scaffold22269 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold22269 |
712 |
794 |
+ |
(GTAGGA)n |
Simple_repeat |
| scaffold22269 |
1190 |
2055 |
- |
Gypsy-38_Mad-I |
LTR/Gypsy |
| scaffold22269 |
1581 |
2227 |
- |
RS1315 |
Unspecified |
| scaffold22269 |
3897 |
3993 |
+ |
(TGA)n |
Simple_repeat |
| scaffold22269 |
4051 |
4089 |
+ |
(T)n |
Simple_repeat |
| scaffold22269 |
4151 |
4367 |
- |
RS128 |
Unspecified |
| scaffold22269 |
4385 |
4761 |
+ |
RS94 |
Unspecified |
| scaffold22269 |
4762 |
4807 |
+ |
(TAT)n |
Simple_repeat |
| scaffold22269 |
4875 |
5102 |
+ |
RS874 |
Unspecified |
| scaffold22269 |
5148 |
5219 |
+ |
Gypsy-2_Pru-I |
LTR/Gypsy |
| scaffold22269 |
6434 |
6490 |
+ |
Alfare1_I-int |
LTR/Copia? |
| scaffold22269 |
6491 |
6528 |
+ |
Gypsy-2_Pru-I |
LTR/Gypsy |
| scaffold22269 |
6537 |
6609 |
+ |
(ATTTTAT)n |
Simple_repeat |
| scaffold22269 |
8238 |
8995 |
+ |
RS246 |
Unspecified |
| scaffold22269 |
8325 |
9075 |
+ |
RS695 |
Unspecified |
| scaffold22269 |
8408 |
9008 |
- |
PL150 |
Unspecified |
| scaffold22269 |
9613 |
9939 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold22269 |
10128 |
10616 |
- |
PL945 |
Unspecified |
| scaffold22269 |
10814 |
11338 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold22269 |
11319 |
11555 |
- |
RS1819 |
Unspecified |
| scaffold22269 |
12001 |
12563 |
+ |
RS808 |
Unspecified |
| scaffold22269 |
12092 |
12665 |
+ |
RS11634 |
Unspecified |
| scaffold22269 |
12764 |
12805 |
+ |
(CAA)n |
Simple_repeat |
| scaffold22269 |
12834 |
12863 |
+ |
(CAC)n |
Simple_repeat |
| scaffold22269 |
12872 |
13062 |
- |
RS8669 |
Unspecified |
| scaffold22269 |
13083 |
13947 |
+ |
A-rich |
Low_complexity |
| scaffold22269 |
13083 |
13115 |
+ |
A-rich |
Low_complexity |
| scaffold22269 |
13107 |
13947 |
+ |
RS1551 |
Unspecified |
| scaffold22269 |
13862 |
14433 |
+ |
RS14147 |
Unspecified |
| scaffold22269 |
14446 |
14480 |
+ |
(ACT)n |
Simple_repeat |
| scaffold22269 |
14520 |
14828 |
+ |
RS9834 |
Unspecified |
| scaffold22269 |
14835 |
15924 |
+ |
(T)n |
Simple_repeat |
| scaffold22269 |
14835 |
14863 |
+ |
(T)n |
Simple_repeat |
| scaffold22269 |
14850 |
15924 |
+ |
RS6048 |
Unspecified |
| scaffold22269 |
15148 |
16066 |
+ |
RS6390 |
Unspecified |
| scaffold22269 |
15996 |
16311 |
- |
RS7159 |
Unspecified |
| scaffold22269 |
16384 |
17644 |
+ |
RS808 |
Unspecified |
| scaffold22269 |
17173 |
17746 |
+ |
RS11634 |
Unspecified |
| scaffold22269 |
17842 |
17889 |
+ |
(CAA)n |
Simple_repeat |
| scaffold22269 |
17918 |
17947 |
+ |
(CAC)n |
Simple_repeat |
| scaffold22269 |
17956 |
18146 |
- |
RS8669 |
Unspecified |
| scaffold22269 |
18167 |
18199 |
+ |
A-rich |
Low_complexity |
| scaffold22269 |
18167 |
19031 |
+ |
A-rich |
Low_complexity |
| scaffold22269 |
18191 |
19031 |
+ |
RS1551 |
Unspecified |
| scaffold22269 |
18946 |
19121 |
+ |
RS14147 |
Unspecified |
| scaffold22269 |
19262 |
19349 |
+ |
Gypsy-14_ST-I |
LTR/Gypsy |
| scaffold22269 |
19715 |
19755 |
+ |
Gypsy19-VV_I-int |
LTR/Gypsy |
| scaffold22269 |
20317 |
20357 |
+ |
(GAAAA)n |
Simple_repeat |
| scaffold22269 |
20603 |
20644 |
+ |
WHAM2_TM-int |
LTR/Gypsy |
| scaffold22269 |
21290 |
21912 |
+ |
PL219 |
Unspecified |
| scaffold22269 |
22036 |
22095 |
- |
Copia-10_TC-I |
LTR/Copia |
| scaffold22269 |
22069 |
22109 |
- |
TOPIE1_LE_I-int |
LTR/Copia |
| scaffold22269 |
22830 |
22863 |
+ |
(T)n |
Simple_repeat |
| scaffold22269 |
23811 |
24467 |
+ |
RS1203 |
Unspecified |
| scaffold22269 |
