+ |
(TTTTAT)n |
Simple_repeat |
scaffold21143 |
250316 |
250335 |
+ |
(A)n |
Simple_repeat |
scaffold21143 |
252354 |
252388 |
+ |
(TATTTAA)n |
Simple_repeat |
scaffold21143 |
252801 |
252904 |
+ |
(A)n |
Simple_repeat |
scaffold21143 |
253885 |
256058 |
+ |
RS17302 |
Unspecified |
scaffold21143 |
256499 |
256517 |
+ |
(T)n |
Simple_repeat |
scaffold21143 |
260338 |
260359 |
+ |
(T)n |
Simple_repeat |
scaffold21143 |
262984 |
263014 |
+ |
(T)n |
Simple_repeat |
scaffold21143 |
263396 |
263456 |
+ |
(TT)n |
Simple_repeat |
scaffold21143 |
263565 |
264184 |
+ |
PL757 |
Unspecified |
scaffold21143 |
263904 |
264228 |
+ |
RS1716 |
Unspecified |
scaffold21143 |
264139 |
264239 |
- |
RS164 |
Unspecified |
scaffold21143 |
264228 |
264502 |
- |
RS311 |
Unspecified |
scaffold21143 |
267973 |
268002 |
+ |
(CAAT)n |
Simple_repeat |
scaffold21143 |
268253 |
268276 |
+ |
(TCA)n |
Simple_repeat |
scaffold21143 |
268403 |
268434 |
+ |
(GTGAAA)n |
Simple_repeat |
scaffold21143 |
268484 |
268525 |
+ |
(TAATTT)n |
Simple_repeat |
scaffold21143 |
268525 |
268556 |
+ |
(TGATGG)n |
Simple_repeat |
scaffold21143 |
268865 |
268931 |
+ |
(TT)n |
Simple_repeat |
scaffold21143 |
268976 |
269205 |
- |
PL301 |
Unspecified |
scaffold21143 |
269325 |
269441 |
- |
RS144 |
Unspecified |
scaffold21143 |
270195 |
270540 |
+ |
(TTCAG)n |
Simple_repeat |
scaffold21143 |
271614 |
271843 |
+ |
RS18 |
Unspecified |
scaffold21143 |
272840 |
272897 |
+ |
(TT)n |
Simple_repeat |
scaffold21143 |
273675 |
273702 |
+ |
(AACAA)n |
Simple_repeat |
scaffold21143 |
275661 |
275710 |
+ |
(TA)n |
Simple_repeat |
scaffold21143 |
276328 |
276454 |
+ |
PL169 |
Unspecified |
scaffold21143 |
276437 |
276529 |
- |
PL296 |
Unspecified |
scaffold21143 |
276791 |
276859 |
+ |
A-rich |
Low_complexity |
scaffold21143 |
277034 |
277152 |
- |
RS633 |
Unspecified |
scaffold21143 |
277234 |
277315 |
- |
PL296 |
Unspecified |
scaffold21143 |
277317 |
277555 |
- |
PL296 |
Unspecified |
scaffold21143 |
277555 |
277606 |
- |
PL296 |
Unspecified |
scaffold21143 |
277602 |
277636 |
- |
PL296 |
Unspecified |
scaffold21143 |
278467 |
278582 |
- |
RS285 |
Unspecified |
scaffold21143 |
280224 |
280268 |
+ |
RS170 |
Unspecified |
scaffold21143 |
280290 |
280411 |
+ |
RS170 |
Unspecified |
scaffold21143 |
281875 |
282160 |
- |
RS17600 |
Unspecified |
scaffold21143 |
282413 |
282439 |
+ |
(TCAAT)n |
Simple_repeat |
scaffold21143 |
282467 |
282498 |
+ |
(ATC)n |
Simple_repeat |
scaffold21143 |
282733 |
282774 |
+ |
(TTTTTAC)n |
Simple_repeat |
scaffold21143 |
282944 |
282979 |
+ |
(AATT)n |
Simple_repeat |
scaffold21143 |
288121 |
288213 |
- |
L1-2_STu |
LINE/L1 |
scaffold21143 |
288214 |
288364 |
- |
Copia-2_SL-LTR |
LTR/Copia |
scaffold21143 |
288369 |
288438 |
- |
PL701 |
Unspecified |
scaffold21143 |
289322 |
289350 |
+ |
(T)n |
Simple_repeat |
scaffold21143 |
289903 |
289965 |
+ |
(TTATGAT)n |
Simple_repeat |
scaffold21143 |
292954 |
293001 |
+ |
(ATTACAT)n |
Simple_repeat |
scaffold21143 |
294074 |
294111 |
+ |
(AACAAA)n |
Simple_repeat |
scaffold21143 |
298930 |
298953 |
+ |
(A)n |
Simple_repeat |
scaffold21143 |
299292 |
299309 |
+ |
(T)n |
Simple_repeat |
scaffold21143 |
299419 |
299486 |
+ |
A-rich |
Low_complexity |
scaffold21143 |
299665 |
299864 |
+ |
(CCCGA)n |
