scaffold260 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold260 |
295 |
344 |
+ |
(AT)n |
Simple_repeat |
| scaffold260 |
295 |
584 |
+ |
(AT)n |
Simple_repeat |
| scaffold260 |
325 |
584 |
- |
PL17 |
Unspecified |
| scaffold260 |
866 |
927 |
+ |
(TA)n |
Simple_repeat |
| scaffold260 |
1369 |
1404 |
+ |
(T)n |
Simple_repeat |
| scaffold260 |
1782 |
2032 |
+ |
RS356 |
Unspecified |
| scaffold260 |
2010 |
2083 |
- |
RS581 |
Unspecified |
| scaffold260 |
2343 |
2702 |
- |
RS4658 |
Unspecified |
| scaffold260 |
3027 |
3315 |
- |
RS4658 |
Unspecified |
| scaffold260 |
3996 |
4025 |
+ |
(TA)n |
Simple_repeat |
| scaffold260 |
4023 |
4087 |
- |
PL17 |
Unspecified |
| scaffold260 |
4171 |
4194 |
+ |
(TA)n |
Simple_repeat |
| scaffold260 |
5136 |
5187 |
+ |
(GTTGAT)n |
Simple_repeat |
| scaffold260 |
5641 |
6301 |
+ |
RS860 |
Unspecified |
| scaffold260 |
6004 |
6582 |
+ |
RS1310 |
Unspecified |
| scaffold260 |
6635 |
6662 |
+ |
A-rich |
Low_complexity |
| scaffold260 |
7117 |
7151 |
+ |
GA-rich |
Low_complexity |
| scaffold260 |
7323 |
7358 |
+ |
(TA)n |
Simple_repeat |
| scaffold260 |
7922 |
8129 |
+ |
RS582 |
Unspecified |
| scaffold260 |
9972 |
10127 |
+ |
RS14254 |
Unspecified |
| scaffold260 |
10836 |
10876 |
+ |
(ACC)n |
Simple_repeat |
| scaffold260 |
11203 |
11340 |
- |
RS10945 |
Unspecified |
| scaffold260 |
11298 |
11509 |
- |
RS12964 |
Unspecified |
| scaffold260 |
11519 |
11557 |
+ |
RS1299 |
Unspecified |
| scaffold260 |
11618 |
12000 |
+ |
RS1299 |
Unspecified |
| scaffold260 |
11897 |
12029 |
- |
RS12199 |
Unspecified |
| scaffold260 |
12010 |
12272 |
- |
RS7094 |
Unspecified |
| scaffold260 |
12099 |
12297 |
- |
RS5636 |
Unspecified |
| scaffold260 |
12175 |
12428 |
- |
RS12199 |
Unspecified |
| scaffold260 |
12549 |
12799 |
- |
RS3891 |
Unspecified |
| scaffold260 |
12622 |
12837 |
- |
RS12199 |
Unspecified |
| scaffold260 |
12813 |
13015 |
- |
RS1321 |
Unspecified |
| scaffold260 |
13162 |
13283 |
+ |
L1-1_PTr |
LINE/L1 |
| scaffold260 |
19202 |
19335 |
- |
RS10945 |
Unspecified |
| scaffold260 |
19236 |
19407 |
- |
RS12964 |
Unspecified |
| scaffold260 |
19253 |
19427 |
- |
RS12964 |
Unspecified |
| scaffold260 |
19285 |
19442 |
- |
RS12964 |
Unspecified |
| scaffold260 |
19306 |
19443 |
- |
RS382 |
Unspecified |
| scaffold260 |
19930 |
20011 |
+ |
A-rich |
Low_complexity |
| scaffold260 |
20025 |
20119 |
+ |
(AAT)n |
Simple_repeat |
| scaffold260 |
22575 |
23313 |
+ |
RS1374 |
Unspecified |
| scaffold260 |
27994 |
28073 |
+ |
RS2406 |
Unspecified |
| scaffold260 |
28041 |
28136 |
+ |
RS3891 |
Unspecified |
| scaffold260 |
29419 |
29554 |
+ |
RS7576 |
Unspecified |
| scaffold260 |
29625 |
29791 |
+ |
RS5597 |
Unspecified |
| scaffold260 |
29931 |
30237 |
+ |
(T)n |
Simple_repeat |
