scaffold2405 Repeat List
genome start end strand repeat-name repeat-class
scaffold2405 234 300 + (ATATTA)n Simple_repeat
scaffold2405 392 860 - RS2105 Unspecified
scaffold2405 878 1063 + RS8110 Unspecified
scaffold2405 1199 1301 + RS9859 Unspecified
scaffold2405 1340 1771 + RS10580 Unspecified
scaffold2405 2869 2898 + (T)n Simple_repeat
scaffold2405 3166 3206 + GA-rich Low_complexity
scaffold2405 3482 3834 - RS11001 Unspecified
scaffold2405 3981 4004 + (AAAT)n Simple_repeat
scaffold2405 4500 4557 - ATCopia18A_I-int LTR/Copia
scaffold2405 5045 5078 - RS17326 Unspecified
scaffold2405 5228 5259 + (AAT)n Simple_repeat
scaffold2405 5569 5593 + (T)n Simple_repeat
scaffold2405 6056 6092 + (TTCCC)n Simple_repeat
scaffold2405 6250 6513 - PL782 Unspecified
scaffold2405 6553 6694 - TRAMET1 DNA/TcMar-Stowaway
scaffold2405 6819 6944 - PL782 Unspecified
scaffold2405 6940 7001 - RS16382 Unspecified
scaffold2405 7001 7076 - PL436 Unspecified
scaffold2405 7080 7132 - PL69 Unspecified
scaffold2405 7192 7257 + (CAC)n Simple_repeat
scaffold2405 7959 7997 + (T)n Simple_repeat
scaffold2405 8361 8580 + PL358 Unspecified
scaffold2405 8581 8604 + (A)n Simple_repeat
scaffold2405 8621 8676 + (CAC)n Simple_repeat
scaffold2405 8733 8763 + (ACCGAC)n Simple_repeat
scaffold2405 8764 8783 + (TACCGA)n Simple_repeat
scaffold2405 9127 9165 + A-rich Low_complexity
scaffold2405 9681 9711 + Copia-7_BRa-I LTR/Copia
scaffold2405 11370 11548 + RS8110 Unspecified
scaffold2405 11687 11789 + RS9859 Unspecified
scaffold2405 11839 12268 + RS10580 Unspecified
scaffold2405 12783 12868 + (TAT)n Simple_repeat
scaffold2405 13556 13666 + (TCTGAAGTTT)n Simple_repeat
scaffold2405 13685 14230 + (ATT)n Simple_repeat
scaffold2405 13685 13794 + (ATT)n Simple_repeat
scaffold2405 13774 14230 + PL729 Unspecified
scaffold2405 14251 14366 + (TCTGAAGTTT)n Simple_repeat
scaffold2405 14566 14625 + A-rich Low_complexity
scaffold2405 14795 14844 + (A)n Simple_repeat
scaffold2405 14857 14967 + RS452 Unspecified
scaffold2405 15065 15113 + A-rich Low_complexity
scaffold2405 15523 15570 + A-rich Low_complexity
scaffold2405 15632 16630 - RS1447 Unspecified
scaffold2405 16802 17020 - RS537 Unspecified
scaffold2405 17381 17411 + (GGT)n Simple_repeat
scaffold2405 17716 18026 - PL744 Unspecified
scaffold2405 18111 18148 + (TTTTA)n Simple_repeat
scaffold2405 18149 18156 + (TATTTTT)n Simple_repeat
scaffold2405 18164 18316 - RS106 Unspecified
scaffold2405 18316 18600 - LTR2-ZM_LTR LTR
scaffold2405 18661 18710 - PL387 Unspecified
scaffold2405 19067 19171 - RS17877 Unspecified
scaffold2405 19321 19368 + A-rich Low_complexity
scaffold2405 19550 19581 + (A)n Simple_repeat
scaffold2405 20483 21016 + TY1_Copia TY1_Copia(TransposonPSI)
scaffold2405 21181 21231 + COP3_I_MT-int LTR/Copia
scaffold2405 21430 21859 - RS10580 Unspecified
scaffold2405 21909 22011 - RS9859 Unspecified
scaffold2405 22163 22323 - RS8110 Unspecified
scaffold2405 23763 23797 + RS1589 Unspecified
scaffold2405 23798 23833 + (TTGTAA)n Simple_repeat
scaffold2405 24270 24296 + (AACCCA)n Simple_repeat
scaffold2405 25592 25630 + A-rich Low_complexity
