scaffold24424 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold24424 |
133 |
511 |
+ |
RS647 |
Unspecified |
| scaffold24424 |
326 |
785 |
+ |
(CATTCA)n |
Simple_repeat |
| scaffold24424 |
742 |
785 |
+ |
(CATTCA)n |
Simple_repeat |
| scaffold24424 |
773 |
1696 |
+ |
RS526 |
Unspecified |
| scaffold24424 |
916 |
1380 |
+ |
RS4344 |
Unspecified |
| scaffold24424 |
1527 |
1591 |
+ |
(TACA)n |
Simple_repeat |
| scaffold24424 |
1835 |
2022 |
+ |
RS647 |
Unspecified |
| scaffold24424 |
2075 |
2142 |
- |
ENSPM2_VV |
DNA/CMC-EnSpm |
| scaffold24424 |
2522 |
2723 |
- |
RS2407 |
Unspecified |
| scaffold24424 |
2739 |
2899 |
+ |
RS4570 |
Unspecified |
| scaffold24424 |
3682 |
3841 |
+ |
RS6012 |
Unspecified |
| scaffold24424 |
4288 |
4333 |
- |
RIRE1_I-int |
LTR/Copia |
| scaffold24424 |
4739 |
4797 |
+ |
GA-rich |
Low_complexity |
| scaffold24424 |
4879 |
5191 |
+ |
ENSPM-6_ZM |
DNA/CMC-EnSpm |
| scaffold24424 |
4879 |
5069 |
+ |
ENSPM-6_ZM |
DNA/CMC-EnSpm |
| scaffold24424 |
4983 |
5191 |
- |
RS183 |
Unspecified |
| scaffold24424 |
5185 |
6429 |
- |
PL595 |
Unspecified |
| scaffold24424 |
6430 |
6757 |
- |
RS395 |
Unspecified |
| scaffold24424 |
7060 |
7773 |
- |
MuDR-1_PD |
DNA/MULE-MuDR |
| scaffold24424 |
8394 |
8442 |
+ |
(TCACAC)n |
Simple_repeat |
| scaffold24424 |
9231 |
9386 |
+ |
RS10986 |
Unspecified |
| scaffold24424 |
9414 |
9578 |
+ |
RS7238 |
Unspecified |
| scaffold24424 |
9542 |
9774 |
+ |
PL223 |
Unspecified |
| scaffold24424 |
9671 |
10040 |
+ |
RS3995 |
Unspecified |
| scaffold24424 |
10064 |
10265 |
+ |
RS2651 |
Unspecified |
| scaffold24424 |
10097 |
10268 |
- |
RS6056 |
Unspecified |
| scaffold24424 |
10259 |
10456 |
- |
RS585 |
Unspecified |
| scaffold24424 |
10679 |
10708 |
+ |
(GCCCG)n |
Simple_repeat |
| scaffold24424 |
10729 |
10794 |
- |
RS585 |
Unspecified |
| scaffold24424 |
10820 |
11203 |
- |
RS4957 |
Unspecified |
| scaffold24424 |
11328 |
11429 |
- |
EnSpm-5_Mad |
DNA/CMC-EnSpm |
| scaffold24424 |
11595 |
12729 |
- |
RS306 |
Unspecified |
| scaffold24424 |
12954 |
13011 |
+ |
(TAT)n |
Simple_repeat |
| scaffold24424 |
13217 |
13258 |
+ |
(AAT)n |
Simple_repeat |
| scaffold24424 |
14041 |
14229 |
- |
RS14279 |
Unspecified |
| scaffold24424 |
14152 |
14381 |
+ |
RS12136 |
Unspecified |
| scaffold24424 |
14387 |
14570 |
+ |
RS1403 |
Unspecified |
| scaffold24424 |
15342 |
15426 |
- |
L1-8_STu |
LINE/L1 |
| scaffold24424 |
17316 |
17356 |
+ |
(AAT)n |
Simple_repeat |
| scaffold24424 |
17409 |
17449 |
+ |
(AAAACTTCAG)n |
Simple_repeat |
| scaffold24424 |
17699 |
18115 |
+ |
RS3487 |
Unspecified |
| scaffold24424 |
18355 |
18401 |
+ |
RS884 |
Unspecified |
| scaffold24424 |
18700 |
