scaffold2401 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold2401 |
1 |
363 |
- |
PL376 |
Unspecified |
| scaffold2401 |
506 |
562 |
+ |
A-rich |
Low_complexity |
| scaffold2401 |
933 |
1242 |
+ |
RS1529 |
Unspecified |
| scaffold2401 |
1308 |
1363 |
+ |
RS776 |
Unspecified |
| scaffold2401 |
1363 |
1617 |
- |
RS6498 |
Unspecified |
| scaffold2401 |
2511 |
4235 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold2401 |
2682 |
2774 |
- |
L1-15_GM |
LINE/L1 |
| scaffold2401 |
2815 |
3476 |
- |
ATLINEIII |
LINE/L1 |
| scaffold2401 |
5152 |
5214 |
- |
L1-15_GM |
LINE/L1 |
| scaffold2401 |
5254 |
5298 |
+ |
(CAGCAA)n |
Simple_repeat |
| scaffold2401 |
6185 |
6440 |
+ |
RS776 |
Unspecified |
| scaffold2401 |
6281 |
6462 |
+ |
PL477 |
Unspecified |
| scaffold2401 |
6557 |
6997 |
- |
RS4002 |
Unspecified |
| scaffold2401 |
7641 |
7681 |
+ |
TOPIE1_LE_I-int |
LTR/Copia |
| scaffold2401 |
7652 |
8227 |
+ |
TND1_I-int |
LTR/Copia |
| scaffold2401 |
7652 |
7685 |
+ |
TND1_I-int |
LTR/Copia |
| scaffold2401 |
7681 |
8227 |
+ |
RS3121 |
Unspecified |
| scaffold2401 |
8004 |
8933 |
+ |
RS1367 |
Unspecified |
| scaffold2401 |
9268 |
9707 |
+ |
RS3401 |
Unspecified |
| scaffold2401 |
9779 |
9814 |
+ |
(T)n |
Simple_repeat |
| scaffold2401 |
10444 |
10652 |
+ |
PL247 |
Unspecified |
| scaffold2401 |
10909 |
10966 |
+ |
(AATTTC)n |
Simple_repeat |
| scaffold2401 |
10964 |
11023 |
+ |
(ATTTTT)n |
Simple_repeat |
| scaffold2401 |
11243 |
11291 |
- |
Copia10-VV_LTR |
LTR/Copia |
| scaffold2401 |
11842 |
11881 |
+ |
(TAT)n |
Simple_repeat |
| scaffold2401 |
12257 |
12428 |
- |
RS3341 |
Unspecified |
| scaffold2401 |
12502 |
12796 |
+ |
PL477 |
Unspecified |
| scaffold2401 |
13265 |
13824 |
+ |
RS266 |
Unspecified |
| scaffold2401 |
13922 |
13979 |
+ |
(AATTTC)n |
Simple_repeat |
| scaffold2401 |
13977 |
14036 |
+ |
(ATTTTT)n |
Simple_repeat |
| scaffold2401 |
14426 |
14478 |
+ |
(ATA)n |
Simple_repeat |
| scaffold2401 |
14584 |
14635 |
+ |
(ATTTTTG)n |
Simple_repeat |
| scaffold2401 |
15007 |
15113 |
+ |
RS69 |
Unspecified |
| scaffold2401 |
15040 |
15190 |
+ |
RS4352 |
Unspecified |
| scaffold2401 |
16242 |
16278 |
+ |
(AAAAACA)n |
Simple_repeat |
| scaffold2401 |
17537 |
17615 |
+ |
(CAA)n |
Simple_repeat |
| scaffold2401 |
17587 |
17617 |
+ |
(ACAAC)n |
Simple_repeat |
| scaffold2401 |
17659 |
17718 |
+ |
(CAACAA)n |
Simple_repeat |
| scaffold2401 |
18254 |
18329 |
- |
PL824 |
Unspecified |
| scaffold2401 |
18564 |
18737 |
- |
HAZEAN1 |
DNA/hAT-Ac |
| scaffold2401 |
21966 |
22091 |
- |
PL879 |
Unspecified |
| scaffold2401 |
23270 |
23307 |
+ |
A-rich |
Low_complexity |
| scaffold2401 |
23750 |
23789 |
+ |
A-rich |
Low_complexity |
| scaffold2401 |
26304 |
26466 |
+ |
RS9801 |
Unspecified |
| scaffold2401 |
27109 |
27132 |
+ |
(TTAG)n |
Simple_repeat |
| scaffold2401 |
27617 |
27730 |
- |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold2401 |
27888 |
27966 |
+ |
A-rich |
Low_complexity |
| scaffold2401 |