Simple_repeat |
scaffold21143 |
300042 |
300262 |
+ |
(CCCGA)n |
Simple_repeat |
scaffold21143 |
301081 |
301119 |
+ |
A-rich |
Low_complexity |
scaffold21143 |
302364 |
302458 |
+ |
RS16382 |
Unspecified |
scaffold21143 |
302629 |
302668 |
+ |
(ATTA)n |
Simple_repeat |
scaffold21143 |
302836 |
302882 |
+ |
(ATT)n |
Simple_repeat |
scaffold21143 |
302891 |
302925 |
+ |
(TAC)n |
Simple_repeat |
scaffold21143 |
302984 |
303102 |
+ |
(TAAT)n |
Simple_repeat |
scaffold21143 |
304472 |
304504 |
+ |
(A)n |
Simple_repeat |
scaffold21143 |
304845 |
304874 |
+ |
(AAAT)n |
Simple_repeat |
scaffold21143 |
309102 |
309180 |
+ |
GA-rich |
Low_complexity |
scaffold21143 |
309465 |
309514 |
+ |
G-rich |
Low_complexity |
scaffold21143 |
309545 |
309647 |
+ |
(TGG)n |
Simple_repeat |
scaffold21143 |
309793 |
309816 |
+ |
(AGGG)n |
Simple_repeat |
scaffold21143 |
309964 |
309994 |
+ |
(GGGA)n |
Simple_repeat |
scaffold21143 |
311051 |
311058 |
+ |
(TAATTATT)n |
Simple_repeat |
scaffold21143 |
311059 |
311094 |
+ |
(TTTTA)n |
Simple_repeat |
scaffold21143 |
311095 |
311102 |
+ |
(TAATTATT)n |
Simple_repeat |
scaffold21143 |
311984 |
312184 |
+ |
(A)n |
Simple_repeat |
scaffold21143 |
311984 |
312009 |
+ |
(A)n |
Simple_repeat |
scaffold21143 |
311998 |
312184 |
- |
PL466 |
Unspecified |
scaffold21143 |
312319 |
312362 |
+ |
(ATTT)n |
Simple_repeat |
scaffold21143 |
312775 |
312837 |
+ |
A-rich |
Low_complexity |
scaffold21143 |
313018 |
313080 |
+ |
(TT)n |
Simple_repeat |
scaffold21143 |
318862 |
318882 |
+ |
(A)n |
Simple_repeat |
scaffold21143 |
319230 |
319322 |
+ |
(CTT)n |
Simple_repeat |
scaffold21143 |
319342 |
319394 |
+ |
(CTTTTT)n |
Simple_repeat |
scaffold21143 |
319414 |
319493 |
- |
Copia-3_PTri-I |
LTR/Copia |
scaffold21143 |
319561 |
319644 |
- |
Copia-3_PTri-I |
LTR/Copia |
scaffold21143 |
321816 |
321842 |
+ |
(T)n |
Simple_repeat |
scaffold21143 |
321982 |
322017 |
+ |
(ATT)n |
Simple_repeat |
scaffold21143 |
322116 |
322135 |
+ |
(TA)n |
Simple_repeat |
scaffold21143 |
323753 |
323776 |
+ |
(TGT)n |
Simple_repeat |
scaffold21143 |
324920 |
324941 |
+ |
(T)n |
Simple_repeat |
scaffold21143 |
325313 |
325431 |
- |
RS3564 |
Unspecified |
scaffold21143 |
325511 |
325551 |
+ |
(TTATTAA)n |
Simple_repeat |
scaffold21143 |
326176 |
326448 |
+ |
RS586 |
Unspecified |
scaffold21143 |
326993 |
327049 |
+ |
(ATTTT)n |
Simple_repeat |
scaffold21143 |
327110 |
327359 |
+ |
RS4 |
Unspecified |
scaffold21143 |
327306 |
327395 |
- |
RS987 |
Unspecified |
scaffold21143 |
327404 |
327478 |
- |
Copia29-VV_I-int |
LTR/Copia |
scaffold21143 |
327833 |
327886 |
+ |
(ATT)n |
Simple_repeat |
scaffold21143 |
328218 |
328277 |
+ |
(GAACT)n |
Simple_repeat |
scaffold21143 |
328960 |
328999 |
+ |
(TAATATG)n |
Simple_repeat |
scaffold21143 |
329213 |
329858 |
- |
RS3569 |
Unspecified |
scaffold21143 |
329702 |
330017 |
- |
RS520 |
Unspecified |
scaffold21143 |
329947 |
330230 |
+ |
RS13405 |
Unspecified |
scaffold21143 |
330301 |
330474 |
+ |
RS2403 |
Unspecified |
scaffold21143 |
331517 |
331671 |
+ |
Copia-2_SL-LTR |
LTR/Copia |
scaffold21143 |
332262 |
332338 |
- |
LTR-7_Mad-LTR |
LTR |
scaffold21143 |
332977 |
333092 |
- |
PL754 |
Unspecified |
scaffold21143 |
333487 |
333524 |
+ |
(AAT)n |
Simple_repeat |
