scaffold24568 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold24568 |
317 |
387 |
+ |
A-rich |
Low_complexity |
| scaffold24568 |
1291 |
2832 |
- |
Copia-30-I_VV |
LTR/Copia |
| scaffold24568 |
3293 |
3843 |
- |
Copia-30-I_VV |
LTR/Copia |
| scaffold24568 |
3844 |
3940 |
- |
RS6349 |
Unspecified |
| scaffold24568 |
4036 |
4327 |
+ |
RS9797 |
Unspecified |
| scaffold24568 |
4381 |
4440 |
+ |
(GTAGA)n |
Simple_repeat |
| scaffold24568 |
4961 |
4987 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold24568 |
5153 |
5184 |
+ |
(TTTAG)n |
Simple_repeat |
| scaffold24568 |
6620 |
6657 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold24568 |
6773 |
6922 |
- |
RS1478 |
Unspecified |
| scaffold24568 |
6818 |
6939 |
- |
RS7462 |
Unspecified |
| scaffold24568 |
7007 |
7065 |
+ |
GA-rich |
Low_complexity |
| scaffold24568 |
7095 |
7176 |
+ |
(ACC)n |
Simple_repeat |
| scaffold24568 |
7195 |
7242 |
+ |
(CT)n |
Simple_repeat |
| scaffold24568 |
7903 |
8162 |
- |
RS15876 |
Unspecified |
| scaffold24568 |
8481 |
8518 |
+ |
(A)n |
Simple_repeat |
| scaffold24568 |
8803 |
9094 |
+ |
RS9797 |
Unspecified |
| scaffold24568 |
13654 |
13854 |
+ |
RS60 |
Unspecified |
| scaffold24568 |
14411 |
14514 |
- |
RS4475 |
Unspecified |
| scaffold24568 |
14910 |
15251 |
+ |
RS42 |
Unspecified |
| scaffold24568 |
16704 |
16786 |
+ |
(GACCC)n |
Simple_repeat |
| scaffold24568 |
17337 |
17410 |
+ |
(TTATTG)n |
Simple_repeat |
| scaffold24568 |
21159 |
21175 |
+ |
(A)n |
Simple_repeat |
| scaffold24568 |
22695 |
22762 |
- |
RS18111 |
Unspecified |
| scaffold24568 |
23383 |
23407 |
+ |
(T)n |
Simple_repeat |
| scaffold24568 |
23775 |
23799 |
+ |
(A)n |
Simple_repeat |
| scaffold24568 |
24698 |
24730 |
+ |
(T)n |
Simple_repeat |
| scaffold24568 |
24743 |
24776 |
+ |
(GTATCG)n |
Simple_repeat |
| scaffold24568 |
25202 |
25242 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold24568 |
26268 |
26397 |
- |
RS178 |
Unspecified |
| scaffold24568 |
26492 |
26608 |
- |
RS972 |
Unspecified |
| scaffold24568 |
26759 |
26804 |
+ |
A-rich |
Low_complexity |
| scaffold24568 |
27785 |
27880 |
- |
PL754 |
Unspecified |
| scaffold24568 |
28067 |
28084 |
+ |
(T)n |
Simple_repeat |
| scaffold24568 |
28251 |
28448 |
- |
RS757 |
Unspecified |
| scaffold24568 |
28283 |
28492 |
+ |
RS13348 |
Unspecified |
| scaffold24568 |
28662 |
28837 |
+ |
RS5 |
Unspecified |
| scaffold24568 |
28933 |
28972 |
+ |
(TAA)n |
Simple_repeat |
| scaffold24568 |
28970 |
29242 |
- |
RS17600 |
Unspecified |
| scaffold24568 |
29196 |
29248 |
+ |
RS17600 |
Unspecified |
| scaffold24568 |
30191 |
30453 |
- |
RS829 |
Unspecified |
| scaffold24568 |
30191 |
30400 |
+ |
RS1186 |
Unspecified |
| scaffold24568 |
30388 |
31127 |
- |
RS2463 |
Unspecified |
| scaffold24568 |
31056 |
31214 |
- |
RS15364 |
Unspecified |
| scaffold24568 |
31082 |
31315 |
+ |
RS1186 |
Unspecified |
| scaffold24568 |
31806 |
32028 |
+ |
PL288 |
Unspecified |
| scaffold24568 |
32035 |
32133 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold24568 |
33808 |
33844 |
+ |
A-rich |
Low_complexity |
| scaffold24568 |
33998 |
34031 |
+ |
(A)n |
Simple_repeat |
| scaffold24568 |
34605 |
34674 |
+ |
(TAA)n |
Simple_repeat |
| scaffold24568 |
34676 |
35135 |
+ |
(TAA)n |
Simple_repeat |
| scaffold24568 |
35117 |
35135 |
+ |
(TAA)n |
Simple_repeat |
| scaffold24568 |
35381 |
35682 |
- |
RS580 |
Unspecified |
| scaffold24568 |
36201 |
36273 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold24568 |
36274 |
36325 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold24568 |
36810 |
