scaffold26167 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold26167 |
1419 |
1497 |
+ |
RS101 |
Unspecified |
| scaffold26167 |
4312 |
4420 |
+ |
RS398 |
Unspecified |
| scaffold26167 |
6465 |
6536 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold26167 |
8526 |
8562 |
+ |
(A)n |
Simple_repeat |
| scaffold26167 |
9806 |
9846 |
+ |
A-rich |
Low_complexity |
| scaffold26167 |
10784 |
10862 |
+ |
(ATTTA)n |
Simple_repeat |
| scaffold26167 |
10922 |
11254 |
+ |
RS976 |
Unspecified |
| scaffold26167 |
11284 |
11309 |
+ |
(TAA)n |
Simple_repeat |
| scaffold26167 |
11659 |
11713 |
+ |
(TGTTCA)n |
Simple_repeat |
| scaffold26167 |
11895 |
11944 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold26167 |
12457 |
12536 |
- |
RS767 |
Unspecified |
| scaffold26167 |
12623 |
12662 |
+ |
(CTTTCT)n |
Simple_repeat |
| scaffold26167 |
12753 |
13231 |
+ |
RS767 |
Unspecified |
| scaffold26167 |
13437 |
13493 |
- |
TTO1_NT_I-int |
LTR/Copia |
| scaffold26167 |
13467 |
13524 |
- |
TTO1_NT_I-int |
LTR/Copia |
| scaffold26167 |
13711 |
13790 |
+ |
A-rich |
Low_complexity |
| scaffold26167 |
15257 |
16185 |
- |
RS655 |
Unspecified |
| scaffold26167 |
16289 |
16798 |
- |
RS52 |
Unspecified |
| scaffold26167 |
17407 |
17451 |
+ |
A-rich |
Low_complexity |
| scaffold26167 |
17532 |
17817 |
+ |
PL504 |
Unspecified |
| scaffold26167 |
17807 |
17971 |
+ |
PL504 |
Unspecified |
| scaffold26167 |
18146 |
18175 |
+ |
(AATTT)n |
Simple_repeat |
| scaffold26167 |
21996 |
22016 |
+ |
(CCT)n |
Simple_repeat |
| scaffold26167 |
22530 |
22574 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold26167 |
23466 |
23499 |
+ |
(AGA)n |
Simple_repeat |
| scaffold26167 |
23541 |
23763 |
+ |
Gypsy-46_Mad-I |
LTR/Gypsy |
| scaffold26167 |
24455 |
25548 |
+ |
Gypsy-46_Mad-I |
LTR/Gypsy |
| scaffold26167 |
26232 |
27110 |
+ |
Gypsy-46_Mad-I |
LTR/Gypsy |
| scaffold26167 |
26232 |
26694 |
+ |
Gypsy-46_Mad-I |
LTR/Gypsy |
| scaffold26167 |
26576 |
27110 |
+ |
RS7988 |
Unspecified |
| scaffold26167 |
27168 |
27510 |
+ |
RS8919 |
Unspecified |
| scaffold26167 |
27938 |
31293 |
+ |
Gypsy-46_Mad-I |
LTR/Gypsy |
| scaffold26167 |
31528 |
31662 |
+ |
Gypsy-46_Mad-I |
LTR/Gypsy |
| scaffold26167 |
31715 |
31787 |
+ |
Gypsy-46_Mad-I |
LTR/Gypsy |
| scaffold26167 |
31849 |
32222 |
+ |
RS7375 |
Unspecified |
| scaffold26167 |
32043 |
32266 |
+ |
RS9630 |
Unspecified |
| scaffold26167 |
33162 |
33349 |
+ |
RS10717 |
Unspecified |
| scaffold26167 |
34428 |
34608 |
+ |
Gypsy-46_Mad-I |
LTR/Gypsy |
| scaffold26167 |
35663 |
35700 |
+ |
(TA)n |
Simple_repeat |
| scaffold26167 |
36469 |
36832 |
+ |
RS9176 |
Unspecified |
| scaffold26167 |
37057 |
37199 |
+ |
A-rich |
Low_complexity |
| scaffold26167 |
37655 |
37683 |
+ |
(AGA)n |
Simple_repeat |
| scaffold26167 |
37783 |
37818 |
+ |
(ATTTTG)n |
Simple_repeat |
| scaffold26167 |
38540 |
38673 |
+ |
(GACCC)n |
Simple_repeat |
| scaffold26167 |
40794 |
41737 |
+ |
RS135 |
Unspecified |
| scaffold26167 |
42019 |
42053 |
+ |
(ATGAATT)n |
Simple_repeat |
| scaffold26167 |
42149 |
42284 |
- |
RS423 |
Unspecified |
| scaffold26167 |
42314 |
44833 |
+ |
RIRE1_I-int |
LTR/Copia |
| scaffold26167 |
45037 |
46485 |
+ |
RIRE1_I-int |
LTR/Copia |
| scaffold26167 |
46473 |
47150 |
+ |
RIRE1_I-int |
LTR/Copia |
| scaffold26167 |
47287 |
47717 |
+ |
RS482 |
Unspecified |
| scaffold26167 |
48809 |
49095 |
+ |
RS24 |
Unspecified |
| scaffold26167 |
50142 |
50327 |
+ |
RS5864 |
Unspecified |
| scaffold26167 |
50446 |
50479 |
+ |
(ACA)n |
Simple_repeat |
| scaffold26167 |
50847 |
50892 |
+ |
(AC)n |
Simple_repeat |
| scaffold26167 |
51728 |
51758 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold26167 |
51843 |
51927 |
+ |
(ATTGATA)n |
Simple_repeat |
| scaffold26167 |
53783 |
54255 |
- |
PL571 |
Unspecified |
| scaffold26167 |
56100 |
56878 |
- |
RS2212 |
Unspecified |
| scaffold26167 |
58896 |
59301 |
- |
Gypsy3-VV_I-int |
LTR/Gypsy |
| scaffold26167 |
59301 |
60358 |
- |
PL571 |
Unspecified |
| scaffold26167 |
60956 |
60979 |
+ |
(T)n |
Simple_repeat |
| scaffold26167 |
61508 |
61910 |
+ |
RS1834 |
Unspecified |
| scaffold26167 |
62869 |
62901 |
+ |
(TCTCTA)n |
Simple_repeat |
| scaffold26167 |
62968 |
63430 |
+ |
RS35 |
Unspecified |
| scaffold26167 |
63634 |
63687 |
+ |
(AT)n |
Simple_repeat |
| scaffold26167 |
63755 |
63813 |
+ |
(TTTTC)n |
Simple_repeat |
| scaffold26167 |
63872 |
63914 |
+ |
(TTTTT)n |
Simple_repeat |
| scaffold26167 |
66956 |
66980 |
+ |
(A)n |
Simple_repeat |
| scaffold26167 |
67107 |
67308 |
+ |
RS1202 |
Unspecified |
| scaffold26167 |
67317 |
67470 |
+ |
RS1202 |
Unspecified |
| scaffold26167 |
67730 |
68037 |
+ |
RS2518 |
Unspecified |
| scaffold26167 |
67937 |
68266 |
+ |
RS7643 |
Unspecified |
| scaffold26167 |
69157 |
69267 |
- |
Gypsy-22_SB-I |
LTR/Gypsy |
| scaffold26167 |
69185 |
69315 |
+ |
L1-4_VC |
LINE/L1 |
| scaffold26167 |
70503 |
70559 |
+ |
STOWAWAY2_SB |
DNA/TcMar-Stowaway |
| scaffold26167 |
72061 |
72110 |
- |
RS3197 |
Unspecified |
| scaffold26167 |
72408 |
72457 |
- |
RS3197 |
Unspecified |
| scaffold26167 |
72887 |
72993 |
- |
RS6614 |
Unspecified |
| scaffold26167 |
72996 |
73125 |
+ |
RS3197 |
Unspecified |
| scaffold26167 |
73326 |
73360 |
+ |
A-rich |
Low_complexity |
| scaffold26167 |
73571 |
73651 |
- |
RS7630 |
Unspecified |
| scaffold26167 |
73708 |
73888 |
- |
RS3303 |
Unspecified |
| scaffold26167 |
73956 |
74376 |
+ |
RS4590 |
Unspecified |
