scaffold25059 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold25059 |
1 |
120 |
+ |
PL741 |
Unspecified |
| scaffold25059 |
1080 |
1285 |
- |
RS559 |
Unspecified |
| scaffold25059 |
1293 |
1336 |
+ |
(T)n |
Simple_repeat |
| scaffold25059 |
1293 |
1590 |
+ |
(T)n |
Simple_repeat |
| scaffold25059 |
1326 |
1608 |
+ |
(A)n |
Simple_repeat |
| scaffold25059 |
1576 |
1608 |
+ |
(A)n |
Simple_repeat |
| scaffold25059 |
1665 |
1697 |
+ |
(A)n |
Simple_repeat |
| scaffold25059 |
1698 |
1753 |
+ |
RS460 |
Unspecified |
| scaffold25059 |
2294 |
2368 |
+ |
A-rich |
Low_complexity |
| scaffold25059 |
3461 |
3639 |
+ |
RS5 |
Unspecified |
| scaffold25059 |
3956 |
3978 |
+ |
(A)n |
Simple_repeat |
| scaffold25059 |
4171 |
4192 |
+ |
(A)n |
Simple_repeat |
| scaffold25059 |
4331 |
4410 |
+ |
(ATAGAT)n |
Simple_repeat |
| scaffold25059 |
4665 |
4688 |
+ |
(T)n |
Simple_repeat |
| scaffold25059 |
5250 |
5297 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold25059 |
6348 |
6385 |
+ |
(TCAG)n |
Simple_repeat |
| scaffold25059 |
7236 |
7416 |
+ |
RS9820 |
Unspecified |
| scaffold25059 |
7557 |
7596 |
+ |
A-rich |
Low_complexity |
| scaffold25059 |
7715 |
7757 |
+ |
A-rich |
Low_complexity |
| scaffold25059 |
7824 |
9152 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold25059 |
7832 |
7879 |
+ |
(TGA)n |
Simple_repeat |
| scaffold25059 |
8700 |
9127 |
+ |
MuDR-1_PD |
DNA/MULE-MuDR |
| scaffold25059 |
9200 |
9409 |
- |
RS9054 |
Unspecified |
| scaffold25059 |
9244 |
9409 |
+ |
RS6304 |
Unspecified |
| scaffold25059 |
9407 |
9581 |
+ |
RS2189 |
Unspecified |
| scaffold25059 |
9547 |
9815 |
+ |
RS3188 |
Unspecified |
| scaffold25059 |
9811 |
9858 |
- |
RS10417 |
Unspecified |
| scaffold25059 |
9868 |
9936 |
+ |
(TAATTT)n |
Simple_repeat |
| scaffold25059 |
10313 |
10340 |
+ |
(T)n |
Simple_repeat |
| scaffold25059 |
10825 |
10869 |
+ |
(TAATACA)n |
Simple_repeat |
| scaffold25059 |
10942 |
10968 |
+ |
A-rich |
Low_complexity |
| scaffold25059 |
11004 |
11271 |
+ |
RS1963 |
Unspecified |
| scaffold25059 |
11480 |
11776 |
+ |
RS1878 |
Unspecified |
| scaffold25059 |
12016 |
12103 |
+ |
A-rich |
Low_complexity |
| scaffold25059 |
12360 |
12391 |
+ |
(TAA)n |
Simple_repeat |
| scaffold25059 |
12983 |
13101 |
- |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold25059 |
13270 |
13348 |
+ |
A-rich |
Low_complexity |
| scaffold25059 |
13537 |
13572 |
+ |
(ATATAA)n |
Simple_repeat |
| scaffold25059 |
14318 |
14739 |
+ |
PL578 |
Unspecified |
| scaffold25059 |
14802 |
15000 |
- |
RS9448 |
Unspecified |
| scaffold25059 |
15050 |
15088 |
+ |
(TTTTT)n |