scaffold21143 |
333564 |
333631 |
+ |
A-rich |
Low_complexity |
scaffold21143 |
333730 |
333825 |
+ |
A-rich |
Low_complexity |
scaffold21143 |
334427 |
334458 |
+ |
(T)n |
Simple_repeat |
scaffold21143 |
334824 |
334857 |
+ |
(A)n |
Simple_repeat |
scaffold21143 |
336755 |
336803 |
+ |
(TTACCA)n |
Simple_repeat |
scaffold21143 |
337371 |
337413 |
+ |
(T)n |
Simple_repeat |
scaffold21143 |
337515 |
337566 |
+ |
GA-rich |
Low_complexity |
scaffold21143 |
337762 |
337803 |
+ |
(TCAAT)n |
Simple_repeat |
scaffold21143 |
337787 |
337842 |
+ |
(TTATTTA)n |
Simple_repeat |
scaffold21143 |
338164 |
338255 |
+ |
RS997 |
Unspecified |
scaffold21143 |
338248 |
338512 |
- |
RS1043 |
Unspecified |
scaffold21143 |
338511 |
338592 |
+ |
RS415 |
Unspecified |
scaffold21143 |
338818 |
338885 |
+ |
(AATATT)n |
Simple_repeat |
scaffold21143 |
339275 |
339381 |
+ |
RS525 |
Unspecified |
scaffold21143 |
339287 |
339407 |
- |
RS250 |
Unspecified |
scaffold21143 |
339825 |
339861 |
+ |
(TTTTAT)n |
Simple_repeat |
scaffold21143 |
340347 |
340440 |
- |
RS8095 |
Unspecified |
scaffold21143 |
340608 |
340654 |
+ |
A-rich |
Low_complexity |
scaffold21143 |
341530 |
341590 |
+ |
(TCCCT)n |
Simple_repeat |
scaffold21143 |
341972 |
342038 |
+ |
(TTAAT)n |
Simple_repeat |
scaffold21143 |
342024 |
342046 |
+ |
(T)n |
Simple_repeat |
scaffold21143 |
342246 |
342314 |
+ |
(TAATT)n |
Simple_repeat |
scaffold21143 |
342404 |
342559 |
+ |
hAT-N16_ZM |
DNA/hAT-Ac |
scaffold21143 |
342579 |
342641 |
+ |
A-rich |
Low_complexity |
scaffold21143 |
342691 |
342712 |
+ |
ZhATN1_ZM |
DNA/hAT-Ac |
scaffold21143 |
342713 |
342879 |
- |
DS-RICE3N |
DNA/hAT-Ac |
scaffold21143 |
346584 |
346607 |
+ |
(T)n |
Simple_repeat |
scaffold21143 |
347603 |
347650 |
- |
MuDR-8_VV |
DNA/MULE-MuDR |
scaffold21143 |
348166 |
348205 |
+ |
(AT)n |
Simple_repeat |
scaffold21143 |
348492 |
348529 |
+ |
A-rich |
Low_complexity |
scaffold21143 |
348683 |
348750 |
+ |
(TCCCC)n |
Simple_repeat |
scaffold21143 |
349248 |
349266 |
+ |
(T)n |
Simple_repeat |
scaffold21143 |
351295 |
351325 |
+ |
A-rich |
Low_complexity |
scaffold21143 |
351436 |
351542 |
+ |
RS285 |
Unspecified |
scaffold21143 |
351471 |
351551 |
- |
RS14977 |
Unspecified |
scaffold21143 |
352271 |
352331 |
+ |
GA-rich |
Low_complexity |
scaffold21143 |
352482 |
352729 |
- |
Copia-85_ST-I |
LTR/Copia |
scaffold21143 |
353495 |
353541 |
+ |
A-rich |
Low_complexity |
scaffold21143 |
354127 |
355070 |
- |
RS2175 |
Unspecified |
scaffold21143 |
354845 |
355250 |
- |
RS716 |
Unspecified |
scaffold21143 |
355606 |
355678 |
+ |
(AATT)n |
Simple_repeat |
scaffold21143 |
355673 |
355760 |
+ |
RS6521 |
Unspecified |
scaffold21143 |
356537 |
357059 |
+ |
RS3214 |
Unspecified |
scaffold21143 |
356595 |
358825 |
- |
RS299 |
Unspecified |
scaffold21143 |
358987 |
359193 |
+ |
RS4066 |
Unspecified |
scaffold21143 |
359272 |
359413 |
+ |
RS4775 |
Unspecified |
scaffold21143 |
359421 |
359563 |
+ |
RS4775 |
Unspecified |
scaffold21143 |
359571 |
359713 |
+ |
RS4775 |
Unspecified |
scaffold21143 |
359721 |
359862 |
+ |
RS4775 |
Unspecified |
scaffold21143 |
359870 |
360012 |
+ |
RS4775 |
Unspecified |
scaffold21143 |
361652 |
361677 |
+ |
(CT)n |
Simple_repeat |
scaffold21143 |
361869 |
362152 |
- |
RS637 |
Unspecified |