scaffold21378 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold21378 |
475 |
515 |
+ |
(ATTATAA)n |
Simple_repeat |
| scaffold21378 |
750 |
807 |
+ |
A-rich |
Low_complexity |
| scaffold21378 |
1289 |
1327 |
+ |
(AACATT)n |
Simple_repeat |
| scaffold21378 |
1929 |
2020 |
+ |
RS16025 |
Unspecified |
| scaffold21378 |
2188 |
2225 |
+ |
(TA)n |
Simple_repeat |
| scaffold21378 |
2622 |
2682 |
+ |
A-rich |
Low_complexity |
| scaffold21378 |
2927 |
2959 |
+ |
(TCC)n |
Simple_repeat |
| scaffold21378 |
3704 |
3828 |
+ |
RS2082 |
Unspecified |
| scaffold21378 |
4285 |
4317 |
+ |
(TCTTCA)n |
Simple_repeat |
| scaffold21378 |
5576 |
5607 |
+ |
(A)n |
Simple_repeat |
| scaffold21378 |
5637 |
6770 |
+ |
RS497 |
Unspecified |
| scaffold21378 |
6351 |
6384 |
+ |
(T)n |
Simple_repeat |
| scaffold21378 |
7390 |
8347 |
+ |
RS218 |
Unspecified |
| scaffold21378 |
7548 |
8359 |
+ |
PL761 |
Unspecified |
| scaffold21378 |
8891 |
8925 |
+ |
(A)n |
Simple_repeat |
| scaffold21378 |
9460 |
9611 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold21378 |
10143 |
10203 |
- |
PIGY-I_PS |
LTR/Gypsy |
| scaffold21378 |
10226 |
10260 |
+ |
(TAA)n |
Simple_repeat |
| scaffold21378 |
10616 |
10652 |
+ |
A-rich |
Low_complexity |
| scaffold21378 |
12009 |
12240 |
+ |
(TCCGG)n |
Simple_repeat |
| scaffold21378 |
14856 |
14892 |
+ |
(TTAGGGTTT)n |
Simple_repeat |
| scaffold21378 |
14899 |
14963 |
+ |
(TGG)n |
Simple_repeat |
| scaffold21378 |
14964 |
14981 |
+ |
(TGGAGG)n |
Simple_repeat |
| scaffold21378 |
15264 |
15423 |
- |
RS2331 |
Unspecified |
| scaffold21378 |
15743 |
15771 |
+ |
A-rich |
Low_complexity |
| scaffold21378 |
18265 |
18315 |
+ |
A-rich |
Low_complexity |
| scaffold21378 |
19720 |
19750 |
+ |
A-rich |
Low_complexity |
| scaffold21378 |
19869 |
19947 |
- |
Copia-106_Mad-I |
LTR/Copia |
| scaffold21378 |
21129 |
21235 |
+ |
A-rich |
Low_complexity |
| scaffold21378 |
21849 |
21899 |
+ |
(TA)n |
Simple_repeat |
| scaffold21378 |
22044 |
22065 |
+ |
(A)n |
Simple_repeat |
| scaffold21378 |
22408 |
22435 |
+ |
(T)n |
Simple_repeat |
| scaffold21378 |
22454 |
22492 |
+ |
(T)n |
Simple_repeat |
| scaffold21378 |
22504 |
22542 |
+ |
(A)n |
Simple_repeat |
| scaffold21378 |
22504 |
22603 |
+ |
(A)n |
Simple_repeat |
| scaffold21378 |
22526 |
22603 |
- |
RS504 |
Unspecified |
| scaffold21378 |
22587 |
22657 |
- |
RS542 |
Unspecified |
| scaffold21378 |
22656 |
22754 |
+ |
RS16382 |
Unspecified |
| scaffold21378 |
22836 |
23111 |
- |
RS504 |
Unspecified |
| scaffold21378 |
23741 |
23987 |
+ |
RS782 |
Unspecified |
| scaffold21378 |
24080 |
24176 |
+ |
RS4475 |
Unspecified |
| scaffold21378 |
25211 |
25290 |
+ |
RS17 |
Unspecified |
| scaffold21378 |
25426 |
25442 |
+ |
(T)n |
Simple_repeat |