36981 |
- |
RS1115 |
Unspecified |
| scaffold24568 |
37154 |
37198 |
+ |
(CACCAA)n |
Simple_repeat |
| scaffold24568 |
38136 |
38172 |
+ |
(TAATT)n |
Simple_repeat |
| scaffold24568 |
38390 |
38415 |
+ |
(CCA)n |
Simple_repeat |
| scaffold24568 |
38629 |
38752 |
+ |
RS7520 |
Unspecified |
| scaffold24568 |
38772 |
38916 |
+ |
RS5048 |
Unspecified |
| scaffold24568 |
38944 |
39149 |
+ |
PL375 |
Unspecified |
| scaffold24568 |
39634 |
39655 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold24568 |
39656 |
39696 |
+ |
(TTA)n |
Simple_repeat |
| scaffold24568 |
40609 |
40758 |
+ |
RS324 |
Unspecified |
| scaffold24568 |
41195 |
41223 |
+ |
A-rich |
Low_complexity |
| scaffold24568 |
43889 |
43945 |
- |
RS726 |
Unspecified |
| scaffold24568 |
43966 |
44278 |
+ |
RS15463 |
Unspecified |
| scaffold24568 |
44449 |
44529 |
+ |
RS4475 |
Unspecified |
| scaffold24568 |
45013 |
45063 |
+ |
A-rich |
Low_complexity |
| scaffold24568 |
47319 |
47404 |
+ |
(AGCTCG)n |
Simple_repeat |
| scaffold24568 |
48089 |
48264 |
- |
RS43 |
Unspecified |
| scaffold24568 |
48385 |
48420 |
+ |
(AGATT)n |
Simple_repeat |
| scaffold24568 |
48742 |
49169 |
+ |
RS922 |
Unspecified |
| scaffold24568 |
49726 |
49748 |
+ |
(T)n |
Simple_repeat |
| scaffold24568 |
50285 |
50326 |
+ |
(TAT)n |
Simple_repeat |
| scaffold24568 |
50487 |
50516 |
+ |
(CATTTT)n |
Simple_repeat |
| scaffold24568 |
51494 |
51519 |
+ |
(A)n |
Simple_repeat |
| scaffold24568 |
51520 |
51538 |
+ |
A-rich |
Low_complexity |
| scaffold24568 |
51657 |
51682 |
+ |
(T)n |
Simple_repeat |
| scaffold24568 |
52400 |
52538 |
- |
RS1695 |
Unspecified |
| scaffold24568 |
55136 |
55219 |
+ |
(TT)n |
Simple_repeat |
| scaffold24568 |
55234 |
55327 |
+ |
RS16382 |
Unspecified |
| scaffold24568 |
56082 |
56375 |
+ |
RS1746 |
Unspecified |
| scaffold24568 |
56150 |
56447 |
- |
RS1746 |
Unspecified |
| scaffold24568 |
56477 |
56507 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold24568 |
56505 |
56591 |
- |
RS4475 |
Unspecified |
| scaffold24568 |
56851 |
56872 |
+ |
(T)n |
Simple_repeat |
| scaffold24568 |
57226 |
57275 |
+ |
A-rich |
Low_complexity |
| scaffold24568 |
57752 |
57793 |
+ |
(TGTTGC)n |
Simple_repeat |
| scaffold24568 |
58757 |
58781 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold24568 |
59143 |
59193 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold24568 |
59723 |
59747 |
+ |
(T)n |
Simple_repeat |
| scaffold24568 |
59874 |
60109 |
+ |
RS15131 |
Unspecified |
| scaffold24568 |
60379 |
60404 |
+ |
(TCAAA)n |
Simple_repeat |
| scaffold24568 |
60849 |
61236 |
+ |
PL744 |
Unspecified |
| scaffold24568 |
61235 |
61401 |
- |
RS17700 |
Unspecified |
| scaffold24568 |
61402 |
61787 |
- |
PL744 |
Unspecified |
| scaffold24568 |
61958 |
62088 |
- |
RS3665 |
Unspecified |
| scaffold24568 |
63077 |
63140 |
- |
LT1_EPa |
LTR? |
| scaffold24568 |
63087 |
63176 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold24568 |
63505 |
63595 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold24568 |
63851 |
63975 |
+ |
RS170 |
Unspecified |
| scaffold24568 |
64185 |
64812 |
+ |
PL413 |
Unspecified |
| scaffold24568 |
65039 |
65060 |
+ |
(T)n |
Simple_repeat |
| scaffold24568 |
65161 |
65191 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold24568 |
65675 |
65707 |
+ |
(TTCA)n |
Simple_repeat |
| scaffold24568 |
65716 |
65786 |
+ |
(TTA)n |
Simple_repeat |
| scaffold24568 |
65785 |
65878 |
- |
RS16382 |
Unspecified |
| scaffold24568 |
65875 |
65932 |
+ |
(ATT)n |
Simple_repeat |
| scaffold24568 |
66966 |
66985 |
+ |
(A)n |
Simple_repeat |
