scaffold2599 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold2599 |
1 |
681 |
+ |
PL956 |
Unspecified |
| scaffold2599 |
2766 |
4499 |
+ |
RS200 |
Unspecified |
| scaffold2599 |
4543 |
6370 |
+ |
RS192 |
Unspecified |
| scaffold2599 |
6461 |
6711 |
- |
RS12409 |
Unspecified |
| scaffold2599 |
6523 |
6793 |
+ |
RS1060 |
Unspecified |
| scaffold2599 |
6711 |
6880 |
+ |
RS1060 |
Unspecified |
| scaffold2599 |
6945 |
7014 |
+ |
Gypsy-10_Pru-LTR |
LTR/Gypsy |
| scaffold2599 |
7318 |
7371 |
+ |
(AACACAA)n |
Simple_repeat |
| scaffold2599 |
7843 |
7937 |
+ |
RS1025 |
Unspecified |
| scaffold2599 |
7940 |
8114 |
+ |
RS151 |
Unspecified |
| scaffold2599 |
8300 |
8370 |
+ |
(CACAA)n |
Simple_repeat |
| scaffold2599 |
8492 |
8661 |
+ |
A-rich |
Low_complexity |
| scaffold2599 |
9245 |
9827 |
+ |
RS357 |
Unspecified |
| scaffold2599 |
9942 |
10012 |
+ |
A-rich |
Low_complexity |
| scaffold2599 |
10744 |
10779 |
+ |
(CACGAAA)n |
Simple_repeat |
| scaffold2599 |
10909 |
11961 |
+ |
RS655 |
Unspecified |
| scaffold2599 |
12244 |
12766 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold2599 |
13288 |
13343 |
+ |
(TTGACT)n |
Simple_repeat |
| scaffold2599 |
13684 |
13723 |
+ |
Gypsy-10_Mad-I |
LTR/Gypsy |
| scaffold2599 |
14270 |
14309 |
+ |
(A)n |
Simple_repeat |
| scaffold2599 |
14308 |
14341 |
+ |
(AATGG)n |
Simple_repeat |
| scaffold2599 |
14533 |
14608 |
+ |
Gypsy-62_SB-I |
LTR/Gypsy |
| scaffold2599 |
15102 |
15835 |
+ |
RS530 |
Unspecified |
| scaffold2599 |
15239 |
15862 |
+ |
PL219 |
Unspecified |
| scaffold2599 |
15956 |
16353 |
+ |
Gypsy-62_SB-I |
LTR/Gypsy |
| scaffold2599 |
16536 |
17029 |
+ |
Gypsy-62_SB-I |
LTR/Gypsy |
| scaffold2599 |
16536 |
17790 |
+ |
Gypsy-62_SB-I |
LTR/Gypsy |
| scaffold2599 |
16938 |
17790 |
+ |
RS309 |
Unspecified |
| scaffold2599 |
18473 |
18949 |
+ |
CAULIV1 |
LTR/Caulimovirus |
| scaffold2599 |
18989 |
19146 |
+ |
CAULIV1 |
LTR/Caulimovirus |
| scaffold2599 |
19172 |
19534 |
- |
CAULIV1 |
LTR/Caulimovirus |
| scaffold2599 |
19586 |
21077 |
- |
Caulimovirus-1_VVi |
LTR/Caulimovirus |
| scaffold2599 |
21532 |
21868 |
- |
RS8338 |
Unspecified |
| scaffold2599 |
22018 |
22583 |
- |
CAULIV1 |
LTR/Caulimovirus |
| scaffold2599 |
22583 |
23416 |
- |
RS2758 |
Unspecified |
| scaffold2599 |
22583 |
23638 |
+ |
RS934 |
Unspecified |
| scaffold2599 |
25022 |
25148 |
- |
RS813 |
Unspecified |
| scaffold2599 |
25044 |
25234 |
- |
RS225 |
Unspecified |
| scaffold2599 |
25177 |
26011 |
+ |
(CTTTTT)n |
Simple_repeat |
| scaffold2599 |
25976 |
26011 |
+ |
(CTTTTT)n |
Simple_repeat |
| scaffold2599 |
26701 |
26898 |
+ |
(T)n |
Simple_repeat |
| scaffold2599 |
26701 |
26726 |
+ |
(T)n |
Simple_repeat |
| scaffold2599 |
26701 |
26820 |
+ |
(T)n |
Simple_repeat |
| scaffold2599 |
26715 |
26898 |
+ |
RS435 |
Unspecified |
| scaffold2599 |
26715 |
26820 |
+ |
RS166 |
Unspecified |
| scaffold2599 |
26833 |
27677 |
+ |
RS437 |
Unspecified |
| scaffold2599 |
28354 |
29511 |
- |
RS730 |
Unspecified |
| scaffold2599 |
29530 |
29606 |
+ |
(TTTG)n |
Simple_repeat |
