scaffold23813 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold23813 |
1 |
95 |
- |
RS158 |
Unspecified |
| scaffold23813 |
1284 |
1340 |
+ |
A-rich |
Low_complexity |
| scaffold23813 |
1665 |
1781 |
+ |
LTR-1_SBi-LTR |
LTR |
| scaffold23813 |
1724 |
1742 |
+ |
(ACA)n |
Simple_repeat |
| scaffold23813 |
1774 |
2786 |
+ |
RS2043 |
Unspecified |
| scaffold23813 |
5784 |
7832 |
+ |
RS387 |
Unspecified |
| scaffold23813 |
7833 |
9024 |
- |
PL568 |
Unspecified |
| scaffold23813 |
9027 |
9452 |
- |
RS488 |
Unspecified |
| scaffold23813 |
9501 |
9542 |
+ |
Gypsy-73_PTr-LTR |
LTR/Gypsy |
| scaffold23813 |
10119 |
10181 |
+ |
A-rich |
Low_complexity |
| scaffold23813 |
10770 |
11309 |
- |
RS984 |
Unspecified |
| scaffold23813 |
12097 |
12326 |
+ |
RS549 |
Unspecified |
| scaffold23813 |
12928 |
13145 |
+ |
RS897 |
Unspecified |
| scaffold23813 |
13235 |
13277 |
+ |
(A)n |
Simple_repeat |
| scaffold23813 |
14241 |
14270 |
+ |
A-rich |
Low_complexity |
| scaffold23813 |
14625 |
14867 |
- |
RS3121 |
Unspecified |
| scaffold23813 |
15537 |
15562 |
+ |
(TAT)n |
Simple_repeat |
| scaffold23813 |
16187 |
16218 |
+ |
(A)n |
Simple_repeat |
| scaffold23813 |
20372 |
20489 |
+ |
COPMET_LTR |
LTR/Copia |
| scaffold23813 |
21862 |
21886 |
+ |
(GTT)n |
Simple_repeat |
| scaffold23813 |
22395 |
22434 |
+ |
A-rich |
Low_complexity |
| scaffold23813 |
22482 |
22550 |
+ |
A-rich |
Low_complexity |
| scaffold23813 |
23500 |
23807 |
+ |
LINE1-30_ZM |
LINE/L1 |
| scaffold23813 |
24961 |
25337 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold23813 |
25432 |
25444 |
+ |
A-rich |
Low_complexity |
| scaffold23813 |
25445 |
25477 |
+ |
(AGTAAA)n |
Simple_repeat |
| scaffold23813 |
26061 |
26302 |
- |
RS3707 |
Unspecified |
| scaffold23813 |
26447 |
26473 |
+ |
(TTC)n |
Simple_repeat |
| scaffold23813 |
26566 |
26585 |
- |
TORTL1 |
LTR/Copia |
| scaffold23813 |
26586 |
26616 |
- |
TND1_I-int |
LTR/Copia |
| scaffold23813 |
27362 |
27533 |
+ |
PL248 |
Unspecified |
| scaffold23813 |
27536 |
27674 |
- |
RS4060 |
Unspecified |
| scaffold23813 |
27670 |
28206 |
+ |
RS2172 |
Unspecified |
| scaffold23813 |
28270 |
28316 |
+ |
(GTGCTTTG)n |
Simple_repeat |
| scaffold23813 |
28716 |
29013 |
- |
RS7860 |
Unspecified |
| scaffold23813 |
29439 |
29590 |
- |
RS9659 |
Unspecified |
| scaffold23813 |
29788 |
29819 |
+ |
(ATAGTG)n |
Simple_repeat |
| scaffold23813 |
31034 |
31216 |
- |
RS18243 |
Unspecified |
| scaffold23813 |
31491 |
31507 |
+ |
(T)n |
Simple_repeat |
| scaffold23813 |
35845 |
35990 |
- |
RS9501 |
Unspecified |
| scaffold23813 |
36929 |
37048 |
- |
RS8532 |
Unspecified |
| scaffold23813 |
37124 |
37352 |
- |
RS1602 |
Unspecified |
| scaffold23813 |
37191 |
37373 |
+ |
RS3862 |
Unspecified |
| scaffold23813 |
38845 |
38882 |
+ |
A-rich |
Low_complexity |
| scaffold23813 |
39020 |
39068 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold23813 |
39583 |
39642 |
+ |
A-rich |
Low_complexity |
| scaffold23813 |
40454 |
40473 |
+ |
(CAA)n |
Simple_repeat |
| scaffold23813 |
40504 |
40554 |
+ |
(TTTTGTG)n |
Simple_repeat |
| scaffold23813 |
41291 |
41333 |
+ |
A-rich |
Low_complexity |
| scaffold23813 |
41490 |
42257 |
+ |
PL166 |
Unspecified |
| scaffold23813 |
42373 |
42409 |
+ |
(ATA)n |
Simple_repeat |
| scaffold23813 |
42618 |
43109 |
- |
PL243 |
Unspecified |
| scaffold23813 |
42670 |
43272 |
+ |
PL936 |
Unspecified |
| scaffold23813 |
42848 |
43629 |