| scaffold24568 |
68153 |
68243 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold24568 |
68526 |
68575 |
- |
RS54 |
Unspecified |
| scaffold24568 |
68670 |
68926 |
- |
RS17600 |
Unspecified |
| scaffold24568 |
69276 |
69458 |
- |
RS178 |
Unspecified |
| scaffold24568 |
70403 |
70792 |
+ |
RS29 |
Unspecified |
| scaffold24568 |
71488 |
71505 |
+ |
(AT)n |
Simple_repeat |
| scaffold24568 |
71733 |
71997 |
+ |
RS356 |
Unspecified |
| scaffold24568 |
72475 |
72574 |
- |
RS16382 |
Unspecified |
| scaffold24568 |
73314 |
73332 |
+ |
(T)n |
Simple_repeat |
| scaffold24568 |
74427 |
74460 |
+ |
A-rich |
Low_complexity |
| scaffold24568 |
74754 |
74837 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold24568 |
75061 |
75103 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold24568 |
75104 |
75127 |
+ |
(A)n |
Simple_repeat |
| scaffold24568 |
75128 |
75134 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold24568 |
75530 |
75849 |
+ |
RS210 |
Unspecified |
| scaffold24568 |
76092 |
76115 |
+ |
(T)n |
Simple_repeat |
| scaffold24568 |
76998 |
77044 |
+ |
A-rich |
Low_complexity |
| scaffold24568 |
77199 |
77251 |
+ |
A-rich |
Low_complexity |
| scaffold24568 |
77770 |
77932 |
+ |
RS376 |
Unspecified |
| scaffold24568 |
78246 |
78288 |
+ |
(TA)n |
Simple_repeat |
| scaffold24568 |
80870 |
80918 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold24568 |
82727 |
82767 |
+ |
(TTA)n |
Simple_repeat |
| scaffold24568 |
82892 |
82965 |
+ |
A-rich |
Low_complexity |
| scaffold24568 |
83105 |
83145 |
+ |
(TAATTT)n |
Simple_repeat |
| scaffold24568 |
83546 |
83568 |
+ |
(CATA)n |
Simple_repeat |
| scaffold24568 |
83895 |
83922 |
+ |
(T)n |
Simple_repeat |
| scaffold24568 |
84179 |
84321 |
- |
RS22 |
Unspecified |
| scaffold24568 |
84352 |
84460 |
+ |
(TGAAC)n |
Simple_repeat |
| scaffold24568 |
84495 |
84609 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold24568 |
84837 |
85039 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold24568 |
85146 |
85303 |
- |
RS240 |
Unspecified |
| scaffold24568 |
87319 |
87341 |
+ |
(T)n |
Simple_repeat |
| scaffold24568 |
87702 |
87843 |
- |
RS54 |
Unspecified |
| scaffold24568 |
88047 |
88095 |
+ |
A-rich |
Low_complexity |
| scaffold24568 |
88765 |
88825 |
+ |
PIGY-I_PS |
LTR/Gypsy |
| scaffold24568 |
89825 |
90035 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold24568 |
90036 |
90110 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold24568 |
90551 |
90656 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold24568 |
92162 |
92276 |
- |
RS5853 |
Unspecified |
| scaffold24568 |
93296 |
93305 |
+ |
(CATAAT)n |
Simple_repeat |
| scaffold24568 |
93306 |
93341 |
+ |
(ATCA)n |
Simple_repeat |
| scaffold24568 |
93342 |
93383 |
+ |
A-rich |
Low_complexity |
| scaffold24568 |
93456 |
93507 |
+ |
(CTT)n |
Simple_repeat |
| scaffold24568 |
94713 |
94719 |
+ |
(TGATT)n |
Simple_repeat |
| scaffold24568 |
94720 |
94764 |
+ |
(TGTT)n |
Simple_repeat |
| scaffold24568 |
94765 |
94781 |
+ |
(TGATT)n |
Simple_repeat |
| scaffold24568 |
100669 |
100722 |
+ |
(TGAATTGAAC)n |
Simple_repeat |
| scaffold24568 |
100917 |
100938 |
+ |
(A)n |
Simple_repeat |
| scaffold24568 |
101125 |
101170 |
+ |
(TAA)n |
Simple_repeat |
| scaffold24568 |
104409 |
104430 |
+ |
(A)n |
Simple_repeat |
| scaffold24568 |
105609 |
105735 |
- |
RS17262 |
Unspecified |
| scaffold24568 |
105812 |
105833 |
+ |
(A)n |
Simple_repeat |
| scaffold24568 |
106438 |
106477 |
+ |
(TT)n |
Simple_repeat |
| scaffold24568 |
106506 |
106694 |
- |
EnSpm2_TM |
DNA/CMC-EnSpm |