| scaffold26167 |
74239 |
74506 |
- |
RS5428 |
Unspecified |
| scaffold26167 |
74521 |
74919 |
- |
RS4978 |
Unspecified |
| scaffold26167 |
75041 |
75148 |
+ |
RS8356 |
Unspecified |
| scaffold26167 |
76615 |
76639 |
+ |
(AAAC)n |
Simple_repeat |
| scaffold26167 |
76681 |
76718 |
+ |
(GAA)n |
Simple_repeat |
| scaffold26167 |
76936 |
77009 |
+ |
(CCT)n |
Simple_repeat |
| scaffold26167 |
78901 |
79047 |
- |
RS1669 |
Unspecified |
| scaffold26167 |
79046 |
79465 |
+ |
RS6405 |
Unspecified |
| scaffold26167 |
79477 |
79526 |
+ |
(TTTATTT)n |
Simple_repeat |
| scaffold26167 |
79837 |
80170 |
+ |
PL757 |
Unspecified |
| scaffold26167 |
79897 |
80215 |
+ |
RS1716 |
Unspecified |
| scaffold26167 |
80216 |
80280 |
- |
RS1669 |
Unspecified |
| scaffold26167 |
81776 |
82015 |
- |
RS2251 |
Unspecified |
| scaffold26167 |
82011 |
82178 |
- |
RS12328 |
Unspecified |
| scaffold26167 |
82220 |
82237 |
+ |
(T)n |
Simple_repeat |
| scaffold26167 |
82647 |
82665 |
+ |
(T)n |
Simple_repeat |
| scaffold26167 |
86327 |
86554 |
- |
RS10904 |
Unspecified |
| scaffold26167 |
87267 |
87351 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold26167 |
87404 |
87450 |
+ |
PL700 |
Unspecified |
| scaffold26167 |
87479 |
87665 |
+ |
RS8990 |
Unspecified |
| scaffold26167 |
87636 |
87941 |
+ |
RS3096 |
Unspecified |
| scaffold26167 |
89895 |
89999 |
+ |
RS14011 |
Unspecified |
| scaffold26167 |
90152 |
90176 |
+ |
(CACC)n |
Simple_repeat |
| scaffold26167 |
91317 |
91943 |
+ |
RS13426 |
Unspecified |
| scaffold26167 |
92948 |
93191 |
- |
RS11174 |
Unspecified |
| scaffold26167 |
94512 |
95601 |
- |
RS3169 |
Unspecified |
| scaffold26167 |
95622 |
95986 |
- |
RS5107 |
Unspecified |
| scaffold26167 |
95986 |
96341 |
- |
RS12987 |
Unspecified |
| scaffold26167 |
98559 |
98677 |
+ |
(AGAATAAG)n |
Simple_repeat |
| scaffold26167 |
98912 |
99052 |
+ |
PL306 |
Unspecified |
| scaffold26167 |
99458 |
99534 |
+ |
(AGAGTA)n |
Simple_repeat |
| scaffold26167 |
99915 |
100007 |
- |
LT1_EPa |
LTR? |
| scaffold26167 |
100030 |
100137 |
- |
RS11610 |
Unspecified |
| scaffold26167 |
100094 |
100205 |
+ |
PL852 |
Unspecified |
| scaffold26167 |
100204 |
100326 |
+ |
RS170 |
Unspecified |
| scaffold26167 |
100713 |
100771 |
- |
RS187 |
Unspecified |
| scaffold26167 |
100851 |
101101 |
+ |
PL77 |
Unspecified |
| scaffold26167 |
101105 |
101134 |
+ |
(TTAGGA)n |
Simple_repeat |
| scaffold26167 |
101889 |
101939 |
+ |
(GA)n |
Simple_repeat |
| scaffold26167 |
102030 |
102226 |
+ |
RS1371 |
Unspecified |
| scaffold26167 |
102218 |
102417 |
+ |
RS2107 |
Unspecified |
| scaffold26167 |
102689 |
104001 |
+ |
RS2476 |
Unspecified |
| scaffold26167 |
103680 |
104883 |
+ |
RS814 |
Unspecified |