scaffold23113 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold23113 |
115 |
153 |
+ |
(ATAAGC)n |
Simple_repeat |
| scaffold23113 |
814 |
840 |
+ |
(ATAAA)n |
Simple_repeat |
| scaffold23113 |
1123 |
1144 |
+ |
(TAAA)n |
Simple_repeat |
| scaffold23113 |
1588 |
1651 |
- |
MEGY-I_MT |
LTR/Gypsy |
| scaffold23113 |
3961 |
4003 |
+ |
A-rich |
Low_complexity |
| scaffold23113 |
4058 |
4093 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold23113 |
4568 |
4592 |
+ |
(ATGA)n |
Simple_repeat |
| scaffold23113 |
6932 |
6967 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold23113 |
8273 |
8355 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold23113 |
8549 |
8789 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold23113 |
9382 |
10344 |
+ |
gypsy |
gypsy(TransposonPSI) |
| scaffold23113 |
9707 |
10254 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold23113 |
11262 |
11304 |
+ |
Gypsy-10_Mad-I |
LTR/Gypsy |
| scaffold23113 |
11330 |
11719 |
- |
PL755 |
Unspecified |
| scaffold23113 |
11407 |
11719 |
- |
PL491 |
Unspecified |
| scaffold23113 |
12417 |
12452 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold23113 |
13650 |
13892 |
+ |
ATHILA-6_SBi-I |
LTR/Gypsy |
| scaffold23113 |
14874 |
15342 |
+ |
PL812 |
Unspecified |
| scaffold23113 |
15331 |
15550 |
- |
Gypsy16-VV_I-int |
LTR/Gypsy |
| scaffold23113 |
19220 |
19327 |
- |
Gypsy16-VV_I-int |
LTR/Gypsy |
| scaffold23113 |
21308 |
21341 |
+ |
(GAACA)n |
Simple_repeat |
| scaffold23113 |
21882 |
22109 |
- |
gypsy |
gypsy(TransposonPSI) |
| scaffold23113 |
21895 |
21962 |
- |
Gypsy-47_Mad-I |
LTR/Gypsy |
| scaffold23113 |
21960 |
22054 |
- |
Gypsy-18_SB-I |
LTR/Gypsy |
| scaffold23113 |
22135 |
22166 |
+ |
(TCTGG)n |
Simple_repeat |
| scaffold23113 |
22329 |
22429 |
- |
GypsI_I-int |
LTR/Gypsy |
| scaffold23113 |
24402 |
24894 |
- |
PL743 |
Unspecified |
| scaffold23113 |
24947 |
25237 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold23113 |
25249 |
25465 |
+ |
(AAC)n |
Simple_repeat |
| scaffold23113 |
25296 |
25465 |
+ |
(AAC)n |
Simple_repeat |
| scaffold23113 |
25521 |
25587 |
+ |
(AAC)n |
Simple_repeat |
| scaffold23113 |
25842 |
25878 |
+ |
(A)n |
Simple_repeat |
| scaffold23113 |
26011 |
26063 |
+ |
(TAA)n |
Simple_repeat |
| scaffold23113 |
26609 |
26634 |
+ |
(T)n |
Simple_repeat |
| scaffold23113 |
26711 |
26727 |
+ |
(T)n |
Simple_repeat |
| scaffold23113 |
27417 |
27567 |
- |
SZ-25_LTR |
LTR/Copia |
| scaffold23113 |
28339 |
28390 |
+ |
(CTTTTT)n |
Simple_repeat |
| scaffold23113 |
29075 |
29149 |
+ |
(TGCTT)n |
Simple_repeat |
| scaffold23113 |
29244 |
29305 |
+ |
COPI2_I-int |
LTR/Copia |
| scaffold23113 |
29322 |
29375 |
+ |
(GAGGAT)n |
