scaffold218 Repeat List
genome |
start |
end |
strand |
repeat-name |
repeat-class |
scaffold218 |
1 |
25 |
+ |
(ATA)n |
Simple_repeat |
scaffold218 |
250 |
280 |
+ |
(TTTTTG)n |
Simple_repeat |
scaffold218 |
608 |
904 |
- |
RS574 |
Unspecified |
scaffold218 |
1252 |
1350 |
+ |
(TCGGG)n |
Simple_repeat |
scaffold218 |
1669 |
1751 |
+ |
HAT-10_Mad |
DNA/hAT-Ac |
scaffold218 |
1967 |
2321 |
- |
RS1129 |
Unspecified |
scaffold218 |
2276 |
2327 |
- |
RS1129 |
Unspecified |
scaffold218 |
2518 |
2731 |
+ |
RS1129 |
Unspecified |
scaffold218 |
2879 |
2913 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
4328 |
4347 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
5036 |
5074 |
+ |
(TTGTTCT)n |
Simple_repeat |
scaffold218 |
7463 |
7505 |
+ |
(AGTTC)n |
Simple_repeat |
scaffold218 |
7815 |
7833 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
7957 |
7992 |
+ |
(TAAAT)n |
Simple_repeat |
scaffold218 |
8054 |
8071 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
12152 |
12234 |
+ |
(CAGTT)n |
Simple_repeat |
scaffold218 |
16799 |
16918 |
+ |
(CAGTT)n |
Simple_repeat |
scaffold218 |
17442 |
17522 |
- |
PL490 |
Unspecified |
scaffold218 |
17648 |
17677 |
+ |
(TAAT)n |
Simple_repeat |
scaffold218 |
17987 |
18046 |
+ |
RS5812 |
Unspecified |
scaffold218 |
18779 |
19095 |
+ |
MuDR-2_Mad |
DNA/MULE-MuDR |
scaffold218 |
20691 |
20710 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
21258 |
21325 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
22452 |
22912 |
- |
PL463 |
Unspecified |
scaffold218 |
23148 |
23208 |
- |
PL102 |
Unspecified |
scaffold218 |
23932 |
24046 |
- |
RS114 |
Unspecified |
scaffold218 |
26977 |
27106 |
+ |
RS4 |
Unspecified |
scaffold218 |
26981 |
27122 |
+ |
RS18405 |
Unspecified |
scaffold218 |
27152 |
27412 |
- |
RS26 |
Unspecified |
scaffold218 |
27652 |
27678 |
+ |
(TAAC)n |
Simple_repeat |
scaffold218 |
27924 |
27961 |
+ |
(TAATC)n |
Simple_repeat |
scaffold218 |
30240 |
30385 |
+ |
(AACTG)n |
Simple_repeat |
scaffold218 |
30462 |
30617 |
+ |
(CCCGA)n |
Simple_repeat |
scaffold218 |
31191 |
31224 |
+ |
(TTTC)n |
Simple_repeat |
scaffold218 |
33245 |
33290 |
+ |
RS1746 |
Unspecified |
scaffold218 |
33850 |
33895 |
+ |
(TA)n |
Simple_repeat |
scaffold218 |
33974 |
34039 |
- |
RS686 |
Unspecified |
scaffold218 |
34037 |
34145 |
- |
RS1 |
Unspecified |
scaffold218 |
34056 |
34167 |
+ |
RS17699 |
Unspecified |
scaffold218 |
34250 |
34319 |
- |
RS686 |
Unspecified |
scaffold218 |
34679 |
34930 |
+ |
(CAGTT)n |
Simple_repeat |
scaffold218 |
34679 |
34898 |
+ |
(CAGTT)n |
Simple_repeat |
scaffold218 |
34882 |
34930 |
- |
RS14977 |
Unspecified |
scaffold218 |
37842 |
37892 |
- |
Copia-18_BD-I |
LTR/Copia |
scaffold218 |
38038 |
38074 |
+ |
(GTATAAT)n |
Simple_repeat |
scaffold218 |
38419 |
38447 |
+ |
(AACAA)n |
Simple_repeat |
scaffold218 |
39583 |
39609 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
40940 |
40975 |
+ |
(ATT)n |
Simple_repeat |
scaffold218 |
42045 |
42089 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
42159 |
42210 |
+ |
A-rich |
Low_complexity |
scaffold218 |
42253 |
42315 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
42469 |
42508 |
+ |
(AAAAT)n |
Simple_repeat |
scaffold218 |
42879 |
42914 |
+ |
A-rich |
Low_complexity |
scaffold218 |
44423 |
44564 |
- |
STOWAWAY41_OS |
DNA/TcMar-Stowaway |
scaffold218 |
45050 |
45061 |
+ |
(TAAAAAA)n |
Simple_repeat |
scaffold218 |
45062 |
45095 |
+ |
A-rich |
Low_complexity |
scaffold218 |
45626 |
45709 |
+ |
(CTGAA)n |
Simple_repeat |
scaffold218 |
45739 |
45801 |
+ |
(CTGAA)n |
Simple_repeat |
scaffold218 |
46334 |
46434 |
+ |
(ATTTT)n |
Simple_repeat |
scaffold218 |
48083 |
48191 |
- |
RS4475 |
Unspecified |
scaffold218 |
49737 |
49776 |
+ |
A-rich |
Low_complexity |
scaffold218 |
49975 |
50106 |
+ |
Gypsy-52_Mad-I |
LTR/Gypsy |
scaffold218 |
50146 |
50212 |
+ |
(AATAT)n |
Simple_repeat |
scaffold218 |
51705 |
51839 |
+ |
RS13868 |
Unspecified |
scaffold218 |
51987 |
52040 |
+ |
(TAATTA)n |
Simple_repeat |
scaffold218 |
52518 |
52781 |
- |
RS356 |
Unspecified |
scaffold218 |
52780 |
52946 |
+ |
RS1322 |
Unspecified |
scaffold218 |
53028 |
53059 |
+ |
A-rich |
Low_complexity |
scaffold218 |
53511 |
53536 |
+ |
(TAT)n |
Simple_repeat |
scaffold218 |
54183 |
54226 |
+ |
(ATTATAA)n |
Simple_repeat |
scaffold218 |
54829 |
54860 |
+ |
(TATTA)n |
Simple_repeat |
scaffold218 |
55670 |
55740 |
+ |
(TAA)n |
Simple_repeat |
scaffold218 |
56719 |
56793 |
+ |
(ATTATT)n |
Simple_repeat |
scaffold218 |
56937 |
57049 |
+ |
(TA)n |
Simple_repeat |
scaffold218 |
56993 |
57049 |
+ |
(TA)n |
Simple_repeat |
scaffold218 |
58352 |
58390 |
+ |
(TATGAAT)n |
Simple_repeat |
scaffold218 |
58576 |
58701 |
- |
RS16358 |
Unspecified |
scaffold218 |
58607 |
58853 |
+ |
RS1 |
Unspecified |
scaffold218 |
59181 |
59288 |
+ |
(ATTAT)n |
Simple_repeat |
scaffold218 |
59255 |
59288 |
+ |
(ATTAT)n |
Simple_repeat |
scaffold218 |
61440 |
61546 |
+ |
RS4475 |
Unspecified |
scaffold218 |
63550 |
63725 |
- |
Copia-3_PTri-I |
LTR/Copia |
scaffold218 |
65171 |
65219 |
+ |
A-rich |
Low_complexity |
scaffold218 |
66179 |
66217 |
+ |
(TAATT)n |
Simple_repeat |
scaffold218 |
66707 |
66852 |
- |
RS606 |
Unspecified |
scaffold218 |
67741 |
67799 |
+ |
(TTTA)n |
Simple_repeat |
scaffold218 |
69836 |
69872 |
+ |
A-rich |
Low_complexity |
scaffold218 |
70093 |
70139 |
- |
RS5679 |
Unspecified |
scaffold218 |
70335 |
70377 |
+ |
A-rich |
Low_complexity |
scaffold218 |
70799 |
71417 |
+ |
PL543 |
Unspecified |
scaffold218 |
71531 |
71595 |
+ |
(AAAAT)n |
Simple_repeat |
scaffold218 |
71889 |
72110 |
+ |
(CTGAA)n |
Simple_repeat |
scaffold218 |
72351 |
72397 |
+ |
A-rich |
Low_complexity |
scaffold218 |
72527 |
72612 |
+ |
(ATTGA)n |
Simple_repeat |
scaffold218 |
72831 |
72911 |
+ |
RS3077 |
Unspecified |
scaffold218 |
77410 |
77661 |
- |
RS193 |
Unspecified |
scaffold218 |
77896 |
78069 |
+ |
SHAMET |
DNA/TcMar-Stowaway |
scaffold218 |
78322 |
78344 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
78636 |
78662 |
+ |
(TGA)n |
Simple_repeat |
scaffold218 |
79881 |
80031 |
+ |
RS8097 |
Unspecified |
scaffold218 |
80500 |
80594 |
+ |
RS16358 |
Unspecified |
scaffold218 |
80564 |
80601 |
+ |
RS1 |
Unspecified |
scaffold218 |
80818 |
80877 |
+ |
GA-rich |
Low_complexity |
scaffold218 |
81139 |