Simple_repeat |
| scaffold25059 |
15289 |
15324 |
+ |
(AACA)n |
Simple_repeat |
| scaffold25059 |
15474 |
15677 |
- |
RS1436 |
Unspecified |
| scaffold25059 |
16526 |
16617 |
+ |
RS1172 |
Unspecified |
| scaffold25059 |
16537 |
16617 |
+ |
RS356 |
Unspecified |
| scaffold25059 |
16809 |
16881 |
+ |
DNA-2-N2_TA |
DNA/TcMar-Stowaway |
| scaffold25059 |
16809 |
17061 |
+ |
DNA-2-N2_TA |
DNA/TcMar-Stowaway |
| scaffold25059 |
16851 |
17061 |
+ |
RS356 |
Unspecified |
| scaffold25059 |
17338 |
17475 |
+ |
RS949 |
Unspecified |
| scaffold25059 |
17491 |
17583 |
- |
RS1290 |
Unspecified |
| scaffold25059 |
18821 |
18837 |
+ |
(A)n |
Simple_repeat |
| scaffold25059 |
18924 |
19151 |
- |
RS10268 |
Unspecified |
| scaffold25059 |
19186 |
19479 |
+ |
RS35 |
Unspecified |
| scaffold25059 |
19581 |
19765 |
+ |
ENSPM-6_ZM |
DNA/CMC-EnSpm |
| scaffold25059 |
20393 |
20410 |
+ |
(TAT)n |
Simple_repeat |
| scaffold25059 |
21866 |
21938 |
+ |
(AATA)n |
Simple_repeat |
| scaffold25059 |
22965 |
23000 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold25059 |
23344 |
23438 |
- |
Athila8B_I-int |
LTR/Gypsy |
| scaffold25059 |
23659 |
23699 |
+ |
(TTTCT)n |
Simple_repeat |
| scaffold25059 |
23969 |
24076 |
+ |
A-rich |
Low_complexity |
| scaffold25059 |
24168 |
24217 |
+ |
(AAT)n |
Simple_repeat |
| scaffold25059 |
24515 |
24568 |
+ |
(TAATA)n |
Simple_repeat |
| scaffold25059 |
24571 |
24744 |
- |
RS233 |
Unspecified |
| scaffold25059 |
24590 |
24751 |
+ |
RS2719 |
Unspecified |
| scaffold25059 |
24749 |
24973 |
+ |
PL470 |
Unspecified |
| scaffold25059 |
27915 |
28113 |
- |
LTR-1_SBi-LTR |
LTR |
| scaffold25059 |
28591 |
28864 |
- |
RS3550 |
Unspecified |
| scaffold25059 |
29088 |
29336 |
+ |
(ATATGTG)n |
Simple_repeat |
| scaffold25059 |
29289 |
29336 |
+ |
(ATATGTG)n |
Simple_repeat |
| scaffold25059 |
30318 |
30370 |
+ |
(ACTCCGA)n |
Simple_repeat |
| scaffold25059 |
30486 |
30707 |
- |
RS3094 |
Unspecified |
| scaffold25059 |
31383 |
31416 |
+ |
(T)n |
Simple_repeat |
| scaffold25059 |
31979 |
32008 |
+ |
(TCATT)n |
Simple_repeat |
| scaffold25059 |
32238 |
32382 |
- |
RS14292 |
Unspecified |
| scaffold25059 |
35305 |
35594 |
+ |
L1-5_STu |
LINE/L1 |
| scaffold25059 |
36129 |
37124 |
+ |
LINE |
LINE(TransposonPSI) |
| scaffold25059 |
36138 |
36888 |
+ |
L1-1_GM |
LINE/L1 |
| scaffold25059 |
38207 |
38236 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold25059 |
38489 |
38527 |
+ |
(AATT)n |
Simple_repeat |
| scaffold25059 |
38717 |
40297 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold25059 |
39503 |
39621 |
+ |
MuDR-11_SBi |
DNA/MULE-MuDR |