| scaffold260 |
30188 |
30237 |
+ |
(T)n |
Simple_repeat |
| scaffold260 |
30263 |
30368 |
+ |
RS1299 |
Unspecified |
| scaffold260 |
30389 |
30525 |
+ |
RS10819 |
Unspecified |
| scaffold260 |
30692 |
30864 |
+ |
RS4613 |
Unspecified |
| scaffold260 |
30892 |
31017 |
+ |
RS3872 |
Unspecified |
| scaffold260 |
30938 |
31019 |
+ |
RS11563 |
Unspecified |
| scaffold260 |
32912 |
32942 |
+ |
(A)n |
Simple_repeat |
| scaffold260 |
32953 |
33053 |
+ |
RS12895 |
Unspecified |
| scaffold260 |
33168 |
33271 |
- |
RS12810 |
Unspecified |
| scaffold260 |
33491 |
33541 |
+ |
(TA)n |
Simple_repeat |
| scaffold260 |
33549 |
33838 |
+ |
RS72 |
Unspecified |
| scaffold260 |
33839 |
33863 |
+ |
(T)n |
Simple_repeat |
| scaffold260 |
34000 |
34045 |
+ |
(ATA)n |
Simple_repeat |
| scaffold260 |
35077 |
36229 |
- |
ATLINEIII |
LINE/L1 |
| scaffold260 |
36908 |
36974 |
- |
ATLINEIII |
LINE/L1 |
| scaffold260 |
37293 |
37529 |
- |
L1-1_PTr |
LINE/L1 |
| scaffold260 |
38870 |
38915 |
+ |
(TC)n |
Simple_repeat |
| scaffold260 |
39306 |
39340 |
+ |
(ATAC)n |
Simple_repeat |
| scaffold260 |
39589 |
39642 |
+ |
A-rich |
Low_complexity |
| scaffold260 |
39844 |
39882 |
+ |
(T)n |
Simple_repeat |
| scaffold260 |
39904 |
40880 |
- |
RS446 |
Unspecified |
| scaffold260 |
40881 |
40938 |
- |
RS18072 |
Unspecified |
| scaffold260 |
41355 |
41394 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold260 |
41395 |
41432 |
+ |
(ATTAAT)n |
Simple_repeat |
| scaffold260 |
42269 |
42317 |
+ |
(A)n |
Simple_repeat |
| scaffold260 |
42526 |
42583 |
+ |
A-rich |
Low_complexity |
| scaffold260 |
43147 |
43172 |
+ |
(T)n |
Simple_repeat |
| scaffold260 |
43451 |
43788 |
+ |
RS1150 |
Unspecified |
| scaffold260 |
43596 |
43812 |
+ |
RS1704 |
Unspecified |
| scaffold260 |
43860 |
47708 |
+ |
Copia-66_GM-I |
LTR/Copia |
| scaffold260 |
47729 |
49350 |
+ |
RS658 |
Unspecified |
| scaffold260 |
49343 |
49967 |
+ |
Copia-66_GM-I |
LTR/Copia |
| scaffold260 |
49979 |
50015 |
+ |
Copia-66_GM-I |
LTR/Copia |
| scaffold260 |
50020 |
50322 |
- |
RS3218 |
Unspecified |
| scaffold260 |
50120 |
50459 |
+ |
RS1150 |
Unspecified |
| scaffold260 |
50275 |
50483 |
+ |
RS1704 |
Unspecified |
| scaffold260 |
50780 |
50813 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold260 |
51566 |
52051 |
+ |
RS554 |
Unspecified |
| scaffold260 |
52144 |
52216 |
+ |
(TATTTTA)n |
Simple_repeat |
| scaffold260 |
53245 |
53272 |
+ |
(A)n |
Simple_repeat |
| scaffold260 |
53531 |
53625 |
+ |
(ATA)n |
Simple_repeat |
| scaffold260 |
55702 |
55712 |
+ |
(A)n |
Simple_repeat |
| scaffold260 |
55713 |
55742 |
+ |
(AAT)n |
Simple_repeat |
| scaffold260 |
55743 |
55759 |
+ |
(A)n |
Simple_repeat |
| scaffold260 |
55933 |
55965 |
+ |
(ACGACCC)n |
Simple_repeat |
| scaffold260 |
56093 |
