scaffold26332 Repeat List
genome |
start |
end |
strand |
repeat-name |
repeat-class |
scaffold26332 |
1 |
100 |
+ |
PL571 |
Unspecified |
scaffold26332 |
98 |
123 |
+ |
(ATT)n |
Simple_repeat |
scaffold26332 |
125 |
149 |
+ |
(T)n |
Simple_repeat |
scaffold26332 |
160 |
257 |
- |
RS17927 |
Unspecified |
scaffold26332 |
1357 |
1389 |
+ |
A-rich |
Low_complexity |
scaffold26332 |
1507 |
2466 |
- |
LINE |
LINE(TransposonPSI) |
scaffold26332 |
3342 |
3387 |
+ |
(CAACAA)n |
Simple_repeat |
scaffold26332 |
3672 |
3714 |
+ |
(ATCGTG)n |
Simple_repeat |
scaffold26332 |
3864 |
3962 |
+ |
(TTA)n |
Simple_repeat |
scaffold26332 |
4045 |
4147 |
+ |
(TTA)n |
Simple_repeat |
scaffold26332 |
5329 |
5413 |
+ |
(TTA)n |
Simple_repeat |
scaffold26332 |
5497 |
6208 |
+ |
RS257 |
Unspecified |
scaffold26332 |
6892 |
6926 |
+ |
RS1438 |
Unspecified |
scaffold26332 |
7533 |
7551 |
+ |
(T)n |
Simple_repeat |
scaffold26332 |
7595 |
7619 |
+ |
(A)n |
Simple_repeat |
scaffold26332 |
8504 |
8544 |
+ |
(TTATGAA)n |
Simple_repeat |
scaffold26332 |
12178 |
12194 |
+ |
(ATA)n |
Simple_repeat |
scaffold26332 |
12202 |
12231 |
+ |
(AATTG)n |
Simple_repeat |
scaffold26332 |
12601 |
12638 |
+ |
(TTC)n |
Simple_repeat |
scaffold26332 |
14419 |
14465 |
+ |
A-rich |
Low_complexity |
scaffold26332 |
19108 |
19125 |
+ |
(T)n |
Simple_repeat |
scaffold26332 |
21980 |
22010 |
+ |
(T)n |
Simple_repeat |
scaffold26332 |
22811 |
22934 |
+ |
(A)n |
Simple_repeat |
scaffold26332 |
23134 |
23242 |
+ |
(CAGTT)n |
Simple_repeat |
scaffold26332 |
23247 |
23283 |
- |
RS537 |
Unspecified |
scaffold26332 |
23251 |
23344 |
+ |
RS18358 |
Unspecified |
scaffold26332 |
23387 |
23550 |
+ |
(CCCGA)n |
Simple_repeat |
scaffold26332 |
23711 |
23867 |
+ |
(CCCGA)n |
Simple_repeat |
scaffold26332 |
24018 |
24191 |
+ |
(ATA)n |
Simple_repeat |
scaffold26332 |
24192 |
24359 |
+ |
(CAGTT)n |
Simple_repeat |
scaffold26332 |
24590 |
24623 |
+ |
(ATTT)n |
Simple_repeat |
scaffold26332 |
25564 |
25652 |
- |
PL580 |
Unspecified |
scaffold26332 |
25687 |
26070 |
- |
PL774 |
Unspecified |
scaffold26332 |
26367 |
26418 |
+ |
(TAATTT)n |
Simple_repeat |
scaffold26332 |
26862 |
28218 |
+ |
RS602 |
Unspecified |
scaffold26332 |
28321 |
28342 |
+ |
(TGCT)n |
Simple_repeat |
scaffold26332 |
33295 |
33332 |
+ |
(CATT)n |
Simple_repeat |
scaffold26332 |
33378 |
33399 |
+ |
(AGT)n |
Simple_repeat |
scaffold26332 |
33554 |
33610 |
+ |