scaffold2405 25924 26026 + RS9859 Unspecified
scaffold2405 26070 26481 + RS10580 Unspecified
scaffold2405 27419 27793 - Copia-2_SL-LTR LTR/Copia
scaffold2405 28981 29029 + RS8110 Unspecified
scaffold2405 29031 29191 + RS8110 Unspecified
scaffold2405 29316 29418 + RS9859 Unspecified
scaffold2405 29450 29869 + RS10580 Unspecified
scaffold2405 30443 30497 - RS84 Unspecified
scaffold2405 30694 30752 + (AATTC)n Simple_repeat
scaffold2405 32346 32376 + (CAAT)n Simple_repeat
scaffold2405 32467 32496 + (ATTT)n Simple_repeat
scaffold2405 32729 32785 + (AATATG)n Simple_repeat
scaffold2405 33785 33847 + RAVLIN2_MT LINE/L1
scaffold2405 34231 34316 + LINE1B_MT LINE/L1
scaffold2405 34487 34537 - Copia10-VV_LTR LTR/Copia
scaffold2405 35702 35742 - TOPIE1_LE_I-int LTR/Copia
scaffold2405 37735 37766 + G-rich Low_complexity
scaffold2405 38053 38238 - PREM3_ZM_I-int LTR/Copia
scaffold2405 41520 41912 - COPIA-I_MT LTR/Copia
scaffold2405 41979 44033 - TY1_Copia TY1_Copia(TransposonPSI)
scaffold2405 42675 42712 + (TTCAGTT)n Simple_repeat
scaffold2405 43152 43247 - Gypsy65-ZM_I-int LTR/Gypsy
scaffold2405 43438 43529 - COPIA-I_MT LTR/Copia
scaffold2405 43585 43797 - TORTL1 LTR/Copia
scaffold2405 44118 44234 - Copia10-VV_LTR LTR/Copia
scaffold2405 44990 45397 + RS2174 Unspecified
scaffold2405 45448 46217 - RS2725 Unspecified
scaffold2405 46423 46453 + (T)n Simple_repeat
scaffold2405 48180 48228 + (TGAAC)n Simple_repeat
scaffold2405 48241 48272 + (A)n Simple_repeat
scaffold2405 49376 49414 + (TCCTGTT)n Simple_repeat
scaffold2405 50718 50758 + (ATTT)n Simple_repeat
scaffold2405 52728 52949 + RS1901 Unspecified
scaffold2405 54349 54480 + RS5871 Unspecified
scaffold2405 54808 54843 + (TTTTCCT)n Simple_repeat
scaffold2405 55158 55416 + (TCGGG)n Simple_repeat
scaffold2405 55469 55537 + (ATTTA)n Simple_repeat
scaffold2405 55576 55763 + (TCGGG)n Simple_repeat
scaffold2405 56300 56332 + (CCCCTC)n Simple_repeat
scaffold2405 56617 56649 + (A)n Simple_repeat
scaffold2405 57245 59233 + LINE LINE(TransposonPSI)
scaffold2405 58256 59136 + SHALINE10_MT LINE/L1
scaffold2405 61225 61262 + (A)n Simple_repeat
scaffold2405 61912 61950 + (TAATAAC)n Simple_repeat
scaffold2405 62565 62817 + (CTGAA)n Simple_repeat
scaffold2405 63041 63073 + (ACAATG)n Simple_repeat
scaffold2405 63502 63766 + RS373 Unspecified
scaffold2405 64438 64547 - RS4475 Unspecified
scaffold2405 64838 64877 + (AATAATT)n Simple_repeat
scaffold2405 65222 65355 - RS4042 Unspecified
scaffold2405 65225 65414 - RS748 Unspecified
scaffold2405 65240 65406 + RS898 Unspecified
scaffold2405 65876 65927 + Copia-5_CP-I LTR/Copia
scaffold2405 66171 66205 + (ATTGTAT)n Simple_repeat
scaffold2405 66678 67017 + Copia-5_CP-I LTR/Copia
scaffold2405 67123 67431 + Copia-2_PTri-I LTR/Copia
scaffold2405 71273 71472 + PL260 Unspecified
scaffold2405 71471 71582 + RS898 Unspecified
scaffold2405 72019 72165 + RS407 Unspecified
scaffold2405 72985 73032 + (ATA)n Simple_repeat
scaffold2405 73893 73910 + (A)n Simple_repeat
scaffold2405 74109 74290 + RS79 Unspecified
scaffold2405 74647 74684 + ATRAN DNA?
