scaffold24543 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold24543 |
84 |
140 |
+ |
(GTATCG)n |
Simple_repeat |
| scaffold24543 |
573 |
603 |
+ |
(AATTCA)n |
Simple_repeat |
| scaffold24543 |
1215 |
1286 |
- |
Tvv1_I-int |
LTR/Copia |
| scaffold24543 |
1612 |
1681 |
+ |
RS5040 |
Unspecified |
| scaffold24543 |
2234 |
2471 |
- |
RS376 |
Unspecified |
| scaffold24543 |
2383 |
2488 |
+ |
RS3380 |
Unspecified |
| scaffold24543 |
2594 |
2821 |
+ |
RS18 |
Unspecified |
| scaffold24543 |
2861 |
3108 |
+ |
PL271 |
Unspecified |
| scaffold24543 |
2873 |
3093 |
- |
PL6 |
Unspecified |
| scaffold24543 |
3832 |
3867 |
+ |
A-rich |
Low_complexity |
| scaffold24543 |
3832 |
4169 |
+ |
A-rich |
Low_complexity |
| scaffold24543 |
3862 |
4169 |
+ |
RS499 |
Unspecified |
| scaffold24543 |
4488 |
4516 |
+ |
(CTCCT)n |
Simple_repeat |
| scaffold24543 |
4522 |
4639 |
+ |
(TCTTTT)n |
Simple_repeat |
| scaffold24543 |
4796 |
4834 |
+ |
(TGT)n |
Simple_repeat |
| scaffold24543 |
4886 |
5043 |
- |
RS1718 |
Unspecified |
| scaffold24543 |
5366 |
5393 |
+ |
(ATAAT)n |
Simple_repeat |
| scaffold24543 |
5463 |
5531 |
+ |
GA-rich |
Low_complexity |
| scaffold24543 |
5647 |
6142 |
+ |
RS1464 |
Unspecified |
| scaffold24543 |
6092 |
6297 |
+ |
RS15302 |
Unspecified |
| scaffold24543 |
6476 |
6526 |
+ |
(CCA)n |
Simple_repeat |
| scaffold24543 |
6865 |
6954 |
+ |
G-rich |
Low_complexity |
| scaffold24543 |
8116 |
8666 |
- |
PL134 |
Unspecified |
| scaffold24543 |
9337 |
9827 |
- |
Gypsy-36_Mad-I |
LTR/Gypsy |
| scaffold24543 |
10077 |
10675 |
- |
Gypsy-36_Mad-I |
LTR/Gypsy |
| scaffold24543 |
10863 |
11131 |
+ |
Gypsy-28_Mad-I |
LTR/Gypsy |
| scaffold24543 |
10863 |
11230 |
+ |
Gypsy-28_Mad-I |
LTR/Gypsy |
| scaffold24543 |
11102 |
11230 |
+ |
RS2294 |
Unspecified |
| scaffold24543 |
12147 |
12285 |
+ |
RS22 |
Unspecified |
| scaffold24543 |
12286 |
12490 |
- |
RS201 |
Unspecified |
| scaffold24543 |
12897 |
12935 |
+ |
(TTTTTGA)n |
Simple_repeat |
| scaffold24543 |
13847 |
14129 |
- |
L1-15_GM |
LINE/L1 |
| scaffold24543 |
14197 |
15039 |
- |
L1-1_PTr |
LINE/L1 |
| scaffold24543 |
15236 |
15319 |
- |
L1-5_GM |
LINE/L1 |
| scaffold24543 |
16230 |
16353 |
- |
L1-1_PTr |
LINE/L1 |
| scaffold24543 |
18572 |
18630 |
+ |
(ATTATT)n |
Simple_repeat |
| scaffold24543 |
19140 |
19217 |
+ |
EnSpm-6_STu |
DNA/CMC-EnSpm |
| scaffold24543 |
19357 |
20214 |
+ |
EnSpm-6_STu |
DNA/CMC-EnSpm |
| scaffold24543 |
20586 |
20881 |
+ |
EnSpm-2_STu |
DNA/CMC-EnSpm |
| scaffold24543 |
21042 |
21194 |
+ |
(CGA)n |
Simple_repeat |
| scaffold24543 |
23921 |
23991 |
+ |
RS549 |
Unspecified |
| scaffold24543 |
24852 |
25099 |
- |
PL564 |
Unspecified |
| scaffold24543 |