81165 |
+ |
(TGA)n |
Simple_repeat |
scaffold218 |
82458 |
82608 |
+ |
RS8097 |
Unspecified |
scaffold218 |
85179 |
85219 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
85861 |
85882 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
92129 |
92392 |
+ |
RS10 |
Unspecified |
scaffold218 |
92803 |
92832 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
93271 |
93429 |
+ |
RS55 |
Unspecified |
scaffold218 |
93294 |
93658 |
+ |
RS600 |
Unspecified |
scaffold218 |
93793 |
93876 |
+ |
RS18361 |
Unspecified |
scaffold218 |
95778 |
96022 |
+ |
RS4 |
Unspecified |
scaffold218 |
96125 |
96148 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
96149 |
96512 |
+ |
RS614 |
Unspecified |
scaffold218 |
99344 |
99441 |
+ |
LTR-7_Mad-LTR |
LTR |
scaffold218 |
100019 |
100056 |
+ |
A-rich |
Low_complexity |
scaffold218 |
100202 |
100231 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
100457 |
100479 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
101258 |
101276 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
101782 |
101912 |
+ |
RS18169 |
Unspecified |
scaffold218 |
102017 |
102170 |
+ |
RS14803 |
Unspecified |
scaffold218 |
102739 |
102927 |
+ |
RS16892 |
Unspecified |
scaffold218 |
103031 |
103232 |
+ |
RS18362 |
Unspecified |
scaffold218 |
103882 |
103904 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
104679 |
104701 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
105289 |
105349 |
+ |
(TTAAGTTT)n |
Simple_repeat |
scaffold218 |
106029 |
106159 |
+ |
RS18169 |
Unspecified |
scaffold218 |
106265 |
106418 |
+ |
RS14803 |
Unspecified |
scaffold218 |
106987 |
107175 |
+ |
RS16892 |
Unspecified |
scaffold218 |
107279 |
107480 |
+ |
RS18362 |
Unspecified |
scaffold218 |
108130 |
108152 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
109450 |
109512 |
+ |
RS16320 |
Unspecified |
scaffold218 |
111299 |
111330 |
+ |
(TTGTT)n |
Simple_repeat |
scaffold218 |
111480 |
111580 |
+ |
RS17730 |
Unspecified |
scaffold218 |
111668 |
111833 |
+ |
RS15429 |
Unspecified |
scaffold218 |
111877 |
112084 |
+ |
RS18165 |
Unspecified |
scaffold218 |
112141 |
112251 |
+ |
RS17369 |
Unspecified |
scaffold218 |
112332 |
112504 |
- |
RS5847 |
Unspecified |
scaffold218 |
115120 |
115158 |
+ |
(TCT)n |
Simple_repeat |
scaffold218 |
115260 |
115467 |
+ |
RS15530 |
Unspecified |
scaffold218 |
115855 |
116053 |
+ |
RS915 |
Unspecified |
scaffold218 |
116881 |
116908 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
117394 |
117425 |
+ |
(TTGTT)n |
Simple_repeat |
scaffold218 |
117575 |
117675 |
+ |
RS17730 |
Unspecified |
scaffold218 |
117763 |
117928 |
+ |
RS15429 |
Unspecified |
scaffold218 |
117972 |
118179 |
+ |
RS18165 |
Unspecified |
scaffold218 |
118236 |
118346 |
+ |
RS17369 |
Unspecified |
scaffold218 |
118427 |
118599 |
- |
RS5847 |
Unspecified |
scaffold218 |
120246 |
120509 |
+ |
RS102 |
Unspecified |
scaffold218 |
120302 |
120509 |
- |
RS7234 |
Unspecified |
scaffold218 |
121222 |
121485 |
- |
RS10 |
Unspecified |
scaffold218 |
121507 |
121547 |
+ |
(TAATA)n |
Simple_repeat |
scaffold218 |
121738 |
121776 |
+ |
(TCT)n |
Simple_repeat |
scaffold218 |
121878 |
122085 |
+ |
RS15530 |
Unspecified |
scaffold218 |
123603 |
123734 |
+ |
RS14113 |
Unspecified |
scaffold218 |
124567 |
124615 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
126037 |
126093 |
- |
RS3756 |
Unspecified |
scaffold218 |
128865 |
128883 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
133922 |
133963 |
+ |
(CCG)n |
Simple_repeat |
scaffold218 |
134170 |
134214 |
+ |
(ATT)n |
Simple_repeat |
scaffold218 |
134636 |
134670 |
+ |
(CT)n |
Simple_repeat |
scaffold218 |
134689 |
134751 |
+ |
(TTA)n |
Simple_repeat |
scaffold218 |
134794 |
134828 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
135382 |
135411 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
135609 |
135633 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
136915 |
137065 |
- |
RS17860 |
Unspecified |
scaffold218 |
137104 |
137251 |
- |
RS17860 |
Unspecified |
scaffold218 |
137424 |
137459 |
+ |
(TCTCTT)n |
Simple_repeat |
scaffold218 |
137644 |
137691 |
- |
RS736 |
Unspecified |
scaffold218 |
137693 |
137898 |
+ |
RS86 |
Unspecified |
scaffold218 |
137942 |
138027 |
- |
RS736 |
Unspecified |
scaffold218 |
138188 |
138212 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
138222 |
138327 |
+ |
RS14418 |
Unspecified |
scaffold218 |
138234 |
138339 |
- |
RS16836 |
Unspecified |
scaffold218 |
138236 |
138327 |
+ |
RS4475 |
Unspecified |
scaffold218 |
138348 |
138448 |
+ |
RS4475 |
Unspecified |
scaffold218 |
139256 |
139314 |
+ |
(ATA)n |
Simple_repeat |
scaffold218 |
139400 |
139825 |
+ |
PL3 |
Unspecified |
scaffold218 |
139951 |
139970 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
140258 |
140420 |
+ |
RS14599 |
Unspecified |
scaffold218 |
140428 |
140703 |
- |
RS7942 |
Unspecified |
scaffold218 |
140873 |
140923 |
+ |
G-rich |
Low_complexity |
scaffold218 |
141101 |
141149 |
+ |
RS12885 |
Unspecified |
scaffold218 |
141107 |
141163 |
+ |
RS606 |
Unspecified |
scaffold218 |
141335 |
141356 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
142263 |
142329 |
+ |
(ATA)n |
Simple_repeat |
scaffold218 |
142527 |
142546 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
142790 |
142978 |
+ |
RS429 |
Unspecified |
scaffold218 |
143080 |
143137 |
+ |
(TAACTAG)n |
Simple_repeat |
scaffold218 |
143228 |
143503 |
- |
RS7942 |
Unspecified |
scaffold218 |
143661 |
143702 |
+ |
(GGTGCG)n |
Simple_repeat |
scaffold218 |
144025 |
144053 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
144168 |
144344 |
+ |
RS5 |
Unspecified |
scaffold218 |
144565 |
144677 |
- |
RS15162 |
Unspecified |
scaffold218 |
144580 |
144692 |
- |
RS16382 |
Unspecified |
scaffold218 |
144793 |
144886 |
- |
RS4475 |
Unspecified |
scaffold218 |
144934 |
144960 |
+ |
(TA)n |
Simple_repeat |
scaffold218 |
144968 |
145003 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
145510 |
145612 |
- |
RS15118 |
Unspecified |
scaffold218 |
145521 |
145633 |
+ |
PL754 |
Unspecified |
scaffold218 |
145525 |
145618 |
+ |
RS16382 |
Unspecified |
scaffold218 |
146525 |
146560 |
+ |
A-rich |
Low_complexity |
scaffold218 |
146954 |
147070 |
+ |
(TTGAT)n |
Simple_repeat |
scaffold218 |
149820 |
149884 |
+ |
(TTCAG)n |