scaffold2405 74759 74901 - RS114 Unspecified
scaffold2405 74946 74990 + (A)n Simple_repeat
scaffold2405 75165 75201 + A-rich Low_complexity
scaffold2405 75514 75568 + (GTACTTT)n Simple_repeat
scaffold2405 75620 75848 + RS958 Unspecified
scaffold2405 75889 75950 + (ATTATA)n Simple_repeat
scaffold2405 76080 76153 + RS1018 Unspecified
scaffold2405 76153 76183 - PL560 Unspecified
scaffold2405 76986 77075 + LTR-7_Mad-LTR LTR
scaffold2405 77076 77086 + LT1_EPa LTR?
scaffold2405 77557 77582 + (AAT)n Simple_repeat
scaffold2405 78028 78044 + (T)n Simple_repeat
scaffold2405 78090 78118 + A-rich Low_complexity
scaffold2405 79607 79613 + (TTATTTA)n Simple_repeat
scaffold2405 79614 79674 + (ATT)n Simple_repeat
scaffold2405 80069 80092 + (T)n Simple_repeat
scaffold2405 80297 80360 + (AAT)n Simple_repeat
scaffold2405 80502 80540 + (TTTTA)n Simple_repeat
scaffold2405 80673 80723 + (ATCAA)n Simple_repeat
scaffold2405 86274 86302 + (AAC)n Simple_repeat
scaffold2405 86780 86812 + A-rich Low_complexity
scaffold2405 87149 87177 + GA-rich Low_complexity
scaffold2405 87298 87347 + A-rich Low_complexity
scaffold2405 87426 87687 + RS185 Unspecified
scaffold2405 87704 87910 + RS17860 Unspecified
scaffold2405 87928 88188 + RS736 Unspecified
scaffold2405 88464 88907 + PL773 Unspecified
scaffold2405 88951 88967 + (T)n Simple_repeat
scaffold2405 90324 90370 + A-rich Low_complexity
scaffold2405 91221 91241 + (A)n Simple_repeat
scaffold2405 91529 91583 + (TTTGTAC)n Simple_repeat
scaffold2405 91672 91722 + (CAGTT)n Simple_repeat
scaffold2405 91792 91823 + (TGTAGT)n Simple_repeat
scaffold2405 92170 92207 + (TTA)n Simple_repeat
scaffold2405 92403 92441 + (ATTA)n Simple_repeat
scaffold2405 92602 92896 - RS13658 Unspecified
scaffold2405 93231 93285 + (CCCACA)n Simple_repeat
scaffold2405 93504 93572 + (TCAA)n Simple_repeat
scaffold2405 93818 93885 + A-rich Low_complexity
scaffold2405 94469 94708 + RS2134 Unspecified
scaffold2405 94720 95055 - RS2505 Unspecified
scaffold2405 95335 95370 - HELMET2 RC/Helitron
scaffold2405 95842 95955 - RS9242 Unspecified
scaffold2405 96088 96283 + RS14573 Unspecified
scaffold2405 96388 96578 - RS10804 Unspecified
scaffold2405 96593 96946 - RS8269 Unspecified
scaffold2405 96936 97368 + RS17587 Unspecified
scaffold2405 97468 97552 + (A)n Simple_repeat
scaffold2405 97617 97648 + (ACAATG)n Simple_repeat
scaffold2405 98235 98344 - RS17299 Unspecified
scaffold2405 98608 98719 + RS17167 Unspecified
scaffold2405 98868 98944 - Helitron-3_Mad RC/Helitron
scaffold2405 99326 99537 + RS16272 Unspecified
scaffold2405 99545 99596 + A-rich Low_complexity
