scaffold24327 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold24327 |
215 |
322 |
+ |
RS16671 |
Unspecified |
| scaffold24327 |
874 |
916 |
+ |
(A)n |
Simple_repeat |
| scaffold24327 |
931 |
948 |
+ |
(A)n |
Simple_repeat |
| scaffold24327 |
3669 |
3931 |
+ |
RS243 |
Unspecified |
| scaffold24327 |
3737 |
4001 |
- |
RS15302 |
Unspecified |
| scaffold24327 |
3926 |
4015 |
+ |
RS835 |
Unspecified |
| scaffold24327 |
6636 |
6699 |
+ |
(AATTAGTA)n |
Simple_repeat |
| scaffold24327 |
6857 |
6874 |
+ |
(CTCAT)n |
Simple_repeat |
| scaffold24327 |
6875 |
6900 |
+ |
(TCAT)n |
Simple_repeat |
| scaffold24327 |
6994 |
7780 |
- |
Copia-71_ST-I |
LTR/Copia |
| scaffold24327 |
7758 |
8063 |
- |
RS9519 |
Unspecified |
| scaffold24327 |
8143 |
8992 |
- |
Copia-71_ST-I |
LTR/Copia |
| scaffold24327 |
9298 |
9580 |
- |
Copia-71_ST-I |
LTR/Copia |
| scaffold24327 |
9790 |
10593 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold24327 |
10229 |
10569 |
- |
Copia-71_ST-I |
LTR/Copia |
| scaffold24327 |
10923 |
11194 |
- |
RS1842 |
Unspecified |
| scaffold24327 |
12551 |
12925 |
- |
RS1250 |
Unspecified |
| scaffold24327 |
12760 |
13150 |
- |
RS1873 |
Unspecified |
| scaffold24327 |
13091 |
13698 |
+ |
RS1250 |
Unspecified |
| scaffold24327 |
13870 |
13903 |
+ |
(T)n |
Simple_repeat |
| scaffold24327 |
14731 |
14820 |
+ |
(TAA)n |
Simple_repeat |
| scaffold24327 |
14821 |
14859 |
+ |
A-rich |
Low_complexity |
| scaffold24327 |
15160 |
15210 |
+ |
A-rich |
Low_complexity |
| scaffold24327 |
15315 |
15411 |
- |
RS869 |
Unspecified |
| scaffold24327 |
15407 |
15923 |
+ |
RIRE1_I-int |
LTR/Copia |
| scaffold24327 |
16131 |
18096 |
+ |
RIRE1_I-int |
LTR/Copia |
| scaffold24327 |
16131 |
19203 |
+ |
RIRE1_I-int |
LTR/Copia |
| scaffold24327 |
17712 |
19203 |
+ |
RS482 |
Unspecified |
| scaffold24327 |
18111 |
19013 |
- |
RS3808 |
Unspecified |
| scaffold24327 |
19353 |
19615 |
+ |
RS356 |
Unspecified |
| scaffold24327 |
19905 |
19952 |
+ |
(TAA)n |
Simple_repeat |
| scaffold24327 |
19953 |
19985 |
+ |
(AGTTA)n |
Simple_repeat |
| scaffold24327 |
20286 |
20336 |
+ |
A-rich |
Low_complexity |
| scaffold24327 |
20796 |
20899 |
- |
RS13288 |
Unspecified |
| scaffold24327 |
21377 |
21481 |
+ |
(TTG)n |
Simple_repeat |
| scaffold24327 |
21721 |
21858 |
- |
RS5523 |
Unspecified |
| scaffold24327 |
21896 |
22121 |
- |
RS356 |
Unspecified |
| scaffold24327 |
22141 |
22304 |
+ |
RS7440 |
Unspecified |
| scaffold24327 |
22549 |
22934 |
- |
RS6260 |
Unspecified |
| scaffold24327 |
23130 |
23609 |
- |
Copia-39-I_ZM |
LTR/Copia |
| scaffold24327 |
23671 |
23981 |
- |
Copia-92_Mad-I |
LTR/Copia |
| scaffold24327 |
24431 |
24506 |
- |
Copia-92_Mad-I |
