scaffold21627 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold21627 |
1 |
823 |
- |
RS2700 |
Unspecified |
| scaffold21627 |
624 |
1027 |
+ |
RS105 |
Unspecified |
| scaffold21627 |
2000 |
2027 |
- |
Gypsy-46_STu-I |
LTR/Gypsy |
| scaffold21627 |
2888 |
3094 |
+ |
RS21 |
Unspecified |
| scaffold21627 |
3041 |
4193 |
+ |
RS21 |
Unspecified |
| scaffold21627 |
8345 |
8743 |
- |
PL538 |
Unspecified |
| scaffold21627 |
8739 |
8985 |
- |
Gypsy9-PTR_I-int |
LTR/Gypsy |
| scaffold21627 |
9239 |
9477 |
- |
Gypsy9-PTR_I-int |
LTR/Gypsy |
| scaffold21627 |
9704 |
9765 |
- |
Gypsy9-PTR_I-int |
LTR/Gypsy |
| scaffold21627 |
11240 |
11312 |
- |
RS257 |
Unspecified |
| scaffold21627 |
11626 |
11704 |
+ |
(A)n |
Simple_repeat |
| scaffold21627 |
14808 |
14870 |
+ |
(GGT)n |
Simple_repeat |
| scaffold21627 |
15129 |
15171 |
+ |
(TGATT)n |
Simple_repeat |
| scaffold21627 |
15227 |
15257 |
+ |
(TTAATA)n |
Simple_repeat |
| scaffold21627 |
15281 |
15556 |
+ |
RS1155 |
Unspecified |
| scaffold21627 |
15565 |
15642 |
+ |
RS9061 |
Unspecified |
| scaffold21627 |
15575 |
15734 |
+ |
RS9061 |
Unspecified |
| scaffold21627 |
15646 |
15738 |
- |
RS8136 |
Unspecified |
| scaffold21627 |
16071 |
16113 |
+ |
(TGATT)n |
Simple_repeat |
| scaffold21627 |
16169 |
16199 |
+ |
(TTAATA)n |
Simple_repeat |
| scaffold21627 |
16699 |
16725 |
+ |
(ATC)n |
Simple_repeat |
| scaffold21627 |
16940 |
16958 |
+ |
(AAC)n |
Simple_repeat |
| scaffold21627 |
17115 |
17155 |
+ |
(GGT)n |
Simple_repeat |
| scaffold21627 |
17241 |
17268 |
+ |
(T)n |
Simple_repeat |
| scaffold21627 |
17804 |
17962 |
- |
RS17377 |
Unspecified |
| scaffold21627 |
18348 |
18462 |
- |
RS13181 |
Unspecified |
| scaffold21627 |
21066 |
21224 |
+ |
RS421 |
Unspecified |
| scaffold21627 |
24205 |
25035 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold21627 |
24218 |
24517 |
+ |
CASTOR_I-int |
LTR/Copia |
| scaffold21627 |
24616 |
24787 |
+ |
CASTOR_I-int |
LTR/Copia |
| scaffold21627 |
24850 |
25356 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold21627 |
25124 |
25326 |
+ |
CASTOR_I-int |
LTR/Copia |
| scaffold21627 |
25357 |
26593 |
+ |
CASTOR_I-int |
LTR/Copia |
| scaffold21627 |
27510 |
28975 |
+ |
CASTOR_I-int |
LTR/Copia |
| scaffold21627 |
29125 |
29715 |
+ |
Copia-71_VV-I |
LTR/Copia |
| scaffold21627 |
32747 |
32778 |
+ |
GA-rich |
Low_complexity |
| scaffold21627 |
37264 |
37320 |
+ |
A-rich |
Low_complexity |
| scaffold21627 |
37981 |
38233 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold21627 |
41035 |
41223 |
+ |
RS1797 |
Unspecified |
| scaffold21627 |
41221 |
41460 |
- |
Copia-33_BRa-I |
LTR/Copia |
| scaffold21627 |
41460 |
42894 |
- |
ATCopia92_I-int |
LTR/Copia |
| scaffold21627 |
42458 |
43012 |
- |
Copia-17_EPa-I |
LTR |
| scaffold21627 |
43283 |
43603 |
+ |
Copia-77_SB-I |
LTR/Copia |
| scaffold21627 |
43321 |
44108 |
- |
ATCopia92_I-int |
LTR/Copia |
| scaffold21627 |
44225 |
44618 |
- |
ATCopia92_I-int |
LTR/Copia |
| scaffold21627 |
44741 |
44778 |
+ |
(GGTTGG)n |
Simple_repeat |
| scaffold21627 |
44871 |
45452 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold21627 |
44902 |
45093 |
- |
ATCopia92_I-int |
LTR/Copia |
| scaffold21627 |
45661 |
45849 |
+ |
RS1797 |
Unspecified |
| scaffold21627 |
45979 |
46353 |
+ |
RS395 |
Unspecified |
| scaffold21627 |
46884 |
46928 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold21627 |
46930 |
47156 |
+ |
RS12145 |
Unspecified |
| scaffold21627 |
47157 |
47231 |
- |
RS8491 |
Unspecified |
| scaffold21627 |
48244 |
48479 |
+ |
Copia-33_BRa-I |
LTR/Copia |