- |
RS1154 |
Unspecified |
| scaffold23813 |
43153 |
43701 |
- |
RS6457 |
Unspecified |
| scaffold23813 |
43708 |
43851 |
+ |
(ATTTTAGAT)n |
Simple_repeat |
| scaffold23813 |
43863 |
43939 |
+ |
(TGAATAA)n |
Simple_repeat |
| scaffold23813 |
44585 |
45250 |
- |
RS30 |
Unspecified |
| scaffold23813 |
45333 |
45398 |
+ |
(CAT)n |
Simple_repeat |
| scaffold23813 |
45583 |
46209 |
- |
Gypsy1-PTR_I-int |
LTR/Gypsy |
| scaffold23813 |
46300 |
46850 |
+ |
RS1930 |
Unspecified |
| scaffold23813 |
46860 |
46911 |
+ |
(GTT)n |
Simple_repeat |
| scaffold23813 |
47367 |
47543 |
- |
PIGY-LTR_PS |
LTR/Gypsy |
| scaffold23813 |
48119 |
48166 |
+ |
A-rich |
Low_complexity |
| scaffold23813 |
48818 |
48866 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold23813 |
49385 |
49444 |
+ |
A-rich |
Low_complexity |
| scaffold23813 |
49731 |
49994 |
+ |
RS3735 |
Unspecified |
| scaffold23813 |
49852 |
50075 |
+ |
RS6679 |
Unspecified |
| scaffold23813 |
50250 |
51837 |
- |
Copia-38_ST-I |
LTR/Copia |
| scaffold23813 |
52255 |
53697 |
- |
GmCOPIA10_I-int |
LTR/Copia |
| scaffold23813 |
54358 |
55602 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold23813 |
55106 |
55226 |
- |
COPIA-I_MT |
LTR/Copia |
| scaffold23813 |
55256 |
55368 |
- |
TORTL1 |
LTR/Copia |
| scaffold23813 |
55622 |
55773 |
+ |
(AGCTG)n |
Simple_repeat |
| scaffold23813 |
55794 |
55968 |
+ |
(CAA)n |
Simple_repeat |
| scaffold23813 |
55972 |
56703 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold23813 |
55987 |
56874 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold23813 |
56273 |
56602 |
- |
COPIA-I_MT |
LTR/Copia |
| scaffold23813 |
56897 |
56945 |
+ |
A-rich |
Low_complexity |
| scaffold23813 |
57001 |
57119 |
+ |
RS1068 |
Unspecified |
| scaffold23813 |
57686 |
58030 |
+ |
RS971 |
Unspecified |
| scaffold23813 |
57925 |
58051 |
+ |
RS4595 |
Unspecified |
| scaffold23813 |
59077 |
59153 |
+ |
(AATTT)n |
Simple_repeat |
| scaffold23813 |
59194 |
59376 |
+ |
RS3756 |
Unspecified |
| scaffold23813 |
60238 |
60290 |
+ |
(TTATAT)n |
Simple_repeat |
| scaffold23813 |
61452 |
61480 |
+ |
(A)n |
Simple_repeat |
| scaffold23813 |
62077 |
62252 |
- |
RS1874 |
Unspecified |
| scaffold23813 |
62299 |
62395 |
- |
RS79 |
Unspecified |
| scaffold23813 |
62313 |
62419 |
- |
RS3756 |
Unspecified |
| scaffold23813 |
62396 |
62552 |
- |
RS79 |
Unspecified |
| scaffold23813 |
63596 |
63640 |
+ |
(TGGA)n |
Simple_repeat |
| scaffold23813 |
63651 |
63959 |
+ |
PL22 |
Unspecified |
| scaffold23813 |
64018 |
64064 |
+ |
RS727 |
Unspecified |
| scaffold23813 |
64705 |
64889 |
- |
RS3756 |
Unspecified |
| scaffold23813 |
64962 |
64992 |
+ |
(AAAAT)n |
Simple_repeat |
| scaffold23813 |
65207 |
65477 |
+ |
RS356 |
Unspecified |
| scaffold23813 |
66391 |
66571 |
- |
RS38 |
Unspecified |
| scaffold23813 |
67143 |
67165 |
+ |
(A)n |
Simple_repeat |
| scaffold23813 |
67600 |
67640 |
+ |
A-rich |
Low_complexity |
| scaffold23813 |
69225 |
69267 |
+ |
GA-rich |
Low_complexity |
| scaffold23813 |
69396 |
69449 |
+ |
(ATTTA)n |
Simple_repeat |
| scaffold23813 |
69633 |
69655 |
+ |
(A)n |
Simple_repeat |
| scaffold23813 |
69767 |
69793 |
+ |
(T)n |
Simple_repeat |
| scaffold23813 |
69941 |
69972 |
+ |
(TA)n |
Simple_repeat |
| scaffold23813 |
69974 |
70008 |
+ |
GA-rich |
Low_complexity |
| scaffold23813 |
70196 |
70230 |
+ |
(TTCT)n |
Simple_repeat |
| scaffold23813 |
70284 |
70699 |
+ |
PL3 |
Unspecified |