| scaffold24568 |
107163 |
107226 |
+ |
(ACA)n |
Simple_repeat |
| scaffold24568 |
107255 |
107277 |
+ |
(TCT)n |
Simple_repeat |
| scaffold24568 |
107401 |
107428 |
+ |
(CT)n |
Simple_repeat |
| scaffold24568 |
107640 |
107669 |
+ |
(T)n |
Simple_repeat |
| scaffold24568 |
107894 |
107912 |
+ |
(T)n |
Simple_repeat |
| scaffold24568 |
109046 |
109073 |
+ |
(T)n |
Simple_repeat |
| scaffold24568 |
113537 |
113555 |
+ |
(ATC)n |
Simple_repeat |
| scaffold24568 |
114647 |
114677 |
+ |
(T)n |
Simple_repeat |
| scaffold24568 |
115610 |
115697 |
- |
RS1847 |
Unspecified |
| scaffold24568 |
116225 |
116317 |
+ |
A-rich |
Low_complexity |
| scaffold24568 |
116676 |
116693 |
+ |
(A)n |
Simple_repeat |
| scaffold24568 |
117851 |
117902 |
+ |
A-rich |
Low_complexity |
| scaffold24568 |
119115 |
119214 |
- |
RS1323 |
Unspecified |
| scaffold24568 |
119115 |
119229 |
- |
RS1323 |
Unspecified |
| scaffold24568 |
119151 |
119227 |
- |
RS1323 |
Unspecified |
| scaffold24568 |
120064 |
120111 |
+ |
(CAA)n |
Simple_repeat |
| scaffold24568 |
120747 |
120818 |
+ |
(ACATTCA)n |
Simple_repeat |
| scaffold24568 |
120839 |
120903 |
+ |
A-rich |
Low_complexity |
| scaffold24568 |
121056 |
121112 |
+ |
A-rich |
Low_complexity |
| scaffold24568 |
121358 |
121389 |
+ |
(TGAA)n |
Simple_repeat |
| scaffold24568 |
122731 |
122814 |
- |
RS1062 |
Unspecified |
| scaffold24568 |
122742 |
122900 |
+ |
RS620 |
Unspecified |
| scaffold24568 |
122800 |
123001 |
- |
RS1062 |
Unspecified |
| scaffold24568 |
123447 |
123475 |
+ |
(TATAT)n |
Simple_repeat |
| scaffold24568 |
125181 |
125238 |
- |
STOWAWAY2_SB |
DNA/TcMar-Stowaway |
| scaffold24568 |
126281 |
126325 |
+ |
(GTTCA)n |
Simple_repeat |
| scaffold24568 |
126360 |
126427 |
+ |
RS17105 |
Unspecified |
| scaffold24568 |
126857 |
126908 |
+ |
(TGG)n |
Simple_repeat |
| scaffold24568 |
126974 |
127019 |
+ |
(GTG)n |
Simple_repeat |
| scaffold24568 |
127034 |
127055 |
+ |
(TG)n |
Simple_repeat |
| scaffold24568 |
127514 |
127554 |
+ |
(TATATGAG)n |
Simple_repeat |
| scaffold24568 |
127789 |
127806 |
+ |
(A)n |
Simple_repeat |
| scaffold24568 |
129772 |
129816 |
+ |
(A)n |
Simple_repeat |
| scaffold24568 |
130888 |
130908 |
+ |
(A)n |
Simple_repeat |
| scaffold24568 |
135096 |
135132 |
+ |
(TTGAC)n |
Simple_repeat |
| scaffold24568 |
135322 |
135366 |
- |
RS34 |
Unspecified |
| scaffold24568 |
135363 |
135398 |
+ |
RS677 |
Unspecified |
| scaffold24568 |
135730 |
135761 |
+ |
(ATTAAAT)n |
Simple_repeat |
| scaffold24568 |
135772 |
135798 |
+ |
(A)n |
Simple_repeat |
| scaffold24568 |
135937 |
136045 |
- |
RS439 |
Unspecified |
| scaffold24568 |
137537 |
137873 |
- |
PL171 |
Unspecified |
| scaffold24568 |
137852 |
137937 |
+ |
PL753 |
Unspecified |
| scaffold24568 |
137863 |
137937 |
- |
PL753 |
Unspecified |
| scaffold24568 |
137966 |
138018 |
+ |
(TA)n |
Simple_repeat |
| scaffold24568 |
138485 |
138787 |
+ |
RS518 |
Unspecified |
| scaffold24568 |
139722 |
139773 |
+ |
A-rich |
Low_complexity |
| scaffold24568 |
141130 |
141181 |
+ |
(T)n |
Simple_repeat |
| scaffold24568 |
142434 |
142477 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold24568 |
142626 |
142678 |
+ |
A-rich |
Low_complexity |
| scaffold24568 |
143628 |
143856 |
- |
RS123 |
Unspecified |
| scaffold24568 |
143874 |
144065 |
+ |
(ACTTG)n |
Simple_repeat |
| scaffold24568 |
144100 |
144181 |
- |
RS34 |
Unspecified |
| scaffold24568 |
144501 |
144532 |
+ |
(ATTAAAT)n |
Simple_repeat |
| scaffold24568 |
144697 |
144797 |
- |
RS439 |
Unspecified |
| scaffold24568 |
146248 |
146299 |
+ |
(AATTA)n |