Simple_repeat |
scaffold218 |
149909 |
149962 |
+ |
(TTCAG)n |
Simple_repeat |
scaffold218 |
150101 |
151542 |
- |
RIRE1_I-int |
LTR/Copia |
scaffold218 |
151559 |
152734 |
- |
RIRE1_I-int |
LTR/Copia |
scaffold218 |
151559 |
152658 |
- |
RIRE1_I-int |
LTR/Copia |
scaffold218 |
152620 |
152734 |
+ |
RS13850 |
Unspecified |
scaffold218 |
153096 |
153303 |
- |
RS13321 |
Unspecified |
scaffold218 |
154200 |
154326 |
+ |
PL405 |
Unspecified |
scaffold218 |
154324 |
154757 |
+ |
RS220 |
Unspecified |
scaffold218 |
155038 |
155196 |
+ |
RS17418 |
Unspecified |
scaffold218 |
155323 |
155502 |
+ |
RS16134 |
Unspecified |
scaffold218 |
155703 |
155833 |
+ |
RS14943 |
Unspecified |
scaffold218 |
156063 |
156193 |
+ |
RS15921 |
Unspecified |
scaffold218 |
156586 |
156755 |
+ |
RS14863 |
Unspecified |
scaffold218 |
157163 |
157325 |
+ |
RS16562 |
Unspecified |
scaffold218 |
157569 |
157673 |
+ |
RS15807 |
Unspecified |
scaffold218 |
157675 |
157828 |
+ |
RS15942 |
Unspecified |
scaffold218 |
158130 |
158157 |
+ |
(TGATA)n |
Simple_repeat |
scaffold218 |
158702 |
158758 |
- |
RS15498 |
Unspecified |
scaffold218 |
159593 |
159643 |
+ |
A-rich |
Low_complexity |
scaffold218 |
160303 |
160447 |
- |
RS578 |
Unspecified |
scaffold218 |
160763 |
160789 |
+ |
A-rich |
Low_complexity |
scaffold218 |
161132 |
161216 |
- |
RS7853 |
Unspecified |
scaffold218 |
161608 |
161764 |
+ |
RS3882 |
Unspecified |
scaffold218 |
162432 |
162563 |
- |
RS578 |
Unspecified |
scaffold218 |
163138 |
163184 |
+ |
RS3882 |
Unspecified |
scaffold218 |
164532 |
164562 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
164645 |
164765 |
+ |
(AATT)n |
Simple_repeat |
scaffold218 |
164978 |
165046 |
+ |
(TTTAT)n |
Simple_repeat |
scaffold218 |
165549 |
165707 |
+ |
RS17418 |
Unspecified |
scaffold218 |
165834 |
166013 |
+ |
RS16134 |
Unspecified |
scaffold218 |
166214 |
166344 |
+ |
RS14943 |
Unspecified |
scaffold218 |
166574 |
166704 |
+ |
RS15921 |
Unspecified |
scaffold218 |
167098 |
167267 |
+ |
RS14863 |
Unspecified |
scaffold218 |
167675 |
167837 |
+ |
RS16562 |
Unspecified |
scaffold218 |
168081 |
168185 |
+ |
RS15807 |
Unspecified |
scaffold218 |
168187 |
168340 |
+ |
RS15942 |
Unspecified |
scaffold218 |
173189 |
173237 |
+ |
A-rich |
Low_complexity |
scaffold218 |
173342 |
173411 |
+ |
(TTG)n |
Simple_repeat |
scaffold218 |
173611 |
173798 |
+ |
(AGCTG)n |
Simple_repeat |
scaffold218 |
174182 |
174213 |
+ |
A-rich |
Low_complexity |
scaffold218 |
174517 |
174566 |
+ |
(AACAC)n |
Simple_repeat |
scaffold218 |
175218 |
175279 |
+ |
(GTTGAT)n |
Simple_repeat |
scaffold218 |
175280 |
175298 |
+ |
(TGT)n |
Simple_repeat |
scaffold218 |
175434 |
175462 |
+ |
(GAT)n |
Simple_repeat |
scaffold218 |
176731 |
176834 |
+ |
RS13285 |
Unspecified |
scaffold218 |
177502 |
177579 |
+ |
(TTA)n |
Simple_repeat |
scaffold218 |
177931 |
178077 |
+ |
RS10474 |
Unspecified |
scaffold218 |
179164 |
179204 |
+ |
(TATCAAT)n |
Simple_repeat |
scaffold218 |
179574 |
179614 |
+ |
(ACGAAG)n |
Simple_repeat |
scaffold218 |
179702 |
179720 |
+ |
(AAT)n |
Simple_repeat |
scaffold218 |
180351 |
180400 |
+ |
(ATCC)n |
Simple_repeat |
scaffold218 |
182569 |
182603 |
+ |
(TCT)n |
Simple_repeat |
scaffold218 |
184045 |
184191 |
- |
RS10474 |
Unspecified |
scaffold218 |
184233 |
184268 |
+ |
(ATTG)n |
Simple_repeat |
scaffold218 |
184652 |
184705 |
- |
RS14977 |
Unspecified |
scaffold218 |
184655 |
184727 |
- |
RS3521 |
Unspecified |
scaffold218 |
184742 |
184815 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
187763 |
187786 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
188035 |
188118 |
+ |
(ACATAA)n |
Simple_repeat |
scaffold218 |
188242 |
188347 |
+ |
(CGG)n |
Simple_repeat |
scaffold218 |
188488 |
188532 |
+ |
(TAA)n |
Simple_repeat |
scaffold218 |
188533 |
188543 |
+ |
(AATTAT)n |
Simple_repeat |
scaffold218 |
188544 |
188573 |
+ |
(ATG)n |
Simple_repeat |
scaffold218 |
188629 |
188677 |
+ |
GA-rich |
Low_complexity |
scaffold218 |
188995 |
189033 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
189212 |
189249 |
+ |
(TTATT)n |
Simple_repeat |
scaffold218 |
189325 |
189372 |
+ |
A-rich |
Low_complexity |
scaffold218 |
189433 |
189467 |
+ |
(TAA)n |
Simple_repeat |
scaffold218 |
189613 |
189639 |
+ |
A-rich |
Low_complexity |
scaffold218 |
189823 |
189886 |
+ |
(ATTAA)n |
Simple_repeat |
scaffold218 |
190325 |
190385 |
+ |
A-rich |
Low_complexity |
scaffold218 |
190880 |
190968 |
+ |
(TAAT)n |
Simple_repeat |
scaffold218 |
191146 |
191184 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
191476 |
191562 |
+ |
(TAA)n |
Simple_repeat |
scaffold218 |
193589 |
193608 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
193996 |
194066 |
+ |
A-rich |
Low_complexity |
scaffold218 |
194084 |
194347 |
+ |
RS17600 |
Unspecified |
scaffold218 |
194681 |
195519 |
- |
RS4526 |
Unspecified |
scaffold218 |
195576 |
195607 |
+ |
GA-rich |
Low_complexity |
scaffold218 |
196594 |
196629 |
+ |
(TAA)n |
Simple_repeat |
scaffold218 |
197228 |
197246 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
197253 |
197357 |
+ |
RS2339 |
Unspecified |
scaffold218 |
197593 |
197631 |
+ |
(ATTAAC)n |
Simple_repeat |
scaffold218 |
197704 |
197777 |
+ |
RS2339 |
Unspecified |
scaffold218 |
202094 |
202112 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
202288 |
202321 |
+ |
(TAATTA)n |
Simple_repeat |
scaffold218 |
202386 |
202931 |
+ |
PL284 |
Unspecified |
scaffold218 |
203247 |
203300 |
+ |
(AATTTTT)n |
Simple_repeat |
scaffold218 |
203846 |
203936 |
- |
LTR-7_Mad-LTR |
LTR |
scaffold218 |
204752 |
205065 |
+ |
RS1456 |
Unspecified |
scaffold218 |
204770 |
205124 |
+ |
RS3550 |
Unspecified |
scaffold218 |
208111 |
208220 |
- |
RS16382 |
Unspecified |
scaffold218 |
209655 |
209722 |
+ |
(ATTATA)n |
Simple_repeat |
scaffold218 |
210068 |
210101 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
210102 |
210157 |
- |
BvL1 |
LINE/L1 |
scaffold218 |
210277 |
210300 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
210478 |
210608 |
- |
RS5624 |
Unspecified |
scaffold218 |
211219 |
211267 |
+ |
(GATACAT)n |
Simple_repeat |
scaffold218 |
211257 |
211312 |
+ |
(ATTAA)n |
Simple_repeat |
scaffold218 |
212812 |
212839 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
213689 |
213751 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