scaffold2405 100010 100163 - RS8495 Unspecified
scaffold2405 100083 100200 - RS3422 Unspecified
scaffold2405 100201 100238 + (AAT)n Simple_repeat
scaffold2405 100753 100774 + GA-rich Low_complexity
scaffold2405 100775 100812 + (AAT)n Simple_repeat
scaffold2405 100813 100859 + A-rich Low_complexity
scaffold2405 101120 101136 + (T)n Simple_repeat
scaffold2405 102329 102367 + A-rich Low_complexity
scaffold2405 104141 104230 - LTR-7_Mad-LTR LTR
scaffold2405 109013 109040 + A-rich Low_complexity
scaffold2405 109596 109653 + (TTT)n Simple_repeat
scaffold2405 111758 112182 + PL259 Unspecified
scaffold2405 116667 116898 + RS18 Unspecified
scaffold2405 116899 117031 + RS18 Unspecified
scaffold2405 117149 117548 - PL352 Unspecified
scaffold2405 118963 119571 - PL492 Unspecified
scaffold2405 119669 119743 + (TATTA)n Simple_repeat
scaffold2405 119882 119913 + (AATTAA)n Simple_repeat
scaffold2405 120468 120505 + (AAAAT)n Simple_repeat
scaffold2405 121120 121155 + (ATTTT)n Simple_repeat
scaffold2405 121552 121582 + (CATA)n Simple_repeat
scaffold2405 122582 122624 + (CCTCT)n Simple_repeat
scaffold2405 122626 122644 + (TTTT)n Simple_repeat
scaffold2405 122645 122683 + (TC)n Simple_repeat
scaffold2405 122684 122734 + (TTTT)n Simple_repeat
scaffold2405 122786 122843 + (TGG)n Simple_repeat
scaffold2405 122889 122936 + (T)n Simple_repeat
scaffold2405 123040 123058 + (T)n Simple_repeat
scaffold2405 123634 123661 + (ATAAT)n Simple_repeat
scaffold2405 123767 123796 + (A)n Simple_repeat
scaffold2405 124075 124112 + A-rich Low_complexity
scaffold2405 124794 124874 + A-rich Low_complexity
scaffold2405 125491 125587 + (CCACCG)n Simple_repeat
scaffold2405 126027 126068 + (CCGACG)n Simple_repeat
scaffold2405 126333 126372 + (TGTGGT)n Simple_repeat
scaffold2405 127026 127044 + (T)n Simple_repeat
scaffold2405 127479 127509 + (AAGGG)n Simple_repeat
scaffold2405 127591 127640 + A-rich Low_complexity
scaffold2405 128306 128421 - RS15138 Unspecified
scaffold2405 128324 128596 + RS1 Unspecified
scaffold2405 128916 128940 + (TAA)n Simple_repeat
scaffold2405 129085 129349 + RS356 Unspecified
scaffold2405 130855 130916 + (TTTTA)n Simple_repeat
scaffold2405 131275 131456 - RS5 Unspecified
scaffold2405 131531 131882 + RS614 Unspecified
scaffold2405 132800 132987 - RS1 Unspecified
scaffold2405 135389 135426 + (TATTAC)n Simple_repeat
scaffold2405 136049 136295 + RS1963 Unspecified
scaffold2405 136485 136754 + RS4686 Unspecified
scaffold2405 136628 137035 + PL143 Unspecified
scaffold2405 137075 137154 - PL736 Unspecified