18771 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold24424 |
19023 |
19079 |
+ |
A-rich |
Low_complexity |
| scaffold24424 |
19306 |
19348 |
+ |
(CT)n |
Simple_repeat |
| scaffold24424 |
19485 |
19536 |
+ |
A-rich |
Low_complexity |
| scaffold24424 |
19663 |
19720 |
+ |
(TCA)n |
Simple_repeat |
| scaffold24424 |
19979 |
20129 |
+ |
RS1764 |
Unspecified |
| scaffold24424 |
20271 |
20324 |
+ |
A-rich |
Low_complexity |
| scaffold24424 |
20382 |
20596 |
- |
RS4294 |
Unspecified |
| scaffold24424 |
21241 |
21879 |
+ |
RS1069 |
Unspecified |
| scaffold24424 |
21880 |
22412 |
+ |
RS1069 |
Unspecified |
| scaffold24424 |
22601 |
22657 |
+ |
(ATAGATTAT)n |
Simple_repeat |
| scaffold24424 |
22914 |
22961 |
+ |
(ATATAG)n |
Simple_repeat |
| scaffold24424 |
23108 |
23155 |
+ |
PL201 |
Unspecified |
| scaffold24424 |
23216 |
23254 |
+ |
(TTCTCTC)n |
Simple_repeat |
| scaffold24424 |
23338 |
23389 |
+ |
(ACCACCC)n |
Simple_repeat |
| scaffold24424 |
23816 |
24011 |
- |
RS1796 |
Unspecified |
| scaffold24424 |
27374 |
27525 |
+ |
(AGCTG)n |
Simple_repeat |
| scaffold24424 |
27567 |
27601 |
+ |
(AAT)n |
Simple_repeat |
| scaffold24424 |
28269 |
28465 |
+ |
(AGCTG)n |
Simple_repeat |
| scaffold24424 |
28510 |
28555 |
+ |
(AACA)n |
Simple_repeat |
| scaffold24424 |
28720 |
28751 |
+ |
(GAGGAA)n |
Simple_repeat |
| scaffold24424 |
30412 |
30452 |
+ |
(CAG)n |
Simple_repeat |
| scaffold24424 |
31177 |
31218 |
+ |
(TCCCCTTCCC)n |
Simple_repeat |
| scaffold24424 |
31320 |
31361 |
+ |
(GAGGGAAGGG)n |
Simple_repeat |
| scaffold24424 |
31632 |
31668 |
+ |
(ACTTTAA)n |
Simple_repeat |
| scaffold24424 |
32164 |
32244 |
+ |
(TTTTTT)n |
Simple_repeat |
| scaffold24424 |
32261 |
32300 |
+ |
(GGC)n |
Simple_repeat |
| scaffold24424 |
32301 |
32351 |
+ |
(TGGCTG)n |
Simple_repeat |
| scaffold24424 |
32722 |
32773 |
+ |
(GGT)n |
Simple_repeat |
| scaffold24424 |
34556 |
34579 |
+ |
(A)n |
Simple_repeat |
| scaffold24424 |
35093 |
35139 |
+ |
A-rich |
Low_complexity |
| scaffold24424 |
35995 |
36068 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold24424 |
46396 |
46469 |
+ |
(A)n |
Simple_repeat |
| scaffold24424 |
50389 |
50471 |
+ |
A-rich |
Low_complexity |
| scaffold24424 |
50597 |
50675 |
+ |
A-rich |
Low_complexity |
| scaffold24424 |
50875 |
50893 |
+ |
(T)n |
Simple_repeat |
| scaffold24424 |
51077 |
51106 |
+ |
(GAGTT)n |
Simple_repeat |
| scaffold24424 |
52877 |
52908 |
+ |
GA-rich |
Low_complexity |
| scaffold24424 |
53392 |
53520 |
- |
RS427 |
Unspecified |
| scaffold24424 |
53563 |
53638 |
+ |
Gypsy-13_TA-I |
LTR/Gypsy |
| scaffold24424 |
53847 |
53879 |
+ |
(TTAATT)n |
Simple_repeat |
| scaffold24424 |
54514 |
54566 |
+ |
(ATTTTG)n |
Simple_repeat |