214442 |
214502 |
- |
RS56 |
Unspecified |
scaffold218 |
214530 |
214714 |
+ |
RS454 |
Unspecified |
scaffold218 |
215174 |
215195 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
215890 |
216618 |
+ |
RS454 |
Unspecified |
scaffold218 |
216637 |
216786 |
+ |
RS1801 |
Unspecified |
scaffold218 |
217278 |
218670 |
- |
RS211 |
Unspecified |
scaffold218 |
218965 |
219018 |
+ |
(TGT)n |
Simple_repeat |
scaffold218 |
221397 |
221454 |
+ |
RS4201 |
Unspecified |
scaffold218 |
221461 |
221499 |
+ |
(TATG)n |
Simple_repeat |
scaffold218 |
221613 |
221762 |
+ |
RS1801 |
Unspecified |
scaffold218 |
223562 |
223635 |
- |
HAT-10_Mad |
DNA/hAT-Ac |
scaffold218 |
223950 |
224045 |
+ |
(CCGAC)n |
Simple_repeat |
scaffold218 |
224076 |
224130 |
+ |
(ATTT)n |
Simple_repeat |
scaffold218 |
224888 |
225022 |
+ |
RS1801 |
Unspecified |
scaffold218 |
226934 |
227095 |
+ |
(AGCTG)n |
Simple_repeat |
scaffold218 |
227111 |
227258 |
+ |
RS1801 |
Unspecified |
scaffold218 |
228779 |
228868 |
+ |
LTR-7_Mad-LTR |
LTR |
scaffold218 |
228926 |
229058 |
- |
PL727 |
Unspecified |
scaffold218 |
229323 |
229379 |
+ |
Copia2-SB_I-int |
LTR/Copia |
scaffold218 |
229534 |
229606 |
- |
RS683 |
Unspecified |
scaffold218 |
229981 |
230004 |
+ |
(CTTT)n |
Simple_repeat |
scaffold218 |
230052 |
230274 |
- |
Copia-66_GM-I |
LTR/Copia |
scaffold218 |
230277 |
230378 |
- |
Copia-66_GM-I |
LTR/Copia |
scaffold218 |
230634 |
230871 |
+ |
(CCCGA)n |
Simple_repeat |
scaffold218 |
231067 |
231226 |
+ |
(CCCGA)n |
Simple_repeat |
scaffold218 |
231549 |
231590 |
- |
Copia-66_GM-I |
LTR/Copia |
scaffold218 |
231853 |
231998 |
+ |
RS1801 |
Unspecified |
scaffold218 |
233654 |
233766 |
+ |
(ACTCG)n |
Simple_repeat |
scaffold218 |
233976 |
234100 |
- |
RS8821 |
Unspecified |
scaffold218 |
234029 |
234325 |
- |
RS8821 |
Unspecified |
scaffold218 |
235453 |
235477 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
235941 |
235999 |
+ |
(TTTG)n |
Simple_repeat |
scaffold218 |
236044 |
236080 |
+ |
(TTTAAT)n |
Simple_repeat |
scaffold218 |
236451 |
236493 |
+ |
(TTTTAA)n |
Simple_repeat |
scaffold218 |
236583 |
236588 |
+ |
(TAAAAA)n |
Simple_repeat |
scaffold218 |
236589 |
236625 |
+ |
A-rich |
Low_complexity |
scaffold218 |
238739 |
238886 |
+ |
RS1801 |
Unspecified |
scaffold218 |
239796 |
240027 |
+ |
RS8932 |
Unspecified |
scaffold218 |
240647 |
240873 |
+ |
RS18 |
Unspecified |
scaffold218 |
241163 |
241209 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
241475 |
241777 |
- |
RS8821 |
Unspecified |
scaffold218 |
242613 |
242870 |
+ |
RS11927 |
Unspecified |
scaffold218 |
243239 |
243264 |
+ |
(AAAAT)n |
Simple_repeat |
scaffold218 |
243822 |
244032 |
+ |
RS4 |
Unspecified |
scaffold218 |
244278 |
244358 |
- |
Copia-3_PTri-I |
LTR/Copia |
scaffold218 |
244514 |
244547 |
+ |
GA-rich |
Low_complexity |
scaffold218 |
244620 |
244639 |
+ |
(ACC)n |
Simple_repeat |
scaffold218 |
244992 |
245068 |
+ |
RS10345 |
Unspecified |
scaffold218 |
245957 |
246054 |
+ |
RS11927 |
Unspecified |
scaffold218 |
246204 |
246247 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
246538 |
246551 |
+ |
A-rich |
Low_complexity |
scaffold218 |
246552 |
246583 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
246584 |
246625 |
+ |
A-rich |
Low_complexity |
scaffold218 |
246929 |
246964 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
247475 |
247661 |
+ |
RS12830 |
Unspecified |
scaffold218 |
247753 |
247899 |
+ |
RS10345 |
Unspecified |
scaffold218 |
248282 |
248533 |
+ |
RS14704 |
Unspecified |
scaffold218 |
248733 |
248853 |
+ |
RS9952 |
Unspecified |
scaffold218 |
249067 |
249599 |
+ |
RS11778 |
Unspecified |
scaffold218 |
251096 |
251510 |
- |
RS2491 |
Unspecified |
scaffold218 |
251795 |
252176 |
- |
RS4035 |
Unspecified |
scaffold218 |
252837 |
253379 |
- |
RS2892 |
Unspecified |
scaffold218 |
253364 |
253521 |
- |
Copia-3_PTri-I |
LTR/Copia |
scaffold218 |
253836 |
253931 |
+ |
(TTA)n |
Simple_repeat |
scaffold218 |
253979 |
254411 |
+ |
(AACTG)n |
Simple_repeat |
scaffold218 |
254530 |
254679 |
+ |
(CCCGA)n |
Simple_repeat |
scaffold218 |
254744 |
254870 |
+ |
RS10164 |
Unspecified |
scaffold218 |
255116 |
255170 |
+ |
(AATA)n |
Simple_repeat |
scaffold218 |
255451 |
255819 |
- |
RS8 |
Unspecified |
scaffold218 |
256051 |
256172 |
- |
RS16771 |
Unspecified |
scaffold218 |
257115 |
257333 |
- |
RS3119 |
Unspecified |
scaffold218 |
259351 |
259379 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
259380 |
259414 |
+ |
(ATTTTTG)n |
Simple_repeat |
scaffold218 |
259521 |
259541 |
+ |
(ATA)n |
Simple_repeat |
scaffold218 |
259846 |
259870 |
+ |
(CTT)n |
Simple_repeat |
scaffold218 |
259902 |
259935 |
+ |
(TTTCGT)n |
Simple_repeat |
scaffold218 |
260856 |
261000 |
- |
RS221 |
Unspecified |
scaffold218 |
261213 |
261429 |
+ |
RS11927 |
Unspecified |
scaffold218 |
261600 |
261646 |
+ |
(AAGGTC)n |
Simple_repeat |
scaffold218 |
261840 |
261863 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
261914 |
262001 |
+ |
RS1974 |
Unspecified |
scaffold218 |
262339 |
262620 |
+ |
RS10425 |
Unspecified |
scaffold218 |
262958 |
263277 |
- |
PL526 |
Unspecified |
scaffold218 |
264850 |
264990 |
+ |
RS1801 |
Unspecified |
scaffold218 |
264892 |
265067 |
- |
RS8821 |
Unspecified |
scaffold218 |
266902 |
266923 |
+ |
(TTA)n |
Simple_repeat |
scaffold218 |
267351 |
267382 |
+ |
(TTC)n |
Simple_repeat |
scaffold218 |
267972 |
268016 |
+ |
A-rich |
Low_complexity |
scaffold218 |
268528 |
268574 |
+ |
(ATATTTT)n |
Simple_repeat |
scaffold218 |
268626 |
268678 |
- |
RS18371 |
Unspecified |
scaffold218 |
268706 |
268775 |
- |
RS9448 |
Unspecified |
scaffold218 |
269559 |
269878 |
- |
RS6274 |
Unspecified |
scaffold218 |
270559 |
271223 |
+ |
RS458 |
Unspecified |
scaffold218 |
271437 |
271539 |
+ |
(TAT)n |
Simple_repeat |
scaffold218 |
271511 |
271555 |
+ |
(TATTT)n |
Simple_repeat |
scaffold218 |
272349 |
272381 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
273739 |
273996 |
+ |
RS11927 |
Unspecified |
scaffold218 |
274363 |
274388 |
+ |
(AAAAT)n |
Simple_repeat |
scaffold218 |
274464 |
274494 |
+ |
G-rich |
Low_complexity |
scaffold218 |
274638 |
274665 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
275163 |
275257 |
+ |
RS4475 |
Unspecified |
scaffold218 |
276051 |