| scaffold21378 |
25664 |
25906 |
- |
RS4 |
Unspecified |
| scaffold21378 |
26033 |
26117 |
- |
HADES_TA |
DNA/TcMar-Stowaway |
| scaffold21378 |
26122 |
26146 |
+ |
(A)n |
Simple_repeat |
| scaffold21378 |
26220 |
26294 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold21378 |
27798 |
27828 |
+ |
G-rich |
Low_complexity |
| scaffold21378 |
27978 |
28011 |
+ |
(CTCCC)n |
Simple_repeat |
| scaffold21378 |
28206 |
28431 |
- |
PL9 |
Unspecified |
| scaffold21378 |
29396 |
29447 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold21378 |
29631 |
29778 |
+ |
(TTTACA)n |
Simple_repeat |
| scaffold21378 |
29729 |
29778 |
+ |
(TTTACA)n |
Simple_repeat |
| scaffold21378 |
29782 |
29836 |
+ |
A-rich |
Low_complexity |
| scaffold21378 |
30255 |
30292 |
+ |
(TTTCTTT)n |
Simple_repeat |
| scaffold21378 |
30416 |
30453 |
- |
RS1 |
Unspecified |
| scaffold21378 |
30423 |
30678 |
+ |
RS1 |
Unspecified |
| scaffold21378 |
31129 |
31376 |
- |
RS8550 |
Unspecified |
| scaffold21378 |
31458 |
31556 |
- |
RS7349 |
Unspecified |
| scaffold21378 |
31483 |
31689 |
- |
RS12063 |
Unspecified |
| scaffold21378 |
31847 |
31902 |
+ |
(AATCT)n |
Simple_repeat |
| scaffold21378 |
32167 |
32200 |
+ |
A-rich |
Low_complexity |
| scaffold21378 |
32610 |
32855 |
- |
RS595 |
Unspecified |
| scaffold21378 |
33381 |
33503 |
+ |
RS4164 |
Unspecified |
| scaffold21378 |
35504 |
35543 |
+ |
(AAC)n |
Simple_repeat |
| scaffold21378 |
35764 |
35799 |
+ |
(AATT)n |
Simple_repeat |
| scaffold21378 |
36211 |
36391 |
+ |
RS586 |
Unspecified |
| scaffold21378 |
36555 |
36612 |
- |
SINE2-1_STu |
SINE/tRNA |
| scaffold21378 |
37250 |
37355 |
+ |
RS586 |
Unspecified |
| scaffold21378 |
37250 |
37369 |
- |
RS18072 |
Unspecified |
| scaffold21378 |
38198 |
38242 |
+ |
(ATTTTT)n |
Simple_repeat |
| scaffold21378 |
38452 |
38720 |
+ |
RS2914 |
Unspecified |
| scaffold21378 |
38670 |
38781 |
+ |
RS13963 |
Unspecified |
| scaffold21378 |
39549 |
39572 |
+ |
(T)n |
Simple_repeat |
| scaffold21378 |
40276 |
40329 |
+ |
(A)n |
Simple_repeat |
| scaffold21378 |
40436 |
40473 |
+ |
A-rich |
Low_complexity |
| scaffold21378 |
40683 |
40755 |
+ |
A-rich |
Low_complexity |
| scaffold21378 |
41322 |
41366 |
+ |
GA-rich |
Low_complexity |
| scaffold21378 |
41767 |
41796 |
+ |
(TTCCC)n |
Simple_repeat |
| scaffold21378 |
42032 |
42301 |
- |
RS736 |
Unspecified |
| scaffold21378 |
43027 |
43126 |
- |
RS16382 |
Unspecified |
| scaffold21378 |
43288 |
43327 |
+ |
(TAT)n |
Simple_repeat |
| scaffold21378 |
43361 |
43386 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold21378 |
44217 |
44280 |
+ |
A-rich |
Low_complexity |
| scaffold21378 |
44285 |
44534 |
+ |
RS18125 |
Unspecified |
| scaffold21378 |
44875 |
44987 |
+ |
RS736 |
Unspecified |