Simple_repeat |
| scaffold24568 |
146298 |
147074 |
+ |
PL470 |
Unspecified |
| scaffold24568 |
147352 |
147421 |
- |
RS1746 |
Unspecified |
| scaffold24568 |
148866 |
148920 |
+ |
RLG_scMaximus_1_5-I |
LTR/Copia |
| scaffold24568 |
149415 |
149576 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold24568 |
149477 |
149576 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold24568 |
151123 |
151164 |
- |
PL517 |
Unspecified |
| scaffold24568 |
151142 |
151194 |
- |
PL517 |
Unspecified |
| scaffold24568 |
151602 |
151633 |
+ |
(TAA)n |
Simple_repeat |
| scaffold24568 |
152771 |
152973 |
- |
PL700 |
Unspecified |
| scaffold24568 |
153654 |
153755 |
- |
RS16382 |
Unspecified |
| scaffold24568 |
155426 |
155459 |
+ |
(TA)n |
Simple_repeat |
| scaffold24568 |
156321 |
156344 |
+ |
(A)n |
Simple_repeat |
| scaffold24568 |
158152 |
158393 |
+ |
PL637 |
Unspecified |
| scaffold24568 |
158469 |
158653 |
+ |
PL637 |
Unspecified |
| scaffold24568 |
159310 |
159346 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold24568 |
163265 |
163308 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold24568 |
164277 |
164359 |
- |
PL517 |
Unspecified |
| scaffold24568 |
164461 |
164559 |
- |
RS4475 |
Unspecified |
| scaffold24568 |
165013 |
165225 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold24568 |
165226 |
165296 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold24568 |
166700 |
166842 |
+ |
RS908 |
Unspecified |
| scaffold24568 |
168374 |
168406 |
+ |
(GACAGT)n |
Simple_repeat |
| scaffold24568 |
168616 |
168653 |
+ |
(ATCATGT)n |
Simple_repeat |
| scaffold24568 |
172199 |
172215 |
+ |
(A)n |
Simple_repeat |
| scaffold24568 |
172430 |
172487 |
+ |
(GAGTACG)n |
Simple_repeat |
| scaffold24568 |
172492 |
172583 |
+ |
(A)n |
Simple_repeat |
| scaffold24568 |
172714 |
172812 |
- |
RS4475 |
Unspecified |
| scaffold24568 |
173127 |
173173 |
- |
RS429 |
Unspecified |
| scaffold24568 |
173130 |
173180 |
+ |
RS16799 |
Unspecified |
| scaffold24568 |
173455 |
173471 |
+ |
(A)n |
Simple_repeat |
| scaffold24568 |
173521 |
173544 |
+ |
(A)n |
Simple_repeat |
| scaffold24568 |
173711 |
173789 |
+ |
(AATTAAT)n |
Simple_repeat |
| scaffold24568 |
173852 |
173913 |
- |
RS429 |
Unspecified |
| scaffold24568 |
174239 |
174263 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold24568 |
174902 |
174929 |
+ |
(CAATC)n |
Simple_repeat |
| scaffold24568 |
175139 |
175276 |
+ |
RS13085 |
Unspecified |
| scaffold24568 |
175640 |
175847 |
+ |
RS86 |
Unspecified |
| scaffold24568 |
176125 |
176160 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold24568 |
177591 |
177684 |
+ |
(A)n |
Simple_repeat |
| scaffold24568 |
179451 |
179501 |
+ |
A-rich |
Low_complexity |
| scaffold24568 |
179629 |
179723 |
+ |
RS4475 |
Unspecified |
| scaffold24568 |
180741 |
180904 |
+ |
RS1903 |
Unspecified |
| scaffold24568 |
180902 |
181642 |
- |
Copia-82_GM-I |
LTR/Copia |
| scaffold24568 |
181663 |
181826 |
+ |
RS1903 |
Unspecified |
| scaffold24568 |
182126 |
182220 |
+ |
RS15113 |
Unspecified |
| scaffold24568 |
182988 |
183043 |
+ |
(A)n |
Simple_repeat |
| scaffold24568 |
183058 |
183221 |
- |
RS16588 |
Unspecified |
| scaffold24568 |
184386 |
184438 |
+ |
A-rich |
Low_complexity |
| scaffold24568 |
184746 |
184776 |
+ |
(CGGCGA)n |
Simple_repeat |
| scaffold24568 |
184777 |
184791 |
+ |
(CGCCGA)n |
Simple_repeat |
| scaffold24568 |
185556 |
185616 |
+ |
A-rich |
Low_complexity |
| scaffold24568 |
186603 |
186655 |
+ |
RS18361 |
Unspecified |
| scaffold24568 |
186610 |
186847 |
+ |
RS581 |
Unspecified |