24542 |
24605 |
+ |
(TGAT)n |
Simple_repeat |
| scaffold22269 |
25359 |
25415 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold22269 |
25424 |
25924 |
- |
Copia-71_ZM-I |
LTR/Copia |
| scaffold22269 |
26533 |
26554 |
+ |
(ATT)n |
Simple_repeat |
| scaffold22269 |
26554 |
26915 |
+ |
RS1788 |
Unspecified |
| scaffold22269 |
26942 |
26974 |
+ |
(TTTTAT)n |
Simple_repeat |
| scaffold22269 |
27250 |
27692 |
- |
PL153 |
Unspecified |
| scaffold22269 |
27310 |
27734 |
+ |
(TTA)n |
Simple_repeat |
| scaffold22269 |
27692 |
27734 |
+ |
(TTA)n |
Simple_repeat |
| scaffold22269 |
28271 |
29150 |
- |
RS822 |
Unspecified |
| scaffold22269 |
29048 |
29297 |
- |
RS741 |
Unspecified |
| scaffold22269 |
30373 |
30574 |
- |
Gypsy-51_SB-I |
LTR/Gypsy |
| scaffold22269 |
30373 |
30424 |
- |
Gypsy-51_SB-I |
LTR/Gypsy |
| scaffold22269 |
30414 |
30574 |
+ |
RS2535 |
Unspecified |
| scaffold22269 |
30691 |
30791 |
+ |
A-rich |
Low_complexity |
| scaffold22269 |
33080 |
33336 |
- |
RS3406 |
Unspecified |
| scaffold22269 |
33387 |
33952 |
- |
RS2226 |
Unspecified |
| scaffold22269 |
34066 |
34194 |
- |
RS10537 |
Unspecified |
| scaffold22269 |
34450 |
34581 |
+ |
RS6335 |
Unspecified |
| scaffold22269 |
35297 |
36000 |
- |
Mariner_MT |
DNA/TcMar-Stowaway |
| scaffold22269 |
36598 |
36628 |
+ |
(T)n |
Simple_repeat |
| scaffold22269 |
36598 |
36803 |
+ |
(T)n |
Simple_repeat |
| scaffold22269 |
36617 |
36803 |
- |
RS8048 |
Unspecified |
| scaffold22269 |
36863 |
36953 |
+ |
RS8801 |
Unspecified |
| scaffold22269 |
36978 |
37163 |
- |
RS648 |
Unspecified |
| scaffold22269 |
37052 |
38707 |
- |
ATCopia28_I-int |
LTR/Copia |
| scaffold22269 |
37146 |
38707 |
- |
ATCopia28_I-int |
LTR/Copia |
| scaffold22269 |
38700 |
39007 |
- |
Copia-85_ST-I |
LTR/Copia |
| scaffold22269 |
39159 |
39196 |
+ |
(TAT)n |
Simple_repeat |
| scaffold22269 |
39321 |
39348 |
+ |
(T)n |
Simple_repeat |
| scaffold22269 |
39513 |
39621 |
+ |
(ATAAT)n |
Simple_repeat |
| scaffold22269 |
41556 |
41593 |
+ |
A-rich |
Low_complexity |
| scaffold22269 |
44164 |
45786 |
- |
L1-16_Mad |
LINE/L1 |
| scaffold22269 |
46631 |
46790 |
- |
RS648 |
Unspecified |
| scaffold22269 |
47813 |
48625 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold22269 |
49072 |
49560 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold22269 |
50656 |
50907 |
- |
RS311 |
Unspecified |
| scaffold22269 |
50901 |
51246 |
+ |
(TTA)n |
Simple_repeat |
| scaffold22269 |
50901 |
51144 |
+ |
(TTA)n |
Simple_repeat |
| scaffold22269 |
51077 |
51246 |
- |
RS1323 |
Unspecified |
| scaffold22269 |
52750 |
53460 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold22269 |
54732 |
54822 |
+ |
(GAT)n |
Simple_repeat |
| scaffold22269 |
54819 |
54883 |
+ |
A-rich |
Low_complexity |
| scaffold22269 |
54938 |
54989 |
+ |
(TAT)n |
Simple_repeat |
| scaffold22269 |
55098 |
55124 |
+ |
(TTA)n |
Simple_repeat |
| scaffold22269 |
55126 |
55158 |
+ |
(T)n |
Simple_repeat |
| scaffold22269 |
55687 |
57453 |
- |
RS228 |
Unspecified |
| scaffold22269 |
57351 |
57885 |
- |
RS990 |
Unspecified |
| scaffold22269 |
58213 |
58274 |
+ |
(TTATAT)n |
Simple_repeat |
| scaffold22269 |
59206 |
59270 |
+ |
(TTTATCG)n |
Simple_repeat |
| scaffold22269 |
60392 |
60467 |
+ |
OARE1_I-int |
LTR/Copia |
| scaffold22269 |
60462 |
60587 |
+ |
RIRE1_I-int |
LTR/Copia |
| scaffold22269 |
60609 |
61874 |
+ |
RIRE1_I-int |
LTR/Copia |
| scaffold22269 |
61989 |
62661 |
+ |
RIRE1_I-int |
LTR/Copia |