scaffold22863 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold22863 |
39 |
131 |
+ |
A-rich |
Low_complexity |
| scaffold22863 |
1230 |
1301 |
- |
RS4179 |
Unspecified |
| scaffold22863 |
1462 |
1513 |
+ |
(GATATCA)n |
Simple_repeat |
| scaffold22863 |
1582 |
1711 |
- |
RS4179 |
Unspecified |
| scaffold22863 |
1836 |
1915 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold22863 |
1941 |
2055 |
- |
RS4179 |
Unspecified |
| scaffold22863 |
2103 |
2263 |
- |
RS8413 |
Unspecified |
| scaffold22863 |
2964 |
2997 |
+ |
(TA)n |
Simple_repeat |
| scaffold22863 |
3781 |
3934 |
+ |
RS6296 |
Unspecified |
| scaffold22863 |
3994 |
4152 |
+ |
RS4966 |
Unspecified |
| scaffold22863 |
4364 |
4549 |
- |
RS4579 |
Unspecified |
| scaffold22863 |
4436 |
4630 |
+ |
RS1517 |
Unspecified |
| scaffold22863 |
4803 |
4850 |
+ |
(TACAAT)n |
Simple_repeat |
| scaffold22863 |
5061 |
5401 |
- |
RS4966 |
Unspecified |
| scaffold22863 |
5406 |
5545 |
- |
RS6296 |
Unspecified |
| scaffold22863 |
5545 |
5563 |
+ |
(CAA)n |
Simple_repeat |
| scaffold22863 |
5862 |
5883 |
+ |
(A)n |
Simple_repeat |
| scaffold22863 |
6114 |
6138 |
+ |
(TTA)n |
Simple_repeat |
| scaffold22863 |
6262 |
6285 |
+ |
(TA)n |
Simple_repeat |
| scaffold22863 |
6510 |
6541 |
+ |
(TCTTTA)n |
Simple_repeat |
| scaffold22863 |
6716 |
6745 |
+ |
(AT)n |
Simple_repeat |
| scaffold22863 |
6897 |
6919 |
+ |
(CCA)n |
Simple_repeat |
| scaffold22863 |
6920 |
6950 |
+ |
(CTCCAC)n |
Simple_repeat |
| scaffold22863 |
7404 |
7471 |
+ |
(TGG)n |
Simple_repeat |
| scaffold22863 |
8220 |
8358 |
- |
RS17460 |
Unspecified |
| scaffold22863 |
8524 |
9143 |
- |
RS9240 |
Unspecified |
| scaffold22863 |
10098 |
11434 |
+ |
RIRE1_I-int |
LTR/Copia |
| scaffold22863 |
11428 |
11594 |
- |
RS4068 |
Unspecified |
| scaffold22863 |
14357 |
14630 |
+ |
RS279 |
Unspecified |
| scaffold22863 |
14757 |
15012 |
+ |
RS6376 |
Unspecified |
| scaffold22863 |
16900 |
16966 |
+ |
(AC)n |
Simple_repeat |
| scaffold22863 |
16998 |
17309 |
- |
RS6188 |
Unspecified |
| scaffold22863 |
19540 |
19747 |
+ |
RS5324 |
Unspecified |
| scaffold22863 |
19572 |
19767 |
+ |
RS10349 |
Unspecified |
| scaffold22863 |
19859 |
19881 |
+ |
(AT)n |
Simple_repeat |
| scaffold22863 |
21205 |
24504 |
- |
gypsy |
gypsy(TransposonPSI) |
| scaffold22863 |
21208 |
21792 |
- |
Gypsy-6_CP-I |
LTR/Gypsy |
| scaffold22863 |
21998 |
23639 |
- |
Gypsy-6_CP-I |
LTR/Gypsy |
| scaffold22863 |
25086 |
25628 |
+ |
PL423 |
Unspecified |
| scaffold22863 |
25162 |
26655 |
+ |
RS30 |
Unspecified |
| scaffold22863 |
27223 |
27353 |
+ |
(TACTTA)n |
Simple_repeat |