| scaffold24568 |
187228 |
187333 |
+ |
RS17860 |
Unspecified |
| scaffold24568 |
188915 |
188969 |
+ |
(TTTGTTT)n |
Simple_repeat |
| scaffold24568 |
189483 |
189781 |
+ |
RS4449 |
Unspecified |
| scaffold24568 |
190534 |
190583 |
+ |
A-rich |
Low_complexity |
| scaffold24568 |
191024 |
191268 |
- |
RS41 |
Unspecified |
| scaffold24568 |
191139 |
191285 |
+ |
RS17211 |
Unspecified |
| scaffold24568 |
191481 |
191553 |
+ |
tRNASAT-1_ZM |
Satellite |
| scaffold24568 |
191554 |
191596 |
+ |
(T)n |
Simple_repeat |
| scaffold24568 |
191625 |
191648 |
+ |
(T)n |
Simple_repeat |
| scaffold24568 |
196692 |
196773 |
+ |
A-rich |
Low_complexity |
| scaffold24568 |
197369 |
197398 |
+ |
(TAA)n |
Simple_repeat |
| scaffold24568 |
201215 |
201231 |
+ |
(A)n |
Simple_repeat |
| scaffold24568 |
203016 |
203047 |
+ |
A-rich |
Low_complexity |
| scaffold24568 |
203603 |
203644 |
+ |
(TAA)n |
Simple_repeat |
| scaffold24568 |
204658 |
204728 |
- |
RS580 |
Unspecified |
| scaffold24568 |
205282 |
205299 |
+ |
(A)n |
Simple_repeat |
| scaffold24568 |
205317 |
205413 |
- |
RS6556 |
Unspecified |
| scaffold24568 |
205668 |
206225 |
- |
PL782 |
Unspecified |
| scaffold24568 |
206223 |
206265 |
+ |
(TAA)n |
Simple_repeat |
| scaffold24568 |
206477 |
206565 |
- |
HADES_TA |
DNA/TcMar-Stowaway |
| scaffold24568 |
213505 |
213554 |
+ |
A-rich |
Low_complexity |
| scaffold24568 |
213653 |
213680 |
+ |
(T)n |
Simple_repeat |
| scaffold24568 |
214260 |
214312 |
+ |
RS2827 |
Unspecified |
| scaffold24568 |
214341 |
214365 |
+ |
(CTCCT)n |
Simple_repeat |
| scaffold24568 |
214607 |
214650 |
+ |
(TTGTTT)n |
Simple_repeat |
| scaffold24568 |
214737 |
214796 |
+ |
(T)n |
Simple_repeat |
| scaffold24568 |
215287 |
215314 |
+ |
(ATAAT)n |
Simple_repeat |
| scaffold24568 |
215427 |
215460 |
+ |
(A)n |
Simple_repeat |
| scaffold24568 |
215524 |
215909 |
- |
PL315 |
Unspecified |
| scaffold24568 |
215988 |
216409 |
+ |
RS6405 |
Unspecified |
| scaffold24568 |
216421 |
216469 |
+ |
(TTTTTT)n |
Simple_repeat |
| scaffold24568 |
216754 |
217066 |
+ |
RS1716 |
Unspecified |
| scaffold24568 |
217208 |
217285 |
- |
RS10491 |
Unspecified |
| scaffold24568 |
219856 |
219920 |
- |
Gypsy-112_GM-I |
LTR/Gypsy |
| scaffold24568 |
222424 |
222437 |
+ |
A-rich |
Low_complexity |
| scaffold24568 |
222438 |
222478 |
+ |
(ATTTA)n |
Simple_repeat |
| scaffold24568 |
222479 |
222490 |
+ |
A-rich |
Low_complexity |
| scaffold24568 |
223036 |
223088 |
+ |
(TTGGTG)n |
Simple_repeat |
| scaffold24568 |
224081 |
224124 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold24568 |
224430 |
224614 |
- |
RS371 |
Unspecified |
| scaffold24568 |
224629 |
224653 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold24568 |
225408 |
225506 |
- |
PL87 |
Unspecified |
| scaffold24568 |
225505 |
225594 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold24568 |
229807 |
229923 |
+ |
(TGG)n |
Simple_repeat |
| scaffold24568 |
230031 |
230067 |
+ |
A-rich |
Low_complexity |
| scaffold24568 |
230846 |
230882 |
+ |
(ACTATT)n |
Simple_repeat |
| scaffold24568 |
230883 |
230906 |
+ |
(TAT)n |
Simple_repeat |
| scaffold24568 |
231532 |
231566 |
+ |
(TATG)n |
Simple_repeat |
| scaffold24568 |
231986 |
232004 |
+ |
(TTA)n |
Simple_repeat |
| scaffold24568 |
232789 |
232828 |
+ |
(ATTTTC)n |
Simple_repeat |
| scaffold24568 |
233004 |
233263 |
+ |
RS138 |
Unspecified |
| scaffold24568 |
239564 |
239785 |
+ |
(GTG)n |
Simple_repeat |
| scaffold24568 |
239878 |
239921 |
+ |
(ATA)n |
Simple_repeat |
| scaffold24568 |
240042 |
240070 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold24568 |