| scaffold2599 |
31429 |
31468 |
+ |
(GTTAGAT)n |
Simple_repeat |
| scaffold2599 |
31527 |
33632 |
+ |
RS934 |
Unspecified |
| scaffold2599 |
33734 |
34465 |
+ |
RS1563 |
Unspecified |
| scaffold2599 |
34180 |
34612 |
+ |
RS413 |
Unspecified |
| scaffold2599 |
36033 |
36611 |
- |
Caulimovirus-1_VVi |
LTR/Caulimovirus |
| scaffold2599 |
36672 |
37066 |
- |
Caulimovirus-1_VVi |
LTR/Caulimovirus |
| scaffold2599 |
39270 |
39299 |
+ |
(CATT)n |
Simple_repeat |
| scaffold2599 |
39306 |
39359 |
- |
hAT-12_VVi |
DNA/hAT-Tag1 |
| scaffold2599 |
39738 |
40757 |
- |
RS446 |
Unspecified |
| scaffold2599 |
41148 |
41187 |
+ |
(TGT)n |
Simple_repeat |
| scaffold2599 |
41192 |
41235 |
+ |
(TTGTGG)n |
Simple_repeat |
| scaffold2599 |
41667 |
41911 |
- |
RS1539 |
Unspecified |
| scaffold2599 |
41979 |
42333 |
+ |
Gypsy-28_PTr-I |
LTR/Gypsy |
| scaffold2599 |
42518 |
43005 |
+ |
Gypsy-28_PTr-I |
LTR/Gypsy |
| scaffold2599 |
43533 |
43608 |
+ |
Gypsy-28_PTr-I |
LTR/Gypsy |
| scaffold2599 |
44114 |
44148 |
+ |
(TTTAGT)n |
Simple_repeat |
| scaffold2599 |
44584 |
44628 |
+ |
(TAT)n |
Simple_repeat |
| scaffold2599 |
44632 |
44683 |
+ |
A-rich |
Low_complexity |
| scaffold2599 |
44751 |
45936 |
- |
RS265 |
Unspecified |
| scaffold2599 |
46180 |
46210 |
+ |
(T)n |
Simple_repeat |
| scaffold2599 |
47301 |
47433 |
+ |
TRAMET1 |
DNA/TcMar-Stowaway |
| scaffold2599 |
47888 |
47912 |
+ |
(T)n |
Simple_repeat |
| scaffold2599 |
48108 |
48422 |
- |
RS277 |
Unspecified |
| scaffold2599 |
48800 |
48876 |
+ |
(TTCTTCA)n |
Simple_repeat |
| scaffold2599 |
48969 |
48997 |
+ |
(T)n |
Simple_repeat |
| scaffold2599 |
49191 |
49262 |
+ |
A-rich |
Low_complexity |
| scaffold2599 |
49701 |
49910 |
+ |
RS3087 |
Unspecified |
| scaffold2599 |
49916 |
49943 |
+ |
(T)n |
Simple_repeat |
| scaffold2599 |
50549 |
50582 |
+ |
GA-rich |
Low_complexity |
| scaffold2599 |
51318 |
51375 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold2599 |
51776 |
51818 |
+ |
(ATA)n |
Simple_repeat |
| scaffold2599 |
51899 |
51932 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold2599 |
51943 |
52292 |
+ |
RS8 |
Unspecified |
| scaffold2599 |
52558 |
52624 |
+ |
(ATAAT)n |
Simple_repeat |
| scaffold2599 |
52645 |
52908 |
+ |
RS311 |
Unspecified |
| scaffold2599 |
53463 |
53720 |
- |
RS237 |
Unspecified |
| scaffold2599 |
53999 |
54029 |
+ |
(T)n |
Simple_repeat |
| scaffold2599 |
54727 |
55209 |
+ |
PL271 |
Unspecified |
| scaffold2599 |
55929 |
55969 |
+ |
(TTGTG)n |
Simple_repeat |
| scaffold2599 |
56024 |
56126 |
- |
RS832 |
Unspecified |
| scaffold2599 |
57384 |
57426 |
+ |
(TTTCGGT)n |
Simple_repeat |
| scaffold2599 |
61421 |
61536 |
+ |
(CTG)n |
Simple_repeat |
| scaffold2599 |
61537 |
61550 |
+ |
DIRS-1_CR |
LTR/DIRS |
| scaffold2599 |
61554 |
61635 |
+ |
(AGGCTG)n |
Simple_repeat |
| scaffold2599 |
62781 |
62813 |
+ |
(TTGTGT)n |
Simple_repeat |
| scaffold2599 |
63159 |
63205 |
+ |
(TTTGTTT)n |
Simple_repeat |
| scaffold2599 |
64034 |
64183 |
+ |
(TTGTAT)n |
Simple_repeat |
| scaffold2599 |
74484 |
74958 |
- |
RS2532 |
Unspecified |