(TTCAA)n |
Simple_repeat |
scaffold26332 |
33957 |
34008 |
+ |
(TTCCTC)n |
Simple_repeat |
scaffold26332 |
35712 |
35752 |
+ |
(ATGTTTT)n |
Simple_repeat |
scaffold26332 |
35819 |
35848 |
+ |
(TA)n |
Simple_repeat |
scaffold26332 |
37178 |
37364 |
+ |
Copia-3_PTri-I |
LTR/Copia |
scaffold26332 |
40746 |
40765 |
+ |
(T)n |
Simple_repeat |
scaffold26332 |
40955 |
40988 |
+ |
(TCTCAT)n |
Simple_repeat |
scaffold26332 |
43726 |
43796 |
+ |
RS1334 |
Unspecified |
scaffold26332 |
44400 |
44548 |
+ |
RS38 |
Unspecified |
scaffold26332 |
44704 |
44735 |
+ |
(AATC)n |
Simple_repeat |
scaffold26332 |
44787 |
44811 |
+ |
(TAAT)n |
Simple_repeat |
scaffold26332 |
44835 |
44869 |
+ |
(ATACA)n |
Simple_repeat |
scaffold26332 |
45753 |
45821 |
- |
EnSpm1_SB |
DNA/CMC-EnSpm |
scaffold26332 |
48119 |
48144 |
+ |
(T)n |
Simple_repeat |
scaffold26332 |
49079 |
49125 |
+ |
(TA)n |
Simple_repeat |
scaffold26332 |
49321 |
49711 |
+ |
PL429 |
Unspecified |
scaffold26332 |
49771 |
49788 |
+ |
(T)n |
Simple_repeat |
scaffold26332 |
49840 |
49881 |
+ |
A-rich |
Low_complexity |
scaffold26332 |
50009 |
50049 |
+ |
(T)n |
Simple_repeat |
scaffold26332 |
50515 |
50553 |
- |
RS1438 |
Unspecified |
scaffold26332 |
50545 |
51415 |
- |
PL296 |
Unspecified |
scaffold26332 |
51412 |
52192 |
+ |
PL169 |
Unspecified |
scaffold26332 |
52313 |
52372 |
+ |
A-rich |
Low_complexity |
scaffold26332 |
52721 |
52819 |
+ |
(TTTATT)n |
Simple_repeat |
scaffold26332 |
52973 |
53222 |
- |
RS367 |
Unspecified |
scaffold26332 |
53265 |
53309 |
+ |
(ATATCCG)n |
Simple_repeat |
scaffold26332 |
53312 |
53461 |
+ |
hAT-17N1_ZM |
DNA/hAT-Ac |
scaffold26332 |
53340 |
53483 |
- |
hAT-17N1_ZM |
DNA/hAT-Ac |
scaffold26332 |
54025 |
54198 |
+ |
RS891 |
Unspecified |
scaffold26332 |
54280 |
54329 |
+ |
(T)n |
Simple_repeat |
scaffold26332 |
54457 |
54518 |
+ |
(AATTAA)n |
Simple_repeat |
scaffold26332 |
54540 |
54594 |
+ |
(ATTTAAG)n |
Simple_repeat |
scaffold26332 |
54769 |
54814 |
+ |
(AAT)n |
Simple_repeat |
scaffold26332 |
54864 |
55302 |
+ |
(AT)n |
Simple_repeat |
scaffold26332 |
54864 |
54942 |
+ |
(AT)n |
Simple_repeat |
scaffold26332 |
54932 |
55302 |
- |
PL296 |
Unspecified |
scaffold26332 |
55324 |
55358 |
+ |
(ATTG)n |
Simple_repeat |
scaffold26332 |
55795 |
55812 |
+ |
(T)n |
Simple_repeat |
scaffold26332 |
55939 |
55975 |
+ |
(T)n |
Simple_repeat |
scaffold26332 |
56590 |
56631 |
+ |
(TGAAGAT)n |
Simple_repeat |
