scaffold2479 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold2479 |
264 |
301 |
+ |
A-rich |
Low_complexity |
| scaffold2479 |
755 |
788 |
+ |
(GGACTA)n |
Simple_repeat |
| scaffold2479 |
1089 |
1286 |
+ |
RS936 |
Unspecified |
| scaffold2479 |
1261 |
1514 |
- |
RS247 |
Unspecified |
| scaffold2479 |
1527 |
1745 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold2479 |
1789 |
2088 |
+ |
RS703 |
Unspecified |
| scaffold2479 |
1965 |
3155 |
+ |
RS775 |
Unspecified |
| scaffold2479 |
3414 |
3512 |
- |
Copia-2_SL-I |
LTR/Copia |
| scaffold2479 |
4236 |
4562 |
+ |
RS637 |
Unspecified |
| scaffold2479 |
4563 |
4850 |
- |
PIGY-I_PS |
LTR/Gypsy |
| scaffold2479 |
5150 |
5224 |
+ |
(AATTGA)n |
Simple_repeat |
| scaffold2479 |
5366 |
5441 |
+ |
A-rich |
Low_complexity |
| scaffold2479 |
5533 |
5545 |
+ |
A-rich |
Low_complexity |
| scaffold2479 |
5546 |
5570 |
+ |
(A)n |
Simple_repeat |
| scaffold2479 |
5980 |
6021 |
+ |
A-rich |
Low_complexity |
| scaffold2479 |
6046 |
6309 |
+ |
RS356 |
Unspecified |
| scaffold2479 |
7241 |
7262 |
+ |
(A)n |
Simple_repeat |
| scaffold2479 |
7783 |
7823 |
+ |
(ATCATAA)n |
Simple_repeat |
| scaffold2479 |
8762 |
8782 |
+ |
(CCT)n |
Simple_repeat |
| scaffold2479 |
10496 |
10541 |
+ |
A-rich |
Low_complexity |
| scaffold2479 |
10692 |
10939 |
- |
RS581 |
Unspecified |
| scaffold2479 |
11269 |
11342 |
+ |
(TTCAGAAAAT)n |
Simple_repeat |
| scaffold2479 |
11355 |
11456 |
+ |
(AAT)n |
Simple_repeat |
| scaffold2479 |
11532 |
12098 |
+ |
PL188 |
Unspecified |
| scaffold2479 |
12091 |
12242 |
+ |
(AAT)n |
Simple_repeat |
| scaffold2479 |
12245 |
12515 |
- |
RS10 |
Unspecified |
| scaffold2479 |
12875 |
12919 |
+ |
A-rich |
Low_complexity |
| scaffold2479 |
12923 |
12951 |
+ |
(TAG)n |
Simple_repeat |
| scaffold2479 |
14345 |
14379 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold2479 |
14380 |
14478 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold2479 |
14479 |
14612 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold2479 |
14620 |
14887 |
+ |
RS970 |
Unspecified |
| scaffold2479 |
15901 |
16127 |
- |
RS549 |
Unspecified |
| scaffold2479 |
16248 |
16523 |
+ |
RS952 |
Unspecified |
| scaffold2479 |
17199 |
17229 |
+ |
(T)n |
Simple_repeat |
| scaffold2479 |
17703 |
17724 |
+ |
(T)n |
Simple_repeat |
| scaffold2479 |
18718 |
18770 |
+ |
(A)n |
Simple_repeat |
| scaffold2479 |
18875 |
19218 |
- |
PL2 |
Unspecified |
| scaffold2479 |
19874 |
19964 |
+ |
RS1010 |
Unspecified |
| scaffold2479 |
19901 |
20272 |
- |
RS1010 |
Unspecified |
| scaffold2479 |
20272 |
20325 |
+ |
(TAA)n |
Simple_repeat |
| scaffold2479 |
21066 |
21268 |
+ |
(TATT)n |
Simple_repeat |
| scaffold2479 |
21066 |
21096 |
+ |
(TATT)n |
Simple_repeat |
| scaffold2479 |
21085 |
21268 |
+ |
RS549 |
Unspecified |
| scaffold2479 |
21180 |
21282 |
+ |
RS18405 |
Unspecified |
| scaffold2479 |
22795 |
22839 |
+ |
(ATT)n |
Simple_repeat |
| scaffold2479 |
23103 |
23142 |
+ |
A-rich |
Low_complexity |
| scaffold2479 |
23654 |
23678 |
+ |
(T)n |
Simple_repeat |
| scaffold2479 |
23715 |
23910 |
- |
RS648 |
Unspecified |
| scaffold2479 |
23893 |
25084 |
- |
ATCopia28_I-int |
LTR/Copia |
| scaffold2479 |
25087 |
26738 |
- |
ATCopia28_I-int |
LTR/Copia |
| scaffold2479 |
