scaffold2646 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold2646 |
1 |
99 |
+ |
RS934 |
Unspecified |
| scaffold2646 |
99 |
450 |
+ |
RS944 |
Unspecified |
| scaffold2646 |
242 |
571 |
- |
RS4509 |
Unspecified |
| scaffold2646 |
443 |
721 |
+ |
RS741 |
Unspecified |
| scaffold2646 |
847 |
1370 |
+ |
RS822 |
Unspecified |
| scaffold2646 |
1371 |
1624 |
- |
RS117 |
Unspecified |
| scaffold2646 |
2747 |
2793 |
+ |
(T)n |
Simple_repeat |
| scaffold2646 |
3186 |
3315 |
- |
LSU-rRNA_Ath |
rRNA |
| scaffold2646 |
6620 |
6722 |
- |
RS12036 |
Unspecified |
| scaffold2646 |
7105 |
8931 |
- |
SSU-rRNA_Ath |
rRNA |
| scaffold2646 |
9117 |
9488 |
- |
RS6825 |
Unspecified |
| scaffold2646 |
9915 |
9973 |
- |
RS6133 |
Unspecified |
| scaffold2646 |
9923 |
10057 |
- |
RS6133 |
Unspecified |
| scaffold2646 |
10008 |
10142 |
- |
RS6133 |
Unspecified |
| scaffold2646 |
10092 |
10226 |
- |
RS6133 |
Unspecified |
| scaffold2646 |
10177 |
10311 |
- |
RS6133 |
Unspecified |
| scaffold2646 |
10261 |
10400 |
- |
RS6133 |
Unspecified |
| scaffold2646 |
10353 |
10430 |
- |
RS6133 |
Unspecified |
| scaffold2646 |
10457 |
10563 |
- |
RS10264 |
Unspecified |
| scaffold2646 |
10688 |
10975 |
+ |
RS7009 |
Unspecified |
| scaffold2646 |
11135 |
11429 |
- |
RS12453 |
Unspecified |
| scaffold2646 |
12067 |
12509 |
- |
SSU-rRNA_Ath |
rRNA |
| scaffold2646 |
12994 |
13084 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold2646 |
15280 |
15428 |
- |
RS9032 |
Unspecified |
| scaffold2646 |
15390 |
15869 |
- |
RS7782 |
Unspecified |
| scaffold2646 |
17764 |
17780 |
+ |
(A)n |
Simple_repeat |
| scaffold2646 |
18401 |
18465 |
+ |
(GGT)n |
Simple_repeat |
| scaffold2646 |
18519 |
18547 |
+ |
(T)n |
Simple_repeat |
| scaffold2646 |
19036 |
19115 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold2646 |
19175 |
19418 |
+ |
RS4 |
Unspecified |
| scaffold2646 |
20321 |
20472 |
- |
RS9032 |
Unspecified |
| scaffold2646 |
21568 |
21657 |
+ |
(ATTAT)n |
Simple_repeat |
| scaffold2646 |
22613 |
22629 |
+ |
(A)n |
Simple_repeat |
| scaffold2646 |
23192 |
23224 |
+ |
(GAAGAT)n |
Simple_repeat |
| scaffold2646 |
27486 |
27520 |
- |
RS108 |
Unspecified |
| scaffold2646 |
30111 |
30155 |
- |
Gypsy-9-I_CR |
LTR/Gypsy |
| scaffold2646 |
30164 |
30257 |
+ |
(AGGCTC)n |
Simple_repeat |
| scaffold2646 |
30258 |
30269 |
+ |
(CGAGGC)n |
Simple_repeat |
| scaffold2646 |
31396 |
31488 |
+ |
(TTGTAGT)n |
Simple_repeat |
| scaffold2646 |
32712 |
32893 |
+ |
(ATTTGT)n |
Simple_repeat |
| scaffold2646 |
32989 |
33409 |
- |
RS811 |
Unspecified |
| scaffold2646 |
34348 |
34393 |
+ |
ATHILA-5_SBi-I |
LTR/Gypsy |
| scaffold2646 |
35053 |
35195 |
+ |
ATHILA-5_SBi-I |
LTR/Gypsy |
| scaffold2646 |
36548 |
36791 |
+ |
ATHILA-5_SBi-I |
LTR/Gypsy |
| scaffold2646 |
37201 |
37273 |
+ |
Athila4A_I-int |
LTR/Gypsy |
| scaffold2646 |
37748 |
37797 |
+ |
Gypsy-10_Mad-I |
LTR/Gypsy |
| scaffold2646 |
38338 |
38388 |
+ |
A-rich |
Low_complexity |
| scaffold2646 |
38638 |
38685 |
+ |
WHAM2_TM-int |
LTR/Gypsy |
| scaffold2646 |
41066 |
41459 |
+ |
RS7333 |
Unspecified |
| scaffold2646 |
41373 |
41880 |
- |
PL913 |
Unspecified |
| scaffold2646 |
42186 |
42711 |
+ |
RS23 |
Unspecified |
| scaffold2646 |
42212 |
42254 |
+ |
(TTGTA)n |
Simple_repeat |
| scaffold2646 |
42694 |
42757 |
- |
Gypsy-10_Pru-LTR |
LTR/Gypsy |