276089 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
276297 |
276376 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
276449 |
276541 |
+ |
(ACC)n |
Simple_repeat |
scaffold218 |
276557 |
276743 |
+ |
RS12830 |
Unspecified |
scaffold218 |
276836 |
276982 |
+ |
RS10345 |
Unspecified |
scaffold218 |
277365 |
277616 |
+ |
RS14704 |
Unspecified |
scaffold218 |
277827 |
277947 |
+ |
RS9952 |
Unspecified |
scaffold218 |
278107 |
278306 |
+ |
RS11778 |
Unspecified |
scaffold218 |
278346 |
278687 |
+ |
RS11778 |
Unspecified |
scaffold218 |
280475 |
280806 |
- |
Copia-10_TC-I |
LTR/Copia |
scaffold218 |
280932 |
281324 |
- |
COPIA-I_MT |
LTR/Copia |
scaffold218 |
281394 |
283424 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
scaffold218 |
282066 |
282103 |
+ |
(TTCAGTT)n |
Simple_repeat |
scaffold218 |
282543 |
282638 |
- |
Gypsy65-ZM_I-int |
LTR/Gypsy |
scaffold218 |
282976 |
283188 |
- |
TORTL1 |
LTR/Copia |
scaffold218 |
283552 |
283602 |
- |
Copia10-VV_LTR |
LTR/Copia |
scaffold218 |
284218 |
284803 |
- |
RS3121 |
Unspecified |
scaffold218 |
284396 |
284803 |
+ |
RS2174 |
Unspecified |
scaffold218 |
286182 |
286234 |
+ |
Copia-84_VV-I |
LTR/Copia |
scaffold218 |
286533 |
286560 |
+ |
(ATTT)n |
Simple_repeat |
scaffold218 |
286662 |
286682 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
286839 |
287019 |
- |
RS5 |
Unspecified |
scaffold218 |
287356 |
287408 |
- |
RS18371 |
Unspecified |
scaffold218 |
288553 |
288686 |
- |
PL6 |
Unspecified |
scaffold218 |
289199 |
289234 |
+ |
(ATTA)n |
Simple_repeat |
scaffold218 |
289259 |
289378 |
- |
RS6886 |
Unspecified |
scaffold218 |
289450 |
289482 |
+ |
(TAC)n |
Simple_repeat |
scaffold218 |
289633 |
289700 |
+ |
(TAAT)n |
Simple_repeat |
scaffold218 |
289942 |
289988 |
+ |
(ATATTTT)n |
Simple_repeat |
scaffold218 |
290040 |
290092 |
- |
RS18371 |
Unspecified |
scaffold218 |
290753 |
290828 |
+ |
(AGTTC)n |
Simple_repeat |
scaffold218 |
291062 |
291089 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
292444 |
292701 |
+ |
RS11927 |
Unspecified |
scaffold218 |
293053 |
293138 |
+ |
RS191 |
Unspecified |
scaffold218 |
293063 |
293138 |
+ |
RS7380 |
Unspecified |
scaffold218 |
293077 |
293202 |
+ |
RS714 |
Unspecified |
scaffold218 |
293647 |
293677 |
+ |
(CTCCC)n |
Simple_repeat |
scaffold218 |
293929 |
293945 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
294152 |
294202 |
+ |
RS7380 |
Unspecified |
scaffold218 |
294898 |
295168 |
- |
RS714 |
Unspecified |
scaffold218 |
295112 |
295182 |
- |
RS7380 |
Unspecified |
scaffold218 |
295330 |
295516 |
+ |
RS12830 |
Unspecified |
scaffold218 |
295567 |
295712 |
+ |
RS10345 |
Unspecified |
scaffold218 |
295808 |
296059 |
+ |
RS14704 |
Unspecified |
scaffold218 |
296263 |
296383 |
+ |
RS9952 |
Unspecified |
scaffold218 |
296500 |
297035 |
+ |
RS11778 |
Unspecified |
scaffold218 |
298502 |
298886 |
- |
RS2491 |
Unspecified |
scaffold218 |
300358 |
300415 |
- |
SINE2-1_STu |
SINE/tRNA |
scaffold218 |
300978 |
301120 |
- |
RS221 |
Unspecified |
scaffold218 |
301152 |
301294 |
- |
PL825 |
Unspecified |
scaffold218 |
301298 |
301446 |
- |
RS2666 |
Unspecified |
scaffold218 |
301447 |
301518 |
- |
RS1469 |
Unspecified |
scaffold218 |
302570 |
302945 |
- |
RS4035 |
Unspecified |
scaffold218 |
302635 |
302979 |
+ |
RS4501 |
Unspecified |
scaffold218 |
303548 |
303601 |
+ |
A-rich |
Low_complexity |
scaffold218 |
303822 |
303856 |
+ |
(CTTCTCC)n |
Simple_repeat |
scaffold218 |
303963 |
303991 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
304152 |
304219 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
304947 |
304982 |
+ |
(CCTCTTT)n |
Simple_repeat |
scaffold218 |
305279 |
305299 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
305679 |
305727 |
+ |
(TTATTA)n |
Simple_repeat |
scaffold218 |
305732 |
305771 |
+ |
A-rich |
Low_complexity |
scaffold218 |
305783 |
305886 |
+ |
RS3613 |
Unspecified |
scaffold218 |
305903 |
306000 |
- |
RS16382 |
Unspecified |
scaffold218 |
305911 |
306023 |
- |
PL436 |
Unspecified |
scaffold218 |
305999 |
306189 |
- |
RS1188 |
Unspecified |
scaffold218 |
306280 |
306526 |
+ |
RS16888 |
Unspecified |
scaffold218 |
306881 |
306915 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
307397 |
307424 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
308847 |
308872 |
+ |
(AT)n |
Simple_repeat |
scaffold218 |
309930 |
310278 |
- |
PL31 |
Unspecified |
scaffold218 |
310267 |
310398 |
- |
PL31 |
Unspecified |
scaffold218 |
310282 |
310399 |
- |
RS450 |
Unspecified |
scaffold218 |
310945 |
311200 |
+ |
RS586 |
Unspecified |
scaffold218 |
311168 |
311224 |
+ |
RS16836 |
Unspecified |
scaffold218 |
311659 |
311686 |
+ |
A-rich |
Low_complexity |
scaffold218 |
311687 |
311720 |
+ |
(AATAA)n |
Simple_repeat |
scaffold218 |
311862 |
311954 |
- |
Copia-3_PTri-I |
LTR/Copia |
scaffold218 |
313803 |
313947 |
+ |
RS115 |
Unspecified |
scaffold218 |
314681 |
314938 |
+ |
RS356 |
Unspecified |
scaffold218 |
314975 |
315432 |
+ |
RS1508 |
Unspecified |
scaffold218 |
315428 |
315483 |
+ |
Copia-66_GM-I |
LTR/Copia |
scaffold218 |
315729 |
315750 |
+ |
(TTA)n |
Simple_repeat |
scaffold218 |
316035 |
316127 |
+ |
Copia-66_GM-I |
LTR/Copia |
scaffold218 |
316164 |
320145 |
+ |
Copia-66_GM-I |
LTR/Copia |
scaffold218 |
320144 |
321166 |
+ |
Copia-66_GM-I |
LTR/Copia |
scaffold218 |
321166 |
321576 |
+ |
RS1508 |
Unspecified |
scaffold218 |
321578 |
321770 |
+ |
RS4690 |
Unspecified |
scaffold218 |
321838 |
322330 |
+ |
Copia-45_ZM-I |
LTR/Copia |
scaffold218 |
324392 |
324452 |
+ |
(TATTAAT)n |
Simple_repeat |
scaffold218 |
325092 |
325143 |
+ |
A-rich |
Low_complexity |
scaffold218 |
325144 |
325172 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
325360 |
325389 |
+ |
(GGGTC)n |
Simple_repeat |
scaffold218 |
326232 |
326408 |
+ |
RS5 |
Unspecified |
scaffold218 |
326787 |
327036 |
+ |
RS356 |
Unspecified |
scaffold218 |
327014 |
327073 |
+ |
RS5596 |
Unspecified |
scaffold218 |
327295 |
327347 |
+ |
(AAT)n |
Simple_repeat |
scaffold218 |
327830 |
327995 |
+ |
(AACTG)n |
Simple_repeat |
scaffold218 |
328961 |
328990 |
+ |
(ATTATA)n |
Simple_repeat |
scaffold218 |
330340 |
330357 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
331236 |
331273 |
+ |
(TTT)n |
Simple_repeat |
scaffold218 |
331311 |
331568 |
+ |
RS1 |
Unspecified |
scaffold218 |