Simple_repeat |
| scaffold23113 |
30846 |
30888 |
+ |
(TATGT)n |
Simple_repeat |
| scaffold23113 |
31605 |
32428 |
- |
Gypsy3-VV_I-int |
LTR/Gypsy |
| scaffold23113 |
32990 |
34337 |
- |
Gypsy-38_Mad-I |
LTR/Gypsy |
| scaffold23113 |
36775 |
36884 |
- |
SZ-25_LTR |
LTR/Copia |
| scaffold23113 |
37546 |
37574 |
+ |
A-rich |
Low_complexity |
| scaffold23113 |
37885 |
37933 |
+ |
A-rich |
Low_complexity |
| scaffold23113 |
37999 |
38769 |
- |
RS266 |
Unspecified |
| scaffold23113 |
38855 |
38903 |
+ |
(AATTA)n |
Simple_repeat |
| scaffold23113 |
41517 |
41780 |
- |
RS356 |
Unspecified |
| scaffold23113 |
42639 |
42982 |
+ |
RS504 |
Unspecified |
| scaffold23113 |
42639 |
43023 |
- |
PL464 |
Unspecified |
| scaffold23113 |
43175 |
43239 |
+ |
(A)n |
Simple_repeat |
| scaffold23113 |
43587 |
43743 |
+ |
PL6 |
Unspecified |
| scaffold23113 |
44606 |
44635 |
+ |
(TA)n |
Simple_repeat |
| scaffold23113 |
44771 |
44833 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold23113 |
45051 |
45110 |
+ |
(A)n |
Simple_repeat |
| scaffold23113 |
45550 |
45576 |
+ |
(T)n |
Simple_repeat |
| scaffold23113 |
47319 |
47377 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold23113 |
47445 |
47475 |
+ |
(T)n |
Simple_repeat |
| scaffold23113 |
47668 |
48610 |
- |
PL445 |
Unspecified |
| scaffold23113 |
48154 |
48861 |
- |
RS514 |
Unspecified |
| scaffold23113 |
48196 |
48733 |
- |
RS3091 |
Unspecified |
| scaffold23113 |
48739 |
49023 |
+ |
RS266 |
Unspecified |
| scaffold23113 |
49854 |
49904 |
+ |
(TTATAA)n |
Simple_repeat |
| scaffold23113 |
51355 |
51386 |
+ |
(TTGATT)n |
Simple_repeat |
| scaffold23113 |
55639 |
55762 |
+ |
RS69 |
Unspecified |
| scaffold23113 |
55892 |
55948 |
+ |
(AAT)n |
Simple_repeat |
| scaffold23113 |
56119 |
56609 |
- |
PL472 |
Unspecified |
| scaffold23113 |
56675 |
56753 |
+ |
(TAATTAG)n |
Simple_repeat |
| scaffold23113 |
57167 |
57313 |
- |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold23113 |
57532 |
57600 |
+ |
A-rich |
Low_complexity |
| scaffold23113 |
59694 |
59755 |
+ |
A-rich |
Low_complexity |
| scaffold23113 |
60254 |
60333 |
+ |
A-rich |
Low_complexity |
| scaffold23113 |
60623 |
60678 |
+ |
RETROSAT5_I-int |
LTR/Gypsy |
| scaffold23113 |
61850 |
62009 |
- |
EnSpm-1_STu |
DNA/CMC-EnSpm |
| scaffold23113 |
62158 |
63223 |
- |
LINE1I_MT |
LINE/L1 |
| scaffold23113 |
63331 |
63500 |
+ |
RS75 |
Unspecified |
| scaffold23113 |
64231 |
64257 |
+ |
(ATTC)n |
Simple_repeat |
| scaffold23113 |
64545 |
64785 |
+ |
RS387 |
Unspecified |
| scaffold23113 |
64787 |
66465 |
+ |
RS254 |
Unspecified |
| scaffold23113 |
66513 |
66837 |
+ |
RS52 |
Unspecified |
| scaffold23113 |
67021 |
67168 |
- |
RS3462 |
Unspecified |