| scaffold22863 |
27354 |
27935 |
+ |
RS6457 |
Unspecified |
| scaffold22863 |
27455 |
28108 |
+ |
RS1154 |
Unspecified |
| scaffold22863 |
28178 |
28215 |
+ |
(ATAAT)n |
Simple_repeat |
| scaffold22863 |
28291 |
28353 |
+ |
(ACACAT)n |
Simple_repeat |
| scaffold22863 |
28481 |
28512 |
+ |
A-rich |
Low_complexity |
| scaffold22863 |
28549 |
28954 |
+ |
PL785 |
Unspecified |
| scaffold22863 |
29391 |
29598 |
+ |
RS5324 |
Unspecified |
| scaffold22863 |
29423 |
29618 |
+ |
RS10349 |
Unspecified |
| scaffold22863 |
29692 |
29737 |
+ |
(AT)n |
Simple_repeat |
| scaffold22863 |
30528 |
31461 |
- |
RS402 |
Unspecified |
| scaffold22863 |
31460 |
31769 |
+ |
RS158 |
Unspecified |
| scaffold22863 |
32779 |
32883 |
+ |
RS118 |
Unspecified |
| scaffold22863 |
33107 |
33204 |
+ |
A-rich |
Low_complexity |
| scaffold22863 |
33650 |
34088 |
- |
PL417 |
Unspecified |
| scaffold22863 |
33650 |
34273 |
+ |
RS1210 |
Unspecified |
| scaffold22863 |
34258 |
34480 |
+ |
PL780 |
Unspecified |
| scaffold22863 |
35003 |
35432 |
+ |
PL780 |
Unspecified |
| scaffold22863 |
35683 |
35927 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold22863 |
36354 |
36690 |
+ |
RS10321 |
Unspecified |
| scaffold22863 |
36785 |
37311 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold22863 |
37298 |
38318 |
- |
RS1819 |
Unspecified |
| scaffold22863 |
37470 |
38431 |
+ |
PL394 |
Unspecified |
| scaffold22863 |
38567 |
38615 |
+ |
(TTGGAATG)n |
Simple_repeat |
| scaffold22863 |
38820 |
38863 |
+ |
A-rich |
Low_complexity |
| scaffold22863 |
39815 |
40117 |
+ |
PL780 |
Unspecified |
| scaffold22863 |
40202 |
40427 |
+ |
PL780 |
Unspecified |
| scaffold22863 |
40971 |
41147 |
+ |
PL100 |
Unspecified |
| scaffold22863 |
41597 |
41787 |
- |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold22863 |
42179 |
42221 |
+ |
(ATATAA)n |
Simple_repeat |
| scaffold22863 |
44235 |
44258 |
+ |
(T)n |
Simple_repeat |
| scaffold22863 |
45008 |
45318 |
+ |
RS277 |
Unspecified |
| scaffold22863 |
46024 |
46168 |
+ |
RS4780 |
Unspecified |
| scaffold22863 |
46198 |
46346 |
+ |
RS12749 |
Unspecified |
| scaffold22863 |
46553 |
47130 |
+ |
Copia-37_GM-I |
LTR/Copia |
| scaffold22863 |
47174 |
47855 |
+ |
Copia-37_GM-I |
LTR/Copia |
| scaffold22863 |
47174 |
47960 |
+ |
Copia-37_GM-I |
LTR/Copia |
| scaffold22863 |
47837 |
47960 |
+ |
RS12856 |
Unspecified |
| scaffold22863 |
49236 |
49350 |
+ |
RS4780 |
Unspecified |
| scaffold22863 |
49356 |
49500 |
- |
RS4780 |
Unspecified |
| scaffold22863 |
49958 |
50741 |
- |
LINE1-57_ZM |
LINE/L1 |
| scaffold22863 |
51564 |
51591 |
+ |
(T)n |