332216 |
332477 |
+ |
RS26 |
Unspecified |
scaffold218 |
332710 |
332817 |
+ |
RS3146 |
Unspecified |
scaffold218 |
333139 |
333628 |
- |
PL6 |
Unspecified |
scaffold218 |
333986 |
334167 |
- |
RS79 |
Unspecified |
scaffold218 |
335340 |
335377 |
+ |
(ATAATA)n |
Simple_repeat |
scaffold218 |
335782 |
335826 |
+ |
A-rich |
Low_complexity |
scaffold218 |
336181 |
336279 |
- |
RS3380 |
Unspecified |
scaffold218 |
337187 |
337206 |
+ |
(AAC)n |
Simple_repeat |
scaffold218 |
337358 |
337378 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
337757 |
337803 |
+ |
(AATATT)n |
Simple_repeat |
scaffold218 |
338414 |
338444 |
+ |
(TAT)n |
Simple_repeat |
scaffold218 |
340279 |
340333 |
+ |
(GTAT)n |
Simple_repeat |
scaffold218 |
340394 |
340419 |
+ |
(ACC)n |
Simple_repeat |
scaffold218 |
340876 |
341138 |
- |
RS356 |
Unspecified |
scaffold218 |
342219 |
342281 |
+ |
RS1258 |
Unspecified |
scaffold218 |
342219 |
342291 |
- |
RS13064 |
Unspecified |
scaffold218 |
342891 |
342925 |
+ |
(AGTTC)n |
Simple_repeat |
scaffold218 |
343333 |
343408 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
343544 |
343816 |
- |
RS1 |
Unspecified |
scaffold218 |
343840 |
343862 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
344111 |
344297 |
+ |
(CTGAA)n |
Simple_repeat |
scaffold218 |
344363 |
344526 |
- |
RS8611 |
Unspecified |
scaffold218 |
344967 |
345209 |
+ |
(CTGAA)n |
Simple_repeat |
scaffold218 |
345855 |
346087 |
+ |
PL105 |
Unspecified |
scaffold218 |
346083 |
346167 |
+ |
PL105 |
Unspecified |
scaffold218 |
346908 |
346933 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
347110 |
347153 |
+ |
(GAATT)n |
Simple_repeat |
scaffold218 |
352515 |
352546 |
+ |
(ATTAAA)n |
Simple_repeat |
scaffold218 |
355316 |
355734 |
+ |
PL3 |
Unspecified |
scaffold218 |
356529 |
356582 |
+ |
(ATAA)n |
Simple_repeat |
scaffold218 |
356560 |
356583 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
358521 |
358566 |
+ |
(CAA)n |
Simple_repeat |
scaffold218 |
359584 |
359633 |
+ |
(CCA)n |
Simple_repeat |
scaffold218 |
359765 |
359787 |
+ |
(CAT)n |
Simple_repeat |
scaffold218 |
360024 |
360070 |
+ |
(CGG)n |
Simple_repeat |
scaffold218 |
360058 |
360132 |
+ |
(GCC)n |
Simple_repeat |
scaffold218 |
360268 |
360308 |
+ |
(CCA)n |
Simple_repeat |
scaffold218 |
360310 |
360355 |
+ |
(TACGAA)n |
Simple_repeat |
scaffold218 |
360449 |
360474 |
+ |
(GGT)n |
Simple_repeat |
scaffold218 |
360540 |
360628 |
+ |
(GGAGGT)n |
Simple_repeat |
scaffold218 |
360946 |
360969 |
+ |
(TGG)n |
Simple_repeat |
scaffold218 |
360996 |
361036 |
+ |
GA-rich |
Low_complexity |
scaffold218 |
361037 |
361069 |
+ |
A-rich |
Low_complexity |
scaffold218 |
361132 |
361158 |
+ |
(CCCAA)n |
Simple_repeat |
scaffold218 |
361250 |
361462 |
- |
RS1 |
Unspecified |
scaffold218 |
361460 |
361628 |
- |
RS1848 |
Unspecified |
scaffold218 |
361633 |
361669 |
- |
RS14977 |
Unspecified |
scaffold218 |
362075 |
362175 |
- |
RS3146 |
Unspecified |
scaffold218 |
362582 |
362775 |
- |
RS84 |
Unspecified |
scaffold218 |
363791 |
364304 |
- |
PL48 |
Unspecified |
scaffold218 |
364556 |
364576 |
+ |
(AAT)n |
Simple_repeat |
scaffold218 |
365077 |
365239 |
- |
RS1578 |
Unspecified |
scaffold218 |
365609 |
365648 |
+ |
A-rich |
Low_complexity |
scaffold218 |
366091 |
366112 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
366525 |
366556 |
+ |
A-rich |
Low_complexity |
scaffold218 |
367068 |
367144 |
+ |
(TAAT)n |
Simple_repeat |
scaffold218 |
367216 |
367252 |
- |
RS17699 |
Unspecified |
scaffold218 |
367220 |
367492 |
- |
RS1 |
Unspecified |
scaffold218 |
367688 |
367840 |
- |
RS3110 |
Unspecified |
scaffold218 |
367708 |
368266 |
+ |
RS1791 |
Unspecified |
scaffold218 |
367983 |
368384 |
+ |
RS539 |
Unspecified |
scaffold218 |
369315 |
369352 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
370036 |
370292 |
- |
RS1 |
Unspecified |
scaffold218 |
370649 |
370680 |
+ |
(TATAA)n |
Simple_repeat |
scaffold218 |
371141 |
371370 |
- |
RS5218 |
Unspecified |
scaffold218 |
371377 |
371421 |
+ |
A-rich |
Low_complexity |
scaffold218 |
371450 |
371499 |
+ |
(TTATTTT)n |
Simple_repeat |
scaffold218 |
371517 |
371598 |
+ |
RS2504 |
Unspecified |
scaffold218 |
371902 |
372350 |
+ |
PL2 |
Unspecified |
scaffold218 |
372865 |
372884 |
+ |
(TAC)n |
Simple_repeat |
scaffold218 |
372916 |
372955 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
373028 |
373053 |
+ |
(AGAT)n |
Simple_repeat |
scaffold218 |
374773 |
374811 |
+ |
A-rich |
Low_complexity |
scaffold218 |
374898 |
374995 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
375039 |
375098 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
375149 |
375172 |
+ |
(ATT)n |
Simple_repeat |
scaffold218 |
375402 |
375502 |
+ |
(ATTTTA)n |
Simple_repeat |
scaffold218 |
376213 |
376290 |
+ |
RS11389 |
Unspecified |
scaffold218 |
376235 |
376412 |
+ |
RS38 |
Unspecified |
scaffold218 |
381461 |
381513 |
+ |
GA-rich |
Low_complexity |
scaffold218 |
381622 |
381653 |
+ |
(TAATT)n |
Simple_repeat |
scaffold218 |
382023 |
382047 |
+ |
(CAGTT)n |
Simple_repeat |
scaffold218 |
382048 |
382097 |
+ |
(TTCAG)n |
Simple_repeat |
scaffold218 |
382098 |
382158 |
+ |
(CAGTT)n |
Simple_repeat |
scaffold218 |
387005 |
387041 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
387104 |
387132 |
+ |
(GGTG)n |
Simple_repeat |
scaffold218 |
387175 |
387227 |
+ |
(AATTTTA)n |
Simple_repeat |
scaffold218 |
387553 |
387688 |
+ |
TRAMET1 |
DNA/TcMar-Stowaway |
scaffold218 |
387973 |
387994 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
388076 |
388110 |
+ |
(ATT)n |
Simple_repeat |
scaffold218 |
388723 |
388889 |
+ |
RS4042 |
Unspecified |
scaffold218 |
388743 |
389044 |
- |
RS499 |
Unspecified |
scaffold218 |
389619 |
389669 |
+ |
A-rich |
Low_complexity |
scaffold218 |
390676 |
390703 |
+ |
(TTTCA)n |
Simple_repeat |
scaffold218 |
390917 |
390952 |
+ |
(GAATT)n |
Simple_repeat |
scaffold218 |
391155 |
391204 |
+ |
(AAT)n |
Simple_repeat |
scaffold218 |
391277 |
391555 |
- |
RS356 |
Unspecified |
scaffold218 |
391732 |
391988 |
+ |
RS1 |
Unspecified |
scaffold218 |
392735 |
392851 |
+ |
(TTTAA)n |
Simple_repeat |
scaffold218 |
393078 |
393280 |
+ |
RS4 |
Unspecified |
scaffold218 |
393297 |
393356 |
+ |
(GGACC)n |
Simple_repeat |
scaffold218 |
393458 |
393511 |
+ |
(GGTCC)n |