56161 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold260 |
56997 |
57177 |
+ |
(ATA)n |
Simple_repeat |
| scaffold260 |
57280 |
57308 |
+ |
(TAAA)n |
Simple_repeat |
| scaffold260 |
57323 |
57410 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold260 |
58119 |
58159 |
+ |
(GTCGG)n |
Simple_repeat |
| scaffold260 |
58143 |
58201 |
+ |
G-rich |
Low_complexity |
| scaffold260 |
59377 |
59475 |
+ |
RS689 |
Unspecified |
| scaffold260 |
60069 |
60133 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold260 |
60579 |
60671 |
+ |
(GTATGA)n |
Simple_repeat |
| scaffold260 |
61083 |
61148 |
+ |
(TTGATG)n |
Simple_repeat |
| scaffold260 |
61852 |
61939 |
+ |
Copia-4_GM-I |
LTR/Copia |
| scaffold260 |
62497 |
62542 |
+ |
(AGG)n |
Simple_repeat |
| scaffold260 |
63361 |
63387 |
+ |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold260 |
65317 |
65907 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold260 |
66416 |
66453 |
+ |
(TTTTAA)n |
Simple_repeat |
| scaffold260 |
66765 |
67170 |
- |
RS265 |
Unspecified |
| scaffold260 |
67161 |
67245 |
- |
RS265 |
Unspecified |
| scaffold260 |
67211 |
67453 |
- |
RS3464 |
Unspecified |
| scaffold260 |
68975 |
69615 |
- |
RS984 |
Unspecified |
| scaffold260 |
71255 |
71412 |
+ |
A-rich |
Low_complexity |
| scaffold260 |
73917 |
73960 |
+ |
RS731 |
Unspecified |
| scaffold260 |
73975 |
74023 |
+ |
RS731 |
Unspecified |
| scaffold260 |
74042 |
74337 |
+ |
RS731 |
Unspecified |
| scaffold260 |
74414 |
75331 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold260 |
74430 |
75330 |
+ |
Copia-13_SB-I |
LTR/Copia |
| scaffold260 |
75634 |
75779 |
+ |
Copia-13_SB-I |
LTR/Copia |
| scaffold260 |
75844 |
77379 |
+ |
Copia-13_SB-I |
LTR/Copia |
| scaffold260 |
75844 |
77588 |
+ |
Copia-13_SB-I |
LTR/Copia |
| scaffold260 |
77285 |
77588 |
- |
PL816 |
Unspecified |
| scaffold260 |
78820 |
78864 |
+ |
A-rich |
Low_complexity |
| scaffold260 |
79059 |
79627 |
- |
RS2105 |
Unspecified |
| scaffold260 |
79726 |
79745 |
+ |
(ATG)n |
Simple_repeat |
| scaffold260 |
80170 |
84838 |
+ |
Copia-89_VV-I |
LTR/Copia |
| scaffold260 |
85235 |
85562 |
- |
RS2105 |
Unspecified |
| scaffold260 |
85569 |
86153 |
- |
RS420 |
Unspecified |
| scaffold260 |
86154 |
87126 |
- |
RS265 |
Unspecified |
| scaffold260 |
88186 |
88922 |
+ |
Athila4C_I-int |
LTR/Gypsy |
| scaffold260 |
88977 |
89459 |
+ |
Copia-4_GM-I |
LTR/Copia |
| scaffold260 |
89675 |
89793 |
+ |
Copia-4_GM-I |
LTR/Copia |
| scaffold260 |
90746 |
90804 |
+ |
(A)n |
Simple_repeat |
| scaffold260 |
90874 |
91165 |
+ |
RS1746 |
Unspecified |
| scaffold260 |
90941 |
91239 |
- |
RS1746 |
Unspecified |
| scaffold260 |
91693 |
92145 |
- |
RS338 |
Unspecified |
| scaffold260 |
258664 |
258756 |
+ |
(ACCCG)n |
Simple_repeat |