scaffold2652 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold2652 |
1 |
984 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold2652 |
1 |
681 |
- |
Copia-30-I_VV |
LTR/Copia |
| scaffold2652 |
67 |
984 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold2652 |
98 |
681 |
- |
Copia-30-I_VV |
LTR/Copia |
| scaffold2652 |
815 |
869 |
+ |
(CCTCGA)n |
Simple_repeat |
| scaffold2652 |
890 |
938 |
- |
Copia-30-I_VV |
LTR/Copia |
| scaffold2652 |
1130 |
1434 |
- |
Copia-30-I_VV |
LTR/Copia |
| scaffold2652 |
1767 |
1790 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold2652 |
1814 |
2030 |
+ |
RS13304 |
Unspecified |
| scaffold2652 |
3750 |
4094 |
+ |
RS2543 |
Unspecified |
| scaffold2652 |
4161 |
4270 |
+ |
(TGG)n |
Simple_repeat |
| scaffold2652 |
4323 |
4367 |
+ |
(T)n |
Simple_repeat |
| scaffold2652 |
4398 |
4763 |
+ |
RS8 |
Unspecified |
| scaffold2652 |
4765 |
4909 |
+ |
PL476 |
Unspecified |
| scaffold2652 |
4995 |
5032 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold2652 |
5234 |
5304 |
+ |
(TTC)n |
Simple_repeat |
| scaffold2652 |
6033 |
6117 |
+ |
(TCATCAT)n |
Simple_repeat |
| scaffold2652 |
7298 |
7383 |
+ |
ATCopia61_I-int |
LTR/Copia |
| scaffold2652 |
7743 |
7865 |
+ |
ATCopia61_I-int |
LTR/Copia |
| scaffold2652 |
8359 |
8407 |
+ |
ATCopia61_I-int |
LTR/Copia |
| scaffold2652 |
8492 |
8649 |
+ |
ATCopia61_I-int |
LTR/Copia |
| scaffold2652 |
8878 |
9730 |
+ |
ATCopia61_I-int |
LTR/Copia |
| scaffold2652 |
10119 |
11710 |
+ |
ATCopia61_I-int |
LTR/Copia |
| scaffold2652 |
12445 |
12476 |
+ |
(AAT)n |
Simple_repeat |
| scaffold2652 |
13520 |
13552 |
+ |
(CTT)n |
Simple_repeat |
| scaffold2652 |
15063 |
15239 |
+ |
RS233 |
Unspecified |
| scaffold2652 |
15811 |
15844 |
+ |
(TTCAC)n |
Simple_repeat |
| scaffold2652 |
17452 |
17469 |
+ |
(TG)n |
Simple_repeat |
| scaffold2652 |
20420 |
20755 |
+ |
RS52 |
Unspecified |
| scaffold2652 |
20862 |
20981 |
+ |
G-rich |
Low_complexity |
| scaffold2652 |
21426 |
21460 |
+ |
(CGGGT)n |
Simple_repeat |
| scaffold2652 |
21511 |
21921 |
+ |
RS832 |
Unspecified |
| scaffold2652 |
21576 |
21921 |
- |
PL875 |
Unspecified |
| scaffold2652 |
21917 |
22218 |
- |
RS1560 |
Unspecified |
| scaffold2652 |
22541 |
22574 |
+ |
A-rich |
Low_complexity |
| scaffold2652 |
23296 |
23435 |
- |
RS10436 |
Unspecified |
| scaffold2652 |
23633 |
23798 |
+ |
(TTA)n |
Simple_repeat |
| scaffold2652 |
23633 |
23876 |
+ |
(TTA)n |
Simple_repeat |
| scaffold2652 |
23776 |
23876 |
- |
PL296 |
Unspecified |
| scaffold2652 |
23985 |
24245 |
+ |
RS1943 |
Unspecified |
| scaffold2652 |
24447 |
24649 |
+ |
PL884 |
Unspecified |
| scaffold2652 |
24940 |
24976 |
+ |
(ATAAG)n |
Simple_repeat |
| scaffold2652 |
25140 |
25742 |
+ |
RS1351 |
Unspecified |
| scaffold2652 |
25654 |
25789 |
- |
PL296 |
Unspecified |
| scaffold2652 |
25945 |
26001 |
+ |
(TA)n |
Simple_repeat |
| scaffold2652 |
29975 |
30011 |
+ |
(TA)n |
Simple_repeat |
| scaffold2652 |
30421 |
30461 |
+ |
(CGGC)n |
Simple_repeat |
| scaffold2652 |
30817 |
30964 |
+ |
(CAC)n |
Simple_repeat |
| scaffold2652 |
31163 |
31219 |
+ |
(T)n |
Simple_repeat |
| scaffold2652 |
31526 |
31568 |
+ |
(TACAGT)n |
Simple_repeat |
| scaffold2652 |
31867 |
31922 |
+ |
A-rich |
Low_complexity |
| scaffold2652 |
31930 |
32019 |
- |
RS4994 |
Unspecified |
| scaffold2652 |
32257 |
32315 |
+ |
(ACGAGC)n |
Simple_repeat |
| scaffold2652 |
47400 |
47514 |
+ |
PL670 |
Unspecified |