Simple_repeat |
scaffold218 |
393612 |
393663 |
+ |
RS4 |
Unspecified |
scaffold218 |
393995 |
394053 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
394053 |
394492 |
+ |
PL654 |
Unspecified |
scaffold218 |
395667 |
395683 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
397282 |
397327 |
+ |
(TTGTTAG)n |
Simple_repeat |
scaffold218 |
399329 |
399705 |
- |
RS9496 |
Unspecified |
scaffold218 |
400072 |
400088 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
400511 |
400593 |
+ |
PL517 |
Unspecified |
scaffold218 |
400538 |
400619 |
+ |
PL517 |
Unspecified |
scaffold218 |
400626 |
400834 |
+ |
RS4 |
Unspecified |
scaffold218 |
401387 |
401765 |
- |
RS9496 |
Unspecified |
scaffold218 |
402500 |
402539 |
+ |
(TC)n |
Simple_repeat |
scaffold218 |
403233 |
403257 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
403839 |
403996 |
+ |
RS1789 |
Unspecified |
scaffold218 |
404125 |
404168 |
+ |
(TAGTATT)n |
Simple_repeat |
scaffold218 |
405152 |
405281 |
- |
RS2542 |
Unspecified |
scaffold218 |
405532 |
405592 |
+ |
(CAACAAT)n |
Simple_repeat |
scaffold218 |
405663 |
405796 |
+ |
RS4028 |
Unspecified |
scaffold218 |
405837 |
405933 |
+ |
RS4028 |
Unspecified |
scaffold218 |
405909 |
406291 |
- |
RS2626 |
Unspecified |
scaffold218 |
406379 |
406462 |
+ |
PL517 |
Unspecified |
scaffold218 |
406406 |
406487 |
+ |
PL517 |
Unspecified |
scaffold218 |
406694 |
406756 |
- |
PL501 |
Unspecified |
scaffold218 |
406733 |
406790 |
+ |
PL501 |
Unspecified |
scaffold218 |
406882 |
406992 |
+ |
PL276 |
Unspecified |
scaffold218 |
407523 |
407837 |
- |
PL438 |
Unspecified |
scaffold218 |
408236 |
408497 |
+ |
RS26 |
Unspecified |
scaffold218 |
408586 |
408756 |
- |
RS9496 |
Unspecified |
scaffold218 |
409445 |
409891 |
- |
RS326 |
Unspecified |
scaffold218 |
410180 |
411166 |
- |
RS402 |
Unspecified |
scaffold218 |
411354 |
411407 |
+ |
Alfare1_I-int |
LTR/Copia? |
scaffold218 |
411361 |
411451 |
+ |
Gypsy-120_SB-I |
LTR/Gypsy |
scaffold218 |
411891 |
411977 |
+ |
RS8799 |
Unspecified |
scaffold218 |
412437 |
412564 |
+ |
RS3283 |
Unspecified |
scaffold218 |
412485 |
412737 |
- |
RS3199 |
Unspecified |
scaffold218 |
412667 |
412896 |
- |
RS2531 |
Unspecified |
scaffold218 |
412777 |
412935 |
+ |
RS8978 |
Unspecified |
scaffold218 |
412961 |
413012 |
+ |
Gypsy-10_Mad-I |
LTR/Gypsy |
scaffold218 |
413048 |
413098 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
413789 |
413853 |
+ |
Gypsy-120_SB-I |
LTR/Gypsy |
scaffold218 |
414144 |
415077 |
- |
RS402 |
Unspecified |
scaffold218 |
416162 |
416218 |
+ |
(ATATTA)n |
Simple_repeat |
scaffold218 |
416634 |
416906 |
+ |
RS846 |
Unspecified |
scaffold218 |
417589 |
417619 |
+ |
(TATTG)n |
Simple_repeat |
scaffold218 |
418030 |
418083 |
+ |
A-rich |
Low_complexity |
scaffold218 |
418126 |
418232 |
+ |
PL24 |
Unspecified |
scaffold218 |
418808 |
418839 |
+ |
(GTT)n |
Simple_repeat |
scaffold218 |
419445 |
419461 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
420399 |
420824 |
- |
RS9496 |
Unspecified |
scaffold218 |
421233 |
421278 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
421870 |
421929 |
+ |
A-rich |
Low_complexity |
scaffold218 |
423041 |
423084 |
+ |
(TGAAT)n |
Simple_repeat |
scaffold218 |
425185 |
425209 |
+ |
(TTGTT)n |
Simple_repeat |
scaffold218 |
426110 |
426284 |
+ |
(AACTG)n |
Simple_repeat |
scaffold218 |
430439 |
430694 |
- |
RS1 |
Unspecified |
scaffold218 |
431621 |
432011 |
- |
RS29 |
Unspecified |
scaffold218 |
432502 |
432527 |
+ |
(AATAA)n |
Simple_repeat |
scaffold218 |
433718 |
433820 |
+ |
RS15482 |
Unspecified |
scaffold218 |
433912 |
433952 |
+ |
A-rich |
Low_complexity |
scaffold218 |
434007 |
434049 |
+ |
GA-rich |
Low_complexity |
scaffold218 |
434055 |
434438 |
- |
RS11855 |
Unspecified |
scaffold218 |
434730 |
434754 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
435971 |
436041 |
- |
PL169 |
Unspecified |
scaffold218 |
436116 |
436157 |
+ |
A-rich |
Low_complexity |
scaffold218 |
439363 |
439442 |
+ |
PL289 |
Unspecified |
scaffold218 |
439366 |
439456 |
+ |
PL296 |
Unspecified |
scaffold218 |
439946 |
440035 |
+ |
A-rich |
Low_complexity |
scaffold218 |
439946 |
440403 |
+ |
A-rich |
Low_complexity |
scaffold218 |
440022 |
440403 |
- |
RS11855 |
Unspecified |
scaffold218 |
440828 |
441006 |
- |
RS1194 |
Unspecified |
scaffold218 |
442433 |
442461 |
+ |
(TTAT)n |
Simple_repeat |
scaffold218 |
443461 |
443478 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
443533 |
444448 |
+ |
RS355 |
Unspecified |
scaffold218 |
444447 |
444696 |
- |
RS4 |
Unspecified |
scaffold218 |
444698 |
444990 |
+ |
RS355 |
Unspecified |
scaffold218 |
445148 |
445171 |
+ |
(AAAT)n |
Simple_repeat |
scaffold218 |
445310 |
445477 |
+ |
RS275 |
Unspecified |
scaffold218 |
445616 |
445656 |
+ |
(AT)n |
Simple_repeat |
scaffold218 |
446162 |
446574 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
446162 |
446198 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
446192 |
446574 |
- |
RS11855 |
Unspecified |
scaffold218 |
446799 |
447035 |
+ |
RS4 |
Unspecified |
scaffold218 |
447579 |
447796 |
- |
RS2493 |
Unspecified |
scaffold218 |
448816 |
449224 |
+ |
A-rich |
Low_complexity |
scaffold218 |
448816 |
448855 |
+ |
A-rich |
Low_complexity |
scaffold218 |
448842 |
449224 |
- |
RS11855 |
Unspecified |
scaffold218 |
449452 |
449481 |
+ |
(TTGAA)n |
Simple_repeat |
scaffold218 |
449650 |
449893 |
+ |
RS4 |
Unspecified |
scaffold218 |
450442 |
450665 |
- |
RS2493 |
Unspecified |
scaffold218 |
451482 |
451527 |
+ |
(ATTT)n |
Simple_repeat |
scaffold218 |
451821 |
451914 |
+ |
RS4475 |
Unspecified |
scaffold218 |
452401 |
452428 |
+ |
(CAAAT)n |
Simple_repeat |
scaffold218 |
452525 |
452542 |
+ |
(AT)n |
Simple_repeat |
scaffold218 |
453230 |
453273 |
+ |
A-rich |
Low_complexity |
scaffold218 |
453400 |
453499 |
+ |
RS18078 |
Unspecified |
scaffold218 |
453693 |
453742 |
- |
RS14970 |
Unspecified |
scaffold218 |
453700 |
453793 |
+ |
RS16382 |
Unspecified |
scaffold218 |
453868 |
453963 |
- |
RS13929 |
Unspecified |
scaffold218 |
454069 |
454123 |
+ |
(TT)n |
Simple_repeat |
scaffold218 |
454402 |
454462 |
+ |
Helitron1_PPa |
RC/Helitron |
scaffold218 |
454890 |
454973 |
+ |
RS727 |
Unspecified |
scaffold218 |
454914 |
454990 |
+ |
RS727 |
Unspecified |
scaffold218 |
454914 |