LTR/Copia |
| scaffold24327 |
25937 |
25963 |
+ |
(ATTCA)n |
Simple_repeat |
| scaffold24327 |
26099 |
26180 |
+ |
(ATT)n |
Simple_repeat |
| scaffold24327 |
26919 |
27892 |
+ |
RS135 |
Unspecified |
| scaffold24327 |
29492 |
29716 |
+ |
OARE1_I-int |
LTR/Copia |
| scaffold24327 |
30051 |
30095 |
+ |
(T)n |
Simple_repeat |
| scaffold24327 |
30320 |
30578 |
- |
RS13996 |
Unspecified |
| scaffold24327 |
31177 |
32571 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold24327 |
32734 |
33574 |
+ |
RS482 |
Unspecified |
| scaffold24327 |
34412 |
34518 |
+ |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold24327 |
35540 |
35587 |
- |
RS144 |
Unspecified |
| scaffold24327 |
35655 |
35697 |
+ |
(ACAATA)n |
Simple_repeat |
| scaffold24327 |
35698 |
35721 |
+ |
(T)n |
Simple_repeat |
| scaffold24327 |
35748 |
35808 |
+ |
A-rich |
Low_complexity |
| scaffold24327 |
36356 |
36476 |
+ |
RS116 |
Unspecified |
| scaffold24327 |
36698 |
36790 |
- |
PL296 |
Unspecified |
| scaffold24327 |
36715 |
36793 |
- |
PL289 |
Unspecified |
| scaffold24327 |
36893 |
37163 |
+ |
RS1943 |
Unspecified |
| scaffold24327 |
37630 |
37997 |
+ |
(ATTAATA)n |
Simple_repeat |
| scaffold24327 |
37630 |
37717 |
+ |
(ATTAATA)n |
Simple_repeat |
| scaffold24327 |
37695 |
37997 |
- |
PL289 |
Unspecified |
| scaffold24327 |
37941 |
38089 |
+ |
PL754 |
Unspecified |
| scaffold24327 |
37996 |
38089 |
+ |
RS16382 |
Unspecified |
| scaffold24327 |
39406 |
39436 |
+ |
(TA)n |
Simple_repeat |
| scaffold24327 |
40391 |
40419 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold24327 |
40460 |
40605 |
+ |
PL169 |
Unspecified |
| scaffold24327 |
40597 |
40679 |
+ |
PL169 |
Unspecified |
| scaffold24327 |
40659 |
40829 |
+ |
PL663 |
Unspecified |
| scaffold24327 |
40688 |
41345 |
+ |
RS4333 |
Unspecified |
| scaffold24327 |
40962 |
41526 |
+ |
RS6261 |
Unspecified |
| scaffold24327 |
41406 |
41595 |
+ |
RS9412 |
Unspecified |
| scaffold24327 |
41637 |
41847 |
- |
RS22 |
Unspecified |
| scaffold24327 |
41907 |
42111 |
+ |
RS5823 |
Unspecified |
| scaffold24327 |
42167 |
42214 |
+ |
(ACATTA)n |
Simple_repeat |
| scaffold24327 |
42349 |
42442 |
+ |
RS14131 |
Unspecified |
| scaffold24327 |
42509 |
42690 |
+ |
RS8771 |
Unspecified |
| scaffold24327 |
42800 |
42831 |
+ |
(TAATCA)n |
Simple_repeat |
| scaffold24327 |
42889 |
43118 |
- |
RS9625 |
Unspecified |
| scaffold24327 |
43144 |
43184 |
- |
RS9625 |
Unspecified |
| scaffold24327 |
43229 |
43356 |
+ |
RS8922 |
Unspecified |
| scaffold24327 |
43733 |
43779 |
+ |
(TCTTTTG)n |
Simple_repeat |
| scaffold24327 |
43868 |
44159 |
- |
RS1842 |
Unspecified |
| scaffold24327 |
44235 |
44923 |
- |
Copia28-VV_I-int |
LTR/Copia |