25847 |
26242 |
+ |
PL5 |
Unspecified |
| scaffold24543 |
26258 |
26388 |
- |
RS4262 |
Unspecified |
| scaffold24543 |
27079 |
27625 |
- |
Copia-27_ST-I |
LTR/Copia |
| scaffold24543 |
28225 |
28243 |
+ |
(AT)n |
Simple_repeat |
| scaffold24543 |
28601 |
28758 |
+ |
RS9602 |
Unspecified |
| scaffold24543 |
28867 |
28914 |
+ |
A-rich |
Low_complexity |
| scaffold24543 |
29267 |
29373 |
+ |
COPI1_LTR |
LTR/Copia |
| scaffold24543 |
29490 |
29548 |
+ |
RS9602 |
Unspecified |
| scaffold24543 |
30778 |
30824 |
+ |
A-rich |
Low_complexity |
| scaffold24543 |
34205 |
34306 |
+ |
A-rich |
Low_complexity |
| scaffold24543 |
36446 |
36509 |
+ |
(AAT)n |
Simple_repeat |
| scaffold24543 |
37493 |
37529 |
+ |
(TCTTTTA)n |
Simple_repeat |
| scaffold24543 |
38001 |
39498 |
- |
RS245 |
Unspecified |
| scaffold24543 |
39492 |
39981 |
+ |
RS1381 |
Unspecified |
| scaffold24543 |
39643 |
40125 |
- |
RS4231 |
Unspecified |
| scaffold24543 |
42004 |
42359 |
- |
RS2947 |
Unspecified |
| scaffold24543 |
42530 |
43345 |
- |
RS5577 |
Unspecified |
| scaffold24543 |
43704 |
44689 |
- |
RS1496 |
Unspecified |
| scaffold24543 |
45154 |
45547 |
+ |
RS658 |
Unspecified |
| scaffold24543 |
45548 |
45995 |
- |
RS1415 |
Unspecified |
| scaffold24543 |
46005 |
46631 |
- |
L1-1_PTr |
LINE/L1 |
| scaffold24543 |
49077 |
49215 |
+ |
RS17890 |
Unspecified |
| scaffold24543 |
49237 |
49411 |
+ |
RS934 |
Unspecified |
| scaffold24543 |
49272 |
49426 |
+ |
RS2713 |
Unspecified |
| scaffold24543 |
50242 |
50314 |
+ |
(TTGTT)n |
Simple_repeat |
| scaffold24543 |
50870 |
50896 |
+ |
(TG)n |
Simple_repeat |
| scaffold24543 |
51790 |
51820 |
+ |
(AGATGA)n |
Simple_repeat |
| scaffold24543 |
51998 |
52047 |
+ |
(AAC)n |
Simple_repeat |
| scaffold24543 |
52060 |
52657 |
- |
RS658 |
Unspecified |
| scaffold24543 |
52662 |
52800 |
+ |
RS17890 |
Unspecified |
| scaffold24543 |
53024 |
53441 |
+ |
RS1447 |
Unspecified |
| scaffold24543 |
53442 |
53652 |
+ |
RS1447 |
Unspecified |
| scaffold24543 |
53450 |
53744 |
+ |
RS11444 |
Unspecified |
| scaffold24543 |
54260 |
54305 |
+ |
(CGTGTC)n |
Simple_repeat |
| scaffold24543 |
54641 |
54701 |
+ |
(GTTTTC)n |
Simple_repeat |
| scaffold24543 |
55107 |
55387 |
+ |
PL834 |
Unspecified |
| scaffold24543 |
55926 |
55997 |
- |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold24543 |
56640 |
58060 |
- |
Copia-10_BD-I |
LTR/Copia |
| scaffold24543 |
58225 |
58422 |
- |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold24543 |
59246 |
59719 |
- |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold24543 |
59712 |
60019 |
- |
PL956 |
Unspecified |
| scaffold24543 |
60723 |
61880 |
- |
PL956 |
Unspecified |