Simple_repeat |
| scaffold22863 |
53674 |
53763 |
+ |
(CCA)n |
Simple_repeat |
| scaffold22863 |
53776 |
53838 |
+ |
A-rich |
Low_complexity |
| scaffold22863 |
54307 |
54554 |
- |
PL93 |
Unspecified |
| scaffold22863 |
54711 |
55041 |
- |
RS748 |
Unspecified |
| scaffold22863 |
55209 |
55330 |
+ |
(AAGTTTTCTG)n |
Simple_repeat |
| scaffold22863 |
55353 |
55438 |
+ |
(ATA)n |
Simple_repeat |
| scaffold22863 |
55353 |
55671 |
+ |
(ATA)n |
Simple_repeat |
| scaffold22863 |
55424 |
55671 |
+ |
PL298 |
Unspecified |
| scaffold22863 |
55693 |
55808 |
+ |
(TCTGAAGTTT)n |
Simple_repeat |
| scaffold22863 |
56596 |
56757 |
- |
RS233 |
Unspecified |
| scaffold22863 |
56615 |
56763 |
+ |
RS2719 |
Unspecified |
| scaffold22863 |
56889 |
57089 |
+ |
RS15121 |
Unspecified |
| scaffold22863 |
57091 |
57122 |
+ |
(T)n |
Simple_repeat |
| scaffold22863 |
57236 |
57270 |
+ |
A-rich |
Low_complexity |
| scaffold22863 |
57477 |
57773 |
- |
RS588 |
Unspecified |
| scaffold22863 |
57945 |
58036 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold22863 |
59815 |
59939 |
+ |
PL198 |
Unspecified |
| scaffold22863 |
59816 |
59992 |
+ |
RS439 |
Unspecified |
| scaffold22863 |
59941 |
60498 |
- |
RS319 |
Unspecified |
| scaffold22863 |
60500 |
60661 |
- |
RS319 |
Unspecified |
| scaffold22863 |
60869 |
60898 |
+ |
A-rich |
Low_complexity |
| scaffold22863 |
61004 |
61049 |
+ |
(GCCACC)n |
Simple_repeat |
| scaffold22863 |
61217 |
61256 |
+ |
(CGTGTC)n |
Simple_repeat |
| scaffold22863 |
61266 |
61647 |
- |
RS319 |
Unspecified |
| scaffold22863 |
61648 |
61946 |
- |
RS319 |
Unspecified |
| scaffold22863 |
61892 |
62041 |
- |
RS1527 |
Unspecified |
| scaffold22863 |
61917 |
62056 |
- |
RS319 |
Unspecified |
| scaffold22863 |
62000 |
62146 |
- |
RS1527 |
Unspecified |
| scaffold22863 |
62030 |
62207 |
- |
RS319 |
Unspecified |
| scaffold22863 |
62152 |
62304 |
- |
RS1527 |
Unspecified |
| scaffold22863 |
62185 |
62319 |
- |
RS319 |
Unspecified |
| scaffold22863 |
62265 |
62340 |
- |
RS1527 |
Unspecified |
| scaffold22863 |
62357 |
62548 |
- |
RS2499 |
Unspecified |
| scaffold22863 |
62816 |
63422 |
+ |
PL142 |
Unspecified |
| scaffold22863 |
65613 |
65914 |
+ |
RS8 |
Unspecified |
| scaffold22863 |
65913 |
66594 |
- |
PL265 |
Unspecified |
| scaffold22863 |
66605 |
66691 |
- |
RS8 |
Unspecified |
| scaffold22863 |
67048 |
67091 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold22863 |
67114 |
67142 |
+ |
(ATCCA)n |
Simple_repeat |
| scaffold22863 |
69279 |
69313 |
+ |
(TGAT)n |
Simple_repeat |
| scaffold22863 |
69426 |
69450 |
+ |
(GTTA)n |
Simple_repeat |