28117 |
29343 |
+ |
RS245 |
Unspecified |
| scaffold2401 |
30120 |
30196 |
+ |
(AATCAAT)n |
Simple_repeat |
| scaffold2401 |
30422 |
30446 |
+ |
(A)n |
Simple_repeat |
| scaffold2401 |
30695 |
30730 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold2401 |
30784 |
31051 |
+ |
PL350 |
Unspecified |
| scaffold2401 |
31608 |
31644 |
+ |
(TA)n |
Simple_repeat |
| scaffold2401 |
32021 |
32050 |
+ |
A-rich |
Low_complexity |
| scaffold2401 |
32232 |
32274 |
+ |
A-rich |
Low_complexity |
| scaffold2401 |
32373 |
32425 |
+ |
(TTCGATT)n |
Simple_repeat |
| scaffold2401 |
32444 |
32503 |
+ |
A-rich |
Low_complexity |
| scaffold2401 |
32991 |
33236 |
- |
RS4294 |
Unspecified |
| scaffold2401 |
33427 |
33450 |
+ |
(TTTTTAA)n |
Simple_repeat |
| scaffold2401 |
33451 |
33477 |
+ |
(T)n |
Simple_repeat |
| scaffold2401 |
33478 |
33508 |
+ |
(TTTTTAA)n |
Simple_repeat |
| scaffold2401 |
33736 |
33770 |
+ |
(ATATAG)n |
Simple_repeat |
| scaffold2401 |
34133 |
34140 |
+ |
(TAGA)n |
Simple_repeat |
| scaffold2401 |
34141 |
34173 |
+ |
(TAGAT)n |
Simple_repeat |
| scaffold2401 |
34174 |
34188 |
+ |
(TAGA)n |
Simple_repeat |
| scaffold2401 |
34863 |
34880 |
+ |
(T)n |
Simple_repeat |
| scaffold2401 |
35743 |
36983 |
- |
L1-5_STu |
LINE/L1 |
| scaffold2401 |
37175 |
37267 |
- |
L1-18_STu |
LINE/L1 |
| scaffold2401 |
38177 |
38318 |
+ |
EnSpm-11_STu |
DNA/CMC-EnSpm |
| scaffold2401 |
38566 |
39293 |
- |
RS2931 |
Unspecified |
| scaffold2401 |
40517 |
40538 |
+ |
(A)n |
Simple_repeat |
| scaffold2401 |
41387 |
41444 |
+ |
(A)n |
Simple_repeat |
| scaffold2401 |
42082 |
42146 |
+ |
RS17814 |
Unspecified |
| scaffold2401 |
42507 |
42687 |
+ |
(CATA)n |
Simple_repeat |
| scaffold2401 |
42893 |
43090 |
- |
RS2931 |
Unspecified |
| scaffold2401 |
43582 |
43608 |
+ |
(AGA)n |
Simple_repeat |
| scaffold2401 |
44072 |
44140 |
- |
Gypsy-26_ST-I |
LTR/Gypsy |
| scaffold2401 |
45265 |
45322 |
+ |
(CCGGA)n |
Simple_repeat |
| scaffold2401 |
46062 |
46096 |
+ |
(TA)n |
Simple_repeat |
| scaffold2401 |
46104 |
46529 |
+ |
RS2631 |
Unspecified |
| scaffold2401 |
47521 |
48023 |
+ |
RS814 |
Unspecified |
| scaffold2401 |
47810 |
48264 |
- |
RS2777 |
Unspecified |
| scaffold2401 |
48321 |
48380 |
- |
RS12500 |
Unspecified |
| scaffold2401 |
48389 |
48546 |
+ |
(CAA)n |
Simple_repeat |
| scaffold2401 |
48389 |
48434 |
+ |
(CAA)n |
Simple_repeat |
| scaffold2401 |
48427 |
48546 |
- |
RS12500 |
Unspecified |
| scaffold2401 |
48581 |
49810 |
+ |
RS608 |
Unspecified |
| scaffold2401 |
49670 |
49830 |
+ |
RS62 |
Unspecified |
| scaffold2401 |
49729 |
49862 |
- |
PL733 |
Unspecified |
| scaffold2401 |
49859 |
50424 |
+ |
RS1251 |
Unspecified |
| scaffold2401 |
50997 |
51177 |
+ |
(TATG)n |
Simple_repeat |
| scaffold2401 |
51538 |
51718 |
- |
RS17814 |
Unspecified |
| scaffold2401 |
51568 |
52382 |
+ |
RS2931 |
Unspecified |
| scaffold2401 |
53852 |
55092 |
+ |
L1-5_STu |
LINE/L1 |
| scaffold2401 |
70834 |
70870 |
+ |
(ACAATC)n |
Simple_repeat |