scaffold26332 |
56744 |
56785 |
+ |
(TGAAGAT)n |
Simple_repeat |
scaffold26332 |
57106 |
57149 |
+ |
A-rich |
Low_complexity |
scaffold26332 |
57223 |
57790 |
- |
PL782 |
Unspecified |
scaffold26332 |
58186 |
58228 |
+ |
A-rich |
Low_complexity |
scaffold26332 |
58982 |
59017 |
+ |
(GGCCC)n |
Simple_repeat |
scaffold26332 |
60653 |
60790 |
- |
L1-14_GM |
LINE/L1 |
scaffold26332 |
60851 |
60931 |
- |
L1-5_STu |
LINE/L1 |
scaffold26332 |
60944 |
61007 |
+ |
(AC)n |
Simple_repeat |
scaffold26332 |
61195 |
61290 |
- |
Copia-69_GM-LTR |
LTR/Copia |
scaffold26332 |
61677 |
61731 |
+ |
(ACTTTG)n |
Simple_repeat |
scaffold26332 |
62425 |
62659 |
+ |
PL106 |
Unspecified |
scaffold26332 |
62759 |
62834 |
+ |
STOWAWAY2_SB |
DNA/TcMar-Stowaway |
scaffold26332 |
62835 |
63071 |
+ |
PL106 |
Unspecified |
scaffold26332 |
64166 |
64373 |
+ |
RS1933 |
Unspecified |
scaffold26332 |
64375 |
64765 |
+ |
RS29 |
Unspecified |
scaffold26332 |
64765 |
64906 |
+ |
RS1933 |
Unspecified |
scaffold26332 |
65081 |
65288 |
- |
SHAMET |
DNA/TcMar-Stowaway |
scaffold26332 |
68137 |
68165 |
+ |
(T)n |
Simple_repeat |
scaffold26332 |
69376 |
69423 |
+ |
(TTA)n |
Simple_repeat |
scaffold26332 |
69496 |
70823 |
- |
Caulimovirus-1_VVi |
LTR/Caulimovirus |
scaffold26332 |
70816 |
71049 |
- |
RS356 |
Unspecified |
scaffold26332 |
85332 |
86973 |
- |
RS934 |
Unspecified |
scaffold26332 |
88092 |
88596 |
+ |
RS5117 |
Unspecified |
scaffold26332 |
88661 |
88668 |
+ |
(AATTTT)n |
Simple_repeat |
scaffold26332 |
88669 |
88702 |
+ |
(TATTT)n |
Simple_repeat |
scaffold26332 |
89347 |
89408 |
+ |
Gypsy18-PTR_LTR |
LTR/Gypsy |
scaffold26332 |
89768 |
90034 |
+ |
Gypsy18-PTR_I-int |
LTR/Gypsy |
scaffold26332 |
90032 |
90145 |
+ |
PL810 |
Unspecified |
scaffold26332 |
94361 |
94462 |
+ |
Ogre-PT1_I-int |
LTR/Gypsy |
scaffold26332 |
95219 |
95327 |
+ |
Ogre-VP1_I-int |
LTR/Gypsy |
scaffold26332 |
95974 |
96543 |
- |
PL113 |
Unspecified |
scaffold26332 |
96617 |
96747 |
- |
RS709 |
Unspecified |
scaffold26332 |
96744 |
97548 |
- |
RS709 |
Unspecified |
scaffold26332 |
97379 |
97616 |
- |
RS709 |
Unspecified |
scaffold26332 |
97449 |
97662 |
- |
RS709 |
Unspecified |
scaffold26332 |
97764 |
98577 |
+ |
RS247 |
Unspecified |
scaffold26332 |
98578 |
98679 |
- |
EnSpm-5_Mad |
DNA/CMC-EnSpm |
scaffold26332 |
99116 |
99864 |
+ |
RS247 |
Unspecified |
scaffold26332 |
100342 |
100395 |
+ |
A-rich |
Low_complexity |