240503 |
240767 |
- |
RS356 |
Unspecified |
| scaffold24568 |
242159 |
242187 |
+ |
(T)n |
Simple_repeat |
| scaffold24568 |
242333 |
242366 |
+ |
(ATTGTA)n |
Simple_repeat |
| scaffold24568 |
242367 |
242389 |
+ |
(TATT)n |
Simple_repeat |
| scaffold24568 |
243651 |
243689 |
+ |
(TTTGACA)n |
Simple_repeat |
| scaffold24568 |
244272 |
244304 |
+ |
(TCAAT)n |
Simple_repeat |
| scaffold24568 |
245409 |
245488 |
+ |
(ATATTAA)n |
Simple_repeat |
| scaffold24568 |
246253 |
246520 |
+ |
RS454 |
Unspecified |
| scaffold24568 |
246932 |
246967 |
+ |
(T)n |
Simple_repeat |
| scaffold24568 |
247103 |
247214 |
+ |
(TTTTAA)n |
Simple_repeat |
| scaffold24568 |
247228 |
247499 |
- |
RS1868 |
Unspecified |
| scaffold24568 |
247229 |
247442 |
+ |
RS556 |
Unspecified |
| scaffold24568 |
247824 |
248030 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold24568 |
247946 |
248041 |
+ |
(AGCTG)n |
Simple_repeat |
| scaffold24568 |
248470 |
248634 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold24568 |
248672 |
248720 |
+ |
Gypsy69-ZM_I-int |
LTR/Gypsy |
| scaffold24568 |
248877 |
249009 |
- |
RS15470 |
Unspecified |
| scaffold24568 |
249147 |
249174 |
+ |
(T)n |
Simple_repeat |
| scaffold24568 |
250205 |
250338 |
+ |
RS18 |
Unspecified |
| scaffold24568 |
250382 |
250476 |
+ |
RS1974 |
Unspecified |
| scaffold24568 |
251215 |
251309 |
+ |
RS18078 |
Unspecified |
| scaffold24568 |
251838 |
251862 |
+ |
(AT)n |
Simple_repeat |
| scaffold24568 |
252130 |
252172 |
+ |
A-rich |
Low_complexity |
| scaffold24568 |
253007 |
253040 |
+ |
(GGT)n |
Simple_repeat |
| scaffold24568 |
253046 |
253075 |
+ |
(ACC)n |
Simple_repeat |
| scaffold24568 |
253619 |
253656 |
+ |
(TGTGTAA)n |
Simple_repeat |
| scaffold24568 |
253839 |
253901 |
+ |
(ATA)n |
Simple_repeat |
| scaffold24568 |
254984 |
255099 |
+ |
RS17262 |
Unspecified |
| scaffold24568 |
255367 |
255488 |
- |
RS748 |
Unspecified |
| scaffold24568 |
255386 |
255616 |
+ |
RS898 |
Unspecified |
| scaffold24568 |
256492 |
256585 |
+ |
(TTCAGAAAAC)n |
Simple_repeat |
| scaffold24568 |
256610 |
256864 |
- |
PL298 |
Unspecified |
| scaffold24568 |
257192 |
257302 |
+ |
(AAAACTTCAG)n |
Simple_repeat |
| scaffold24568 |
257615 |
257668 |
+ |
(AAATT)n |
Simple_repeat |
| scaffold24568 |
258201 |
258377 |
+ |
RS371 |
Unspecified |
| scaffold24568 |
258698 |
258746 |
+ |
(TTCGTT)n |
Simple_repeat |
| scaffold24568 |
259059 |
259087 |
+ |
A-rich |
Low_complexity |
| scaffold24568 |
259380 |
259753 |
+ |
RS8 |
Unspecified |
| scaffold24568 |
259694 |
259768 |
+ |
RS14205 |
Unspecified |
| scaffold24568 |
263846 |
263862 |
+ |
(T)n |
Simple_repeat |
| scaffold24568 |
264228 |
264244 |
+ |
(A)n |
Simple_repeat |
| scaffold24568 |
266884 |
266910 |
+ |
(ACCCC)n |
Simple_repeat |
| scaffold24568 |
267519 |
267567 |
+ |
GA-rich |
Low_complexity |
| scaffold24568 |
267589 |
267688 |
+ |
(GGT)n |
Simple_repeat |
| scaffold24568 |
268784 |
268815 |
+ |
(A)n |
Simple_repeat |
| scaffold24568 |
269185 |
269276 |
+ |
(TTGAA)n |
Simple_repeat |
| scaffold24568 |
275809 |
276170 |
+ |
RS8 |
Unspecified |
| scaffold24568 |
276164 |
276285 |
- |
PL754 |
Unspecified |
| scaffold24568 |
276796 |
276870 |
+ |
(AATT)n |
Simple_repeat |
| scaffold24568 |
277386 |
277491 |
- |
RS13929 |
Unspecified |
| scaffold24568 |
277701 |
277831 |
- |
RS9844 |
Unspecified |
| scaffold24568 |
278527 |
278641 |
- |
PL592 |
Unspecified |
| scaffold24568 |
278561 |
279241 |
- |
RS767 |
Unspecified |
| scaffold24568 |
279283 |
279336 |
- |
RS4329 |
Unspecified |
| scaffold24568 |
279333 |
279491 |
- |
RS4329 |
Unspecified |
| scaffold24568 |
279498 |
279538 |
+ |
(GTATTT)n |
Simple_repeat |
| scaffold24568 |
279966 |
280001 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold24568 |
280362 |
280389 |
+ |
(T)n |
Simple_repeat |
| scaffold24568 |
280811 |
280866 |
+ |
(TAT)n |
Simple_repeat |
| scaffold24568 |
284510 |
284610 |
+ |
RS11060 |
Unspecified |
| scaffold24568 |
286425 |
286886 |
+ |
PL178 |
Unspecified |
| scaffold24568 |
287493 |
287517 |
+ |
(T)n |
Simple_repeat |
| scaffold24568 |
287809 |
287825 |
+ |
(A)n |
Simple_repeat |
| scaffold24568 |
290093 |
290125 |
+ |
A-rich |
Low_complexity |
| scaffold24568 |
292140 |
292168 |
+ |
(A)n |
Simple_repeat |
| scaffold24568 |
293972 |
294072 |
+ |
PL11 |
Unspecified |
| scaffold24568 |
294262 |
294331 |
+ |
A-rich |
Low_complexity |
| scaffold24568 |
294285 |
294328 |
+ |
GA-rich |
Low_complexity |
| scaffold24568 |
295675 |
295702 |
+ |
(A)n |
Simple_repeat |
| scaffold24568 |
298192 |
298219 |
+ |
(ATA)n |
Simple_repeat |
| scaffold24568 |
298785 |
298816 |
+ |
(A)n |
Simple_repeat |
| scaffold24568 |
298867 |
299127 |
+ |
RS26 |
Unspecified |
| scaffold24568 |
299480 |
299515 |
+ |
(GAATT)n |
Simple_repeat |
| scaffold24568 |
300284 |
300324 |
+ |
(ATCA)n |
Simple_repeat |
| scaffold24568 |
300601 |
300690 |
- |
PL265 |
Unspecified |
| scaffold24568 |
300706 |
300792 |
- |
RS18316 |
Unspecified |
| scaffold24568 |
301077 |
301115 |
+ |
(TATTGTT)n |
Simple_repeat |
| scaffold24568 |
302138 |
302175 |
+ |
(ATAGT)n |
Simple_repeat |
| scaffold24568 |
302361 |
302416 |
+ |
RS17 |
Unspecified |
| scaffold24568 |
302813 |
302874 |
+ |
(TAATTA)n |
Simple_repeat |
| scaffold24568 |
303456 |
303522 |
+ |
A-rich |
Low_complexity |
| scaffold24568 |
303801 |
303835 |
+ |
(TATT)n |
Simple_repeat |
| scaffold24568 |
305148 |
305214 |
+ |
RS12449 |
Unspecified |
| scaffold24568 |
305628 |
305649 |
+ |
(GCG)n |
Simple_repeat |
| scaffold24568 |
306034 |
306140 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold24568 |
308505 |
308537 |
+ |
(TTTTC)n |
Simple_repeat |
| scaffold24568 |
309449 |
309484 |
+ |
(TTATTT)n |
Simple_repeat |
| scaffold24568 |
309519 |
309902 |
- |
RS539 |
Unspecified |
| scaffold24568 |
311062 |
311127 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold24568 |
311151 |
311184 |
+ |
(ATA)n |
Simple_repeat |
| scaffold24568 |
311290 |
311394 |
+ |
(AGCTTTC)n |
Simple_repeat |
| scaffold24568 |
312457 |
312669 |
- |
RS16888 |
Unspecified |
| scaffold24568 |
312696 |
312731 |
+ |
A-rich |
Low_complexity |
| scaffold24568 |
313022 |
313056 |
+ |
(T)n |
Simple_repeat |
| scaffold24568 |
314209 |
314249 |
+ |
A-rich |
Low_complexity |
| scaffold24568 |
319939 |
320018 |
- |
RS17 |
Unspecified |
| scaffold24568 |
320018 |
320118 |
+ |
RS908 |
Unspecified |
| scaffold24568 |
320037 |
320132 |
- |
RS1671 |
Unspecified |
| scaffold24568 |
320684 |
320720 |
+ |
(ACTCA)n |
Simple_repeat |
| scaffold24568 |
321043 |
321101 |
+ |
(AATTTG)n |
Simple_repeat |
| scaffold24568 |
321185 |
321222 |
+ |
(AATTTACA)n |
Simple_repeat |
| scaffold24568 |
321381 |
321559 |
- |
RS710 |
Unspecified |
| scaffold24568 |
321587 |
321642 |
+ |
(TAATT)n |
Simple_repeat |
| scaffold24568 |
322058 |
322155 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold24568 |
323707 |
323733 |
+ |
(ATTCA)n |
Simple_repeat |
| scaffold24568 |
323869 |
323956 |
+ |
(ATT)n |
Simple_repeat |
| scaffold24568 |
324894 |
324969 |
+ |
(AATTATG)n |
Simple_repeat |
| scaffold24568 |
324894 |
325158 |
+ |
(AATTATG)n |
Simple_repeat |