454974 |
- |
RS18111 |
Unspecified |
scaffold218 |
455008 |
455243 |
- |
RS4 |
Unspecified |
scaffold218 |
455244 |
455263 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
455460 |
455477 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
455558 |
455583 |
+ |
(TCAAA)n |
Simple_repeat |
scaffold218 |
455620 |
455667 |
+ |
A-rich |
Low_complexity |
scaffold218 |
456035 |
456056 |
+ |
(ACA)n |
Simple_repeat |
scaffold218 |
458318 |
458365 |
+ |
(AACAATA)n |
Simple_repeat |
scaffold218 |
458693 |
458718 |
+ |
(CA)n |
Simple_repeat |
scaffold218 |
459723 |
459759 |
+ |
(AAATA)n |
Simple_repeat |
scaffold218 |
460370 |
460497 |
+ |
(AAC)n |
Simple_repeat |
scaffold218 |
461126 |
461158 |
+ |
(TAAA)n |
Simple_repeat |
scaffold218 |
461242 |
461398 |
- |
TRAMET1 |
DNA/TcMar-Stowaway |
scaffold218 |
461516 |
461546 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
464694 |
464738 |
+ |
(GATAC)n |
Simple_repeat |
scaffold218 |
465304 |
465328 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
466518 |
466557 |
+ |
(TTTTTGA)n |
Simple_repeat |
scaffold218 |
467031 |
467185 |
+ |
(TAAC)n |
Simple_repeat |
scaffold218 |
467156 |
467185 |
+ |
(TAAC)n |
Simple_repeat |
scaffold218 |
468852 |
468928 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
468852 |
469069 |
+ |
(T)n |
Simple_repeat |
scaffold218 |
468907 |
469069 |
+ |
RS22 |
Unspecified |
scaffold218 |
469038 |
469074 |
- |
RS5709 |
Unspecified |
scaffold218 |
469696 |
469765 |
+ |
(GAGCTGAACT)n |
Simple_repeat |
scaffold218 |
469780 |
469814 |
+ |
A-rich |
Low_complexity |
scaffold218 |
469828 |
469896 |
+ |
(TGAACTGAAC)n |
Simple_repeat |
scaffold218 |
471428 |
471520 |
+ |
cacta |
cacta(TransposonPSI) |
scaffold218 |
471757 |
471807 |
+ |
(TGGTTC)n |
Simple_repeat |
scaffold218 |
472148 |
472203 |
+ |
A-rich |
Low_complexity |
scaffold218 |
478927 |
478962 |
+ |
(CTTCT)n |
Simple_repeat |
scaffold218 |
480458 |
480609 |
+ |
A-rich |
Low_complexity |
scaffold218 |
480624 |
480670 |
+ |
(AATT)n |
Simple_repeat |
scaffold218 |
480892 |
480942 |
+ |
(ATTTTA)n |
Simple_repeat |
scaffold218 |
482009 |
482050 |
+ |
(AAT)n |
Simple_repeat |
scaffold218 |
482267 |
482296 |
+ |
(TTTA)n |
Simple_repeat |
scaffold218 |
483170 |
483266 |
+ |
(TCTGAAGTTA)n |
Simple_repeat |
scaffold218 |
483285 |
483406 |
+ |
(ATT)n |
Simple_repeat |
scaffold218 |
483408 |
483444 |
+ |
(GTAATT)n |
Simple_repeat |
scaffold218 |
483620 |
483713 |
+ |
(AAT)n |
Simple_repeat |
scaffold218 |
483835 |
483963 |
+ |
(TTA)n |
Simple_repeat |
scaffold218 |
483835 |
483996 |
+ |
(TTA)n |
Simple_repeat |
scaffold218 |
483935 |
484056 |
+ |
(TCTGAAGTTA)n |
Simple_repeat |
scaffold218 |
483981 |
484056 |
+ |
(TCTGAAGTTA)n |
Simple_repeat |
scaffold218 |
483981 |
484101 |
+ |
(TCTGAAGTTA)n |
Simple_repeat |
scaffold218 |
484031 |
484101 |
- |
RS5732 |
Unspecified |
scaffold218 |
484471 |
484506 |
+ |
(ACTTTAA)n |
Simple_repeat |
scaffold218 |
484842 |
484935 |
+ |
RS18358 |
Unspecified |
scaffold218 |
485360 |
485555 |
- |
Copia-3_PTri-I |
LTR/Copia |
scaffold218 |
485556 |
485630 |
- |
Copia-3_PTri-I |
LTR/Copia |
scaffold218 |
486403 |
486453 |
+ |
(ATTTT)n |
Simple_repeat |
scaffold218 |
486582 |
486614 |
+ |
(TAATTTT)n |
Simple_repeat |
scaffold218 |
490790 |
490891 |
- |
RS18111 |
Unspecified |
scaffold218 |
490891 |
490969 |
- |
RS18111 |
Unspecified |
scaffold218 |
492364 |
492419 |
+ |
(AT)n |
Simple_repeat |
scaffold218 |
494036 |
494115 |
+ |
(AACTG)n |
Simple_repeat |
scaffold218 |
497091 |
497147 |
+ |
(ATGG)n |
Simple_repeat |
scaffold218 |
499034 |
499101 |
+ |
GA-rich |
Low_complexity |
scaffold218 |
499255 |
499293 |
+ |
(CCTTC)n |
Simple_repeat |
scaffold218 |
505510 |
505556 |
+ |
GA-rich |
Low_complexity |
scaffold218 |
505652 |
505680 |
+ |
(CAT)n |
Simple_repeat |
scaffold218 |
506189 |
506440 |
+ |
(AACTG)n |
Simple_repeat |
scaffold218 |
507494 |
507632 |
+ |
(TCGGG)n |
Simple_repeat |
scaffold218 |
509944 |
510019 |
+ |
(AACATCA)n |
Simple_repeat |
scaffold218 |
513063 |
513121 |
+ |
A-rich |
Low_complexity |
scaffold218 |
513383 |
513510 |
+ |
RS377 |
Unspecified |
scaffold218 |
513563 |
513588 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
513715 |
513847 |
- |
RS4384 |
Unspecified |
scaffold218 |
515903 |
516199 |
+ |
RS8789 |
Unspecified |
scaffold218 |
515936 |
516312 |
+ |
RS468 |
Unspecified |
scaffold218 |
516342 |
516366 |
+ |
(TAAAA)n |
Simple_repeat |
scaffold218 |
516893 |
516923 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
517012 |
517152 |
+ |
RS191 |
Unspecified |
scaffold218 |
517341 |
517372 |
+ |
(ACA)n |
Simple_repeat |
scaffold218 |
517843 |
517894 |
+ |
(AGGTGG)n |
Simple_repeat |
scaffold218 |
518804 |
519046 |
+ |
RS26 |
Unspecified |
scaffold218 |
519089 |
519385 |
- |
RS1178 |
Unspecified |
scaffold218 |
519665 |
519703 |
+ |
(TGAAT)n |
Simple_repeat |
scaffold218 |
519946 |
520276 |
+ |
RS1178 |
Unspecified |
scaffold218 |
520562 |
520583 |
+ |
(TAG)n |
Simple_repeat |
scaffold218 |
520586 |
520682 |
- |
RS96 |
Unspecified |
scaffold218 |
520683 |
520756 |
+ |
(AGTTC)n |
Simple_repeat |
scaffold218 |
521098 |
521273 |
- |
RS371 |
Unspecified |
scaffold218 |
521330 |
521624 |
+ |
RS13562 |
Unspecified |
scaffold218 |
522015 |
522041 |
+ |
(AATT)n |
Simple_repeat |
scaffold218 |
522226 |
522255 |
+ |
(TTG)n |
Simple_repeat |
scaffold218 |
522841 |
522876 |
+ |
(ACC)n |
Simple_repeat |
scaffold218 |
522974 |
523091 |
+ |
(GTG)n |
Simple_repeat |
scaffold218 |
523064 |
523108 |
+ |
(GGTGGA)n |
Simple_repeat |
scaffold218 |
523109 |
523155 |
+ |
GA-rich |
Low_complexity |
scaffold218 |
523209 |
523271 |
+ |
A-rich |
Low_complexity |
scaffold218 |
523272 |
523308 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
523512 |
523607 |
- |
RS1323 |
Unspecified |
scaffold218 |
523529 |
523621 |
- |
RS1323 |
Unspecified |
scaffold218 |
523546 |
523680 |
- |
RS1323 |
Unspecified |
scaffold218 |
523553 |
523648 |
- |
RS14066 |
Unspecified |
scaffold218 |
523691 |
523792 |
- |
RS14066 |
Unspecified |
scaffold218 |
523808 |
523852 |
+ |
(TATCTA)n |
Simple_repeat |
scaffold218 |
524182 |
524363 |
+ |
BvL1 |
LINE/L1 |
scaffold218 |
524765 |
524957 |
+ |
BvL1-2 |
LINE/L1 |
scaffold218 |
527061 |
527110 |
+ |
(A)n |
Simple_repeat |
scaffold218 |
527739 |
527771 |
+ |
(GGT)n |
Simple_repeat |