26891 |
29113 |
- |
HATOS1 |
DNA/hAT-Tip100 |
| scaffold2479 |
30207 |
30240 |
+ |
(TATT)n |
Simple_repeat |
| scaffold2479 |
30334 |
31032 |
+ |
Copia-31_GM-I |
LTR/Copia |
| scaffold2479 |
30388 |
31132 |
+ |
Copia-31_GM-I |
LTR/Copia |
| scaffold2479 |
30388 |
31032 |
+ |
Copia-31_GM-I |
LTR/Copia |
| scaffold2479 |
31019 |
31132 |
+ |
RS18100 |
Unspecified |
| scaffold2479 |
33917 |
33977 |
+ |
PIGY-I_PS |
LTR/Gypsy |
| scaffold2479 |
33990 |
34177 |
- |
RS43 |
Unspecified |
| scaffold2479 |
34527 |
34583 |
+ |
(AATTAT)n |
Simple_repeat |
| scaffold2479 |
34756 |
34838 |
+ |
RS10 |
Unspecified |
| scaffold2479 |
34836 |
35280 |
+ |
PL654 |
Unspecified |
| scaffold2479 |
35852 |
35879 |
+ |
A-rich |
Low_complexity |
| scaffold2479 |
37265 |
37332 |
+ |
(AAT)n |
Simple_repeat |
| scaffold2479 |
37879 |
37913 |
+ |
(T)n |
Simple_repeat |
| scaffold2479 |
38169 |
38414 |
+ |
RS581 |
Unspecified |
| scaffold2479 |
38578 |
38612 |
+ |
A-rich |
Low_complexity |
| scaffold2479 |
39360 |
39540 |
- |
RS1347 |
Unspecified |
| scaffold2479 |
39626 |
39831 |
- |
RS18 |
Unspecified |
| scaffold2479 |
41339 |
41364 |
+ |
(GAAAA)n |
Simple_repeat |
| scaffold2479 |
42044 |
42230 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold2479 |
43467 |
43654 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold2479 |
43821 |
43981 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold2479 |
43982 |
44032 |
+ |
(TTGACCCGAC)n |
Simple_repeat |
| scaffold2479 |
44033 |
44056 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold2479 |
44587 |
44629 |
+ |
A-rich |
Low_complexity |
| scaffold2479 |
45499 |
45530 |
+ |
(AAC)n |
Simple_repeat |
| scaffold2479 |
45531 |
45566 |
+ |
(AAT)n |
Simple_repeat |
| scaffold2479 |
45982 |
46110 |
+ |
(TAATAT)n |
Simple_repeat |
| scaffold2479 |
46147 |
46333 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold2479 |
47304 |
47355 |
+ |
(AAT)n |
Simple_repeat |
| scaffold2479 |
47511 |
47608 |
+ |
A-rich |
Low_complexity |
| scaffold2479 |
47868 |
47912 |
+ |
(CCG)n |
Simple_repeat |
| scaffold2479 |
50511 |
50554 |
+ |
(ATG)n |
Simple_repeat |
| scaffold2479 |
51204 |
51274 |
+ |
RS1095 |
Unspecified |
| scaffold2479 |
51318 |
51737 |
+ |
PL100 |
Unspecified |
| scaffold2479 |
51811 |
51852 |
+ |
(CCGAC)n |
Simple_repeat |
| scaffold2479 |
52935 |
53194 |
- |
RS26 |
Unspecified |
| scaffold2479 |
53309 |
53513 |
+ |
RS5468 |
Unspecified |
| scaffold2479 |
53706 |
53753 |
+ |
A-rich |
Low_complexity |
| scaffold2479 |
54599 |
54730 |
+ |
RS4384 |
Unspecified |
| scaffold2479 |
54733 |
54777 |
+ |
A-rich |
Low_complexity |
| scaffold2479 |
54833 |
54856 |
+ |
(A)n |
Simple_repeat |
| scaffold2479 |
55131 |
55191 |
+ |
(CT)n |
Simple_repeat |
| scaffold2479 |
55218 |
55320 |
+ |
A-rich |
Low_complexity |
| scaffold2479 |
55416 |
55483 |
+ |
(CT)n |
Simple_repeat |
| scaffold2479 |
56038 |
56294 |
- |
RS140 |
Unspecified |
| scaffold2479 |
56343 |
56663 |
+ |
RS1935 |
Unspecified |
| scaffold2479 |
56712 |
57140 |
- |
RS140 |
Unspecified |
| scaffold2479 |
57025 |
57064 |
+ |
(TAATTAG)n |
Simple_repeat |
| scaffold2479 |
57220 |
57560 |
- |
PL400 |
Unspecified |
| scaffold2479 |
58721 |
58885 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |