scaffold26316 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold26316 |
219 |
241 |
+ |
(A)n |
Simple_repeat |
| scaffold26316 |
487 |
609 |
+ |
RS263 |
Unspecified |
| scaffold26316 |
509 |
1486 |
+ |
RS288 |
Unspecified |
| scaffold26316 |
3418 |
3457 |
+ |
G-rich |
Low_complexity |
| scaffold26316 |
3837 |
3993 |
+ |
(TGAAC)n |
Simple_repeat |
| scaffold26316 |
5126 |
5162 |
+ |
(A)n |
Simple_repeat |
| scaffold26316 |
5302 |
5329 |
+ |
(A)n |
Simple_repeat |
| scaffold26316 |
6142 |
6356 |
+ |
RS1332 |
Unspecified |
| scaffold26316 |
6334 |
6473 |
- |
RS3580 |
Unspecified |
| scaffold26316 |
6596 |
6642 |
+ |
(TTTGCTA)n |
Simple_repeat |
| scaffold26316 |
6889 |
7030 |
+ |
TRAMET1 |
DNA/TcMar-Stowaway |
| scaffold26316 |
7438 |
8164 |
- |
RS337 |
Unspecified |
| scaffold26316 |
8169 |
8185 |
+ |
(A)n |
Simple_repeat |
| scaffold26316 |
10785 |
10833 |
+ |
(AT)n |
Simple_repeat |
| scaffold26316 |
11341 |
11450 |
+ |
ZhAT8_ZM |
DNA/hAT-Ac |
| scaffold26316 |
11357 |
11481 |
+ |
Copia-85_ST-I |
LTR/Copia |
| scaffold26316 |
11746 |
11974 |
+ |
Copia-85_ST-I |
LTR/Copia |
| scaffold26316 |
12485 |
12518 |
+ |
(TAA)n |
Simple_repeat |
| scaffold26316 |
13294 |
13343 |
+ |
(TTTTC)n |
Simple_repeat |
| scaffold26316 |
14196 |
15473 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold26316 |
14371 |
14437 |
- |
LINE1-46_SBi |
LINE/L1 |
| scaffold26316 |
14591 |
14978 |
- |
LINE1I_MT |
LINE/L1 |
| scaffold26316 |
16190 |
16244 |
- |
L1-2_GM |
LINE/L1 |
| scaffold26316 |
16588 |
16613 |
+ |
(TGGAAT)n |
Simple_repeat |
| scaffold26316 |
17613 |
17974 |
+ |
RS6506 |
Unspecified |
| scaffold26316 |
19657 |
19691 |
+ |
(T)n |
Simple_repeat |
| scaffold26316 |
19937 |
19978 |
+ |
A-rich |
Low_complexity |
| scaffold26316 |
20052 |
20224 |
+ |
PL687 |
Unspecified |
| scaffold26316 |
20232 |
20391 |
+ |
(TTG)n |
Simple_repeat |
| scaffold26316 |
20390 |
20898 |
+ |
PL110 |
Unspecified |
| scaffold26316 |
21532 |
21559 |
+ |
GA-rich |
Low_complexity |
| scaffold26316 |
21895 |
21951 |
+ |
(CTACCA)n |
Simple_repeat |
| scaffold26316 |
21973 |
22045 |
+ |
(TCATTG)n |
Simple_repeat |
| scaffold26316 |
22063 |
22113 |
+ |
(TTA)n |
Simple_repeat |
| scaffold26316 |
24967 |
25131 |
+ |
(CCA)n |
Simple_repeat |
| scaffold26316 |
24983 |
25149 |
+ |
Sat-1_CPa |
Satellite |
| scaffold26316 |
25797 |
25815 |
+ |
(A)n |
Simple_repeat |
| scaffold26316 |
26346 |
26399 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold26316 |
26588 |
26733 |
+ |
RS901 |
Unspecified |
| scaffold26316 |
27254 |
27472 |
+ |
RS586 |
Unspecified |
| scaffold26316 |
27547 |
27645 |
- |
RETROSOR1_SB-int |
LTR/Gypsy |
| scaffold26316 |
27714 |
27891 |
- |
RETROSOR1_SB-int |
LTR/Gypsy |
| scaffold26316 |
28859 |
28886 |
+ |
(AC)n |
Simple_repeat |
| scaffold26316 |
30359 |
30390 |
+ |
A-rich |
Low_complexity |
| scaffold26316 |
30551 |
30590 |
+ |
A-rich |
Low_complexity |
| scaffold26316 |
30666 |
30706 |
+ |
A-rich |
Low_complexity |
| scaffold26316 |
30814 |
30857 |
+ |
(T)n |
Simple_repeat |
| scaffold26316 |
30882 |
30902 |
+ |
(T)n |
Simple_repeat |
| scaffold26316 |
31368 |
31420 |
+ |
(TTATTAT)n |
Simple_repeat |
| scaffold26316 |
31398 |
31426 |
+ |
(TATT)n |
Simple_repeat |
| scaffold26316 |
32968 |
33114 |
- |
RS859 |
Unspecified |
| scaffold26316 |
33116 |
33688 |
+ |
RS1901 |
Unspecified |
| scaffold26316 |
35125 |
35311 |
+ |
RS1743 |
Unspecified |
| scaffold26316 |
35504 |
35556 |
+ |
(CT)n |
Simple_repeat |
| scaffold26316 |
35879 |
36025 |
- |
RS859 |
Unspecified |
| scaffold26316 |
36117 |
36152 |
+ |
(ACTTGA)n |
Simple_repeat |
| scaffold26316 |
37819 |
37939 |
- |
MuDR-8_VV |
DNA/MULE-MuDR |
| scaffold26316 |
38720 |
38773 |
+ |
(AATAAG)n |
Simple_repeat |
| scaffold26316 |
38822 |
38953 |
- |
RS2542 |
Unspecified |
| scaffold26316 |
39198 |
39290 |
+ |
(CCAATAA)n |
Simple_repeat |
| scaffold26316 |
39371 |
39436 |
+ |
RS2542 |
Unspecified |
| scaffold26316 |
41451 |
41598 |
+ |
RS2106 |
Unspecified |
| scaffold26316 |
42137 |
42366 |
- |
RS3313 |
Unspecified |
| scaffold26316 |
42259 |
42552 |
- |
RS4258 |
Unspecified |
| scaffold26316 |
42927 |
43006 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold26316 |
43007 |
43223 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold26316 |
44162 |
44284 |
+ |
RS2764 |
Unspecified |
| scaffold26316 |
44415 |
44580 |
- |
RS3117 |
Unspecified |
| scaffold26316 |
44679 |
44746 |
+ |
A-rich |
Low_complexity |
| scaffold26316 |
44949 |
45113 |
+ |
RS8185 |
Unspecified |
| scaffold26316 |
45186 |
45305 |
+ |
(AATTTTAT)n |
Simple_repeat |
| scaffold26316 |
47981 |
48131 |
- |
RS6385 |
Unspecified |
| scaffold26316 |
48823 |
49017 |
- |
PL699 |
Unspecified |
| scaffold26316 |
56201 |
56294 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold26316 |
56319 |
56353 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold26316 |
56350 |
56597 |
+ |
RS625 |
Unspecified |
| scaffold26316 |
56495 |
56708 |
+ |
RS4314 |
Unspecified |
| scaffold26316 |
57845 |
59434 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold26316 |
57896 |
57964 |
+ |
Copia15-PTR_I-int |
LTR/Copia |
| scaffold26316 |
58401 |
59269 |
+ |
Copia15-PTR_I-int |
LTR/Copia |
| scaffold26316 |
59686 |
61337 |
+ |
Copia15-PTR_I-int |
LTR/Copia |
| scaffold26316 |
61342 |
61589 |
+ |
RS625 |
Unspecified |
| scaffold26316 |
61593 |
61646 |
+ |
(TGAAC)n |
Simple_repeat |
| scaffold26316 |
62341 |
62398 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold26316 |
62554 |
62597 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold26316 |
64371 |
64483 |
+ |
RS8459 |
Unspecified |
| scaffold26316 |
64673 |
64712 |
+ |
RS3239 |
Unspecified |
| scaffold26316 |
64709 |
65159 |
+ |
RS3239 |
Unspecified |
| scaffold26316 |
65653 |
65767 |
+ |
RS4064 |
Unspecified |
| scaffold26316 |
66970 |
67151 |
+ |
RS4543 |
Unspecified |
| scaffold26316 |
67066 |
67177 |
+ |
RS12096 |
Unspecified |
| scaffold26316 |
68259 |
68363 |
- |
RS16382 |
Unspecified |
| scaffold26316 |
68428 |
68535 |
+ |
RS16382 |
Unspecified |
| scaffold26316 |
68695 |
68870 |
+ |
RS43 |
Unspecified |
| scaffold26316 |
68979 |
69115 |
+ |
RS5457 |
Unspecified |
| scaffold26316 |
69061 |
69481 |
+ |
RS1537 |
Unspecified |
| scaffold26316 |
69665 |
69683 |
+ |
(A)n |
Simple_repeat |
| scaffold26316 |
70064 |
70118 |
- |
PL46 |
Unspecified |
| scaffold26316 |
70229 |
70262 |
+ |
(AATT)n |
Simple_repeat |
| scaffold26316 |
70302 |
70378 |
+ |
(TTTTATT)n |
Simple_repeat |
| scaffold26316 |
70384 |
70484 |
+ |
(GGC)n |
Simple_repeat |
| scaffold26316 |
70498 |
70528 |
+ |
(T)n |
Simple_repeat |
| scaffold26316 |
70633 |
70659 |
+ |
(T)n |
Simple_repeat |
| scaffold26316 |
70812 |
70948 |
+ |
RS3521 |
Unspecified |
| scaffold26316 |
71010 |
71039 |
+ |
(TAA)n |
Simple_repeat |
| scaffold26316 |
71089 |
71122 |
+ |
(AATTTAA)n |
Simple_repeat |
| scaffold26316 |
71182 |
71445 |
- |
RS2523 |
Unspecified |
| scaffold26316 |
71445 |
71569 |
- |
RS2523 |
Unspecified |
| scaffold26316 |
71844 |
71896 |
+ |
(AATTAA)n |
Simple_repeat |
| scaffold26316 |
73907 |
73937 |
+ |
(T)n |
Simple_repeat |
| scaffold26316 |
74227 |
74479 |
+ |
RS586 |
Unspecified |
| scaffold26316 |
74726 |
74789 |
+ |
(ATTAA)n |
Simple_repeat |
| scaffold26316 |
74762 |
74822 |
+ |
A-rich |
Low_complexity |
| scaffold26316 |
75370 |
75424 |
+ |
(AAAAT)n |
Simple_repeat |
| scaffold26316 |
75667 |
75691 |
+ |
(CTT)n |
Simple_repeat |
| scaffold26316 |
75842 |
75867 |
+ |
(TTC)n |
Simple_repeat |
| scaffold26316 |
79061 |
79219 |
+ |
(A)n |
Simple_repeat |
| scaffold26316 |
79154 |
79219 |
+ |
(A)n |
Simple_repeat |
| scaffold26316 |
84330 |
84353 |
+ |
(TAT)n |
Simple_repeat |
| scaffold26316 |
84449 |
84480 |
+ |
(TAT)n |
Simple_repeat |
| scaffold26316 |
84654 |
84688 |
+ |
(ATCTCT)n |
Simple_repeat |
| scaffold26316 |
86916 |
86964 |
+ |
GA-rich |
Low_complexity |
| scaffold26316 |
87166 |
87202 |
+ |
(T)n |
Simple_repeat |
| scaffold26316 |
87205 |
87236 |
+ |
(A)n |
Simple_repeat |
| scaffold26316 |
87862 |
87896 |
+ |
(AATT)n |
Simple_repeat |
| scaffold26316 |
90089 |
90275 |
- |
RS172 |
Unspecified |
| scaffold26316 |
90277 |
90331 |
- |
RS172 |
Unspecified |
| scaffold26316 |
90576 |
90675 |
+ |
Copia-4_Mad-I |
LTR/Copia |
| scaffold26316 |
90688 |
91422 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold26316 |
91573 |
91959 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold26316 |
91603 |
91667 |
+ |
Copia-4_Mad-I |
LTR/Copia |
| scaffold26316 |
91796 |
91851 |
+ |
Copia-5_Pru-I |
LTR/Copia |
| scaffold26316 |
92012 |
92036 |
+ |
(A)n |
Simple_repeat |
| scaffold26316 |
92399 |
92440 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold26316 |
92910 |
92941 |
+ |
(T)n |
Simple_repeat |
| scaffold26316 |
93545 |
93832 |
+ |
RS748 |
Unspecified |
| scaffold26316 |
94001 |
94199 |
+ |
PL294 |
Unspecified |