scaffold2405 137440 137473 + (CCTT)n Simple_repeat
scaffold2405 140297 140802 + RS169 Unspecified
scaffold2405 140748 140810 - PL705 Unspecified
scaffold2405 140824 142397 - Copia-84_ST-I LTR/Copia
scaffold2405 142542 142601 + (TCT)n Simple_repeat
scaffold2405 142770 143626 - Copia-84_ST-I LTR/Copia
scaffold2405 143901 144039 - Copia-84_ST-I LTR/Copia
scaffold2405 144619 144693 - Copia-84_ST-I LTR/Copia
scaffold2405 144826 145113 - TY1_Copia TY1_Copia(TransposonPSI)
scaffold2405 146056 146073 + (ATC)n Simple_repeat
scaffold2405 147167 147197 + (ATA)n Simple_repeat
scaffold2405 147198 147245 + (TAT)n Simple_repeat
scaffold2405 149128 149194 + (TAT)n Simple_repeat
scaffold2405 149226 149266 + RS5272 Unspecified
scaffold2405 149364 149401 + A-rich Low_complexity
scaffold2405 149573 149723 + RS5272 Unspecified
scaffold2405 149723 149873 - PL699 Unspecified
scaffold2405 150230 150308 + (ATA)n Simple_repeat
scaffold2405 151250 151697 + PL2 Unspecified
scaffold2405 151824 151889 + (ATGGATG)n Simple_repeat
scaffold2405 152063 152098 + (T)n Simple_repeat
scaffold2405 152317 152507 + Copia-32-I_VV LTR/Copia
scaffold2405 152548 152822 - LTR2-ZM_LTR LTR
scaffold2405 153027 153310 - LTR-1_SBi-LTR LTR
scaffold2405 153592 153940 + Copia-32-I_VV LTR/Copia
scaffold2405 154036 154105 + PL68 Unspecified
scaffold2405 156416 156783 + PL255 Unspecified
scaffold2405 157073 157117 + (CGAGTCC)n Simple_repeat
scaffold2405 158329 158377 + (ACCAA)n Simple_repeat
scaffold2405 158499 158566 + A-rich Low_complexity
scaffold2405 158639 158664 + (A)n Simple_repeat
scaffold2405 158682 159229 - RS637 Unspecified
scaffold2405 159185 159246 - RS637 Unspecified
scaffold2405 159248 159331 + RS6307 Unspecified
scaffold2405 159558 159586 + (ACGGAC)n Simple_repeat
scaffold2405 159755 159788 + (TTACAAA)n Simple_repeat
scaffold2405 160813 160855 + (TGTTG)n Simple_repeat
scaffold2405 161472 161498 + (TTG)n Simple_repeat
scaffold2405 161523 161554 + (AG)n Simple_repeat
scaffold2405 166830 166867 + (CCTTTG)n Simple_repeat
scaffold2405 172062 172853 + TY1_Copia TY1_Copia(TransposonPSI)
scaffold2405 172470 172649 + Copia-71_VV-I LTR/Copia
scaffold2405 172955 173000 + Copia-71_VV-I LTR/Copia
scaffold2405 172997 174106 + Copia-71_VV-I LTR/Copia
scaffold2405 174463 176012 + Copia-71_VV-I LTR/Copia
scaffold2405 176929 176965 + (T)n Simple_repeat
scaffold2405 176978 176991 + A-rich Low_complexity
scaffold2405 176992 177008 + (A)n Simple_repeat
scaffold2405 177009 177024 + A-rich Low_complexity
scaffold2405 177119 177153 + (T)n Simple_repeat
scaffold2405 177181 177198 + (A)n Simple_repeat