| scaffold21378 |
45611 |
45790 |
- |
RS908 |
Unspecified |
| scaffold21378 |
46375 |
46422 |
+ |
A-rich |
Low_complexity |
| scaffold21378 |
46547 |
46790 |
- |
PL798 |
Unspecified |
| scaffold21378 |
46954 |
47000 |
- |
CAULIV-1B_SBi |
LTR/Caulimovirus |
| scaffold21378 |
47049 |
47180 |
- |
hAT-N16_ZM |
DNA/hAT-Ac |
| scaffold21378 |
47910 |
47944 |
+ |
(TAA)n |
Simple_repeat |
| scaffold21378 |
48852 |
48880 |
+ |
A-rich |
Low_complexity |
| scaffold21378 |
49174 |
49458 |
+ |
RS1095 |
Unspecified |
| scaffold21378 |
53718 |
54182 |
- |
RS7345 |
Unspecified |
| scaffold21378 |
53845 |
54293 |
+ |
RS15023 |
Unspecified |
| scaffold21378 |
55586 |
55807 |
+ |
RS17401 |
Unspecified |
| scaffold21378 |
55992 |
56142 |
+ |
RS12595 |
Unspecified |
| scaffold21378 |
56688 |
56884 |
+ |
RS17401 |
Unspecified |
| scaffold21378 |
57199 |
57351 |
+ |
RS12595 |
Unspecified |
| scaffold21378 |
57442 |
57565 |
+ |
RS12378 |
Unspecified |
| scaffold21378 |
57712 |
57928 |
+ |
RS16146 |
Unspecified |
| scaffold21378 |
58130 |
58356 |
+ |
RS16006 |
Unspecified |
| scaffold21378 |
58536 |
58562 |
+ |
(TCT)n |
Simple_repeat |
| scaffold21378 |
62221 |
62257 |
+ |
(TA)n |
Simple_repeat |
| scaffold21378 |
63330 |
63503 |
- |
ATENSPM1A |
DNA/CMC-EnSpm |
| scaffold21378 |
64205 |
64278 |
+ |
(TAA)n |
Simple_repeat |
| scaffold21378 |
64538 |
64597 |
+ |
(TATTTTA)n |
Simple_repeat |
| scaffold21378 |
64710 |
65006 |
- |
RS1919 |
Unspecified |
| scaffold21378 |
66088 |
66149 |
+ |
(TTCCTC)n |
Simple_repeat |
| scaffold21378 |
66922 |
67149 |
+ |
RS17401 |
Unspecified |
| scaffold21378 |
67197 |
67364 |
- |
RS668 |
Unspecified |
| scaffold21378 |
67425 |
67490 |
+ |
(ATTAA)n |
Simple_repeat |
| scaffold21378 |
68313 |
68426 |
- |
RS668 |
Unspecified |
| scaffold21378 |
68680 |
68711 |
+ |
(TG)n |
Simple_repeat |
| scaffold21378 |
73942 |
73989 |
+ |
(CTTTTGT)n |
Simple_repeat |
| scaffold21378 |
74179 |
74437 |
+ |
RS7064 |
Unspecified |
| scaffold21378 |
74214 |
74566 |
- |
RS1094 |
Unspecified |
| scaffold21378 |
74441 |
74600 |
- |
RS1094 |
Unspecified |
| scaffold21378 |
74487 |
74617 |
- |
RS314 |
Unspecified |
| scaffold21378 |
74895 |
74920 |
- |
Copia-90_Mad-I |
LTR/Copia |
| scaffold21378 |
74921 |
74998 |
- |
ATGP5A_I-int |
LTR/Gypsy |
| scaffold21378 |
74999 |
75015 |
- |
Copia-90_Mad-I |
LTR/Copia |
| scaffold21378 |
75086 |
75199 |
- |
Gypsy27-ZM_I-int |
LTR/Gypsy |
| scaffold21378 |
75372 |
76059 |
- |
Gypsy3-VV_I-int |
LTR/Gypsy |
| scaffold21378 |
76519 |
77534 |
- |
Gypsy-29_Mad-I |
LTR/Gypsy |
| scaffold21378 |
80772 |
80855 |
+ |
(TATG)n |
Simple_repeat |
| scaffold21378 |
81987 |
82038 |
+ |
(TTGTTT)n |
Simple_repeat |
| scaffold21378 |
83796 |
83843 |
+ |
(TGTAGCT)n |
Simple_repeat |