scaffold2660 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold2660 |
1 |
143 |
- |
PL229 |
Unspecified |
| scaffold2660 |
138 |
370 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold2660 |
367 |
1006 |
- |
PL918 |
Unspecified |
| scaffold2660 |
805 |
1030 |
+ |
RS189 |
Unspecified |
| scaffold2660 |
3876 |
4574 |
+ |
PL874 |
Unspecified |
| scaffold2660 |
4551 |
5162 |
- |
RS14 |
Unspecified |
| scaffold2660 |
4759 |
5295 |
+ |
RS403 |
Unspecified |
| scaffold2660 |
5165 |
6073 |
- |
RS14 |
Unspecified |
| scaffold2660 |
5541 |
6508 |
+ |
RS936 |
Unspecified |
| scaffold2660 |
7877 |
7941 |
+ |
Gypsy-13_TA-I |
LTR/Gypsy |
| scaffold2660 |
8543 |
8610 |
+ |
(TTCATC)n |
Simple_repeat |
| scaffold2660 |
8618 |
8734 |
+ |
(AAC)n |
Simple_repeat |
| scaffold2660 |
9190 |
9354 |
+ |
RS4274 |
Unspecified |
| scaffold2660 |
9450 |
9626 |
+ |
RS3231 |
Unspecified |
| scaffold2660 |
9621 |
9828 |
+ |
RS3231 |
Unspecified |
| scaffold2660 |
9812 |
9929 |
+ |
RS69 |
Unspecified |
| scaffold2660 |
10288 |
10398 |
+ |
A-rich |
Low_complexity |
| scaffold2660 |
10419 |
10515 |
+ |
A-rich |
Low_complexity |
| scaffold2660 |
11844 |
12321 |
+ |
RS14 |
Unspecified |
| scaffold2660 |
12396 |
12721 |
+ |
RS5643 |
Unspecified |
| scaffold2660 |
12852 |
12903 |
+ |
(TA)n |
Simple_repeat |
| scaffold2660 |
13012 |
13345 |
+ |
PL344 |
Unspecified |
| scaffold2660 |
14174 |
14417 |
+ |
RS3286 |
Unspecified |
| scaffold2660 |
14174 |
14461 |
+ |
RS4284 |
Unspecified |
| scaffold2660 |
14655 |
14749 |
+ |
RS3286 |
Unspecified |
| scaffold2660 |
15260 |
15366 |
+ |
(TTG)n |
Simple_repeat |
| scaffold2660 |
16025 |
16094 |
- |
Gypsy-13_TA-I |
LTR/Gypsy |
| scaffold2660 |
16530 |
16784 |
- |
LTR-1_SBi-LTR |
LTR |
| scaffold2660 |
17475 |
17505 |
+ |
(TTTATT)n |
Simple_repeat |
| scaffold2660 |
18880 |
18910 |
+ |
(TTTATT)n |
Simple_repeat |
| scaffold2660 |
20005 |
20050 |
+ |
(TTCATG)n |
Simple_repeat |
| scaffold2660 |
20076 |
20139 |
+ |
(ATT)n |
Simple_repeat |
| scaffold2660 |
20892 |
20994 |
- |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold2660 |
21036 |
22832 |
- |
RS2 |
Unspecified |
| scaffold2660 |
23236 |
23331 |
- |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold2660 |
24485 |
24546 |
+ |
(GATGATTT)n |
Simple_repeat |
| scaffold2660 |
24890 |
25188 |
+ |
RS458 |
Unspecified |
| scaffold2660 |
26408 |
26462 |
+ |
(TGAAC)n |
Simple_repeat |
| scaffold2660 |
26523 |
26960 |
- |
PL787 |
Unspecified |
| scaffold2660 |
27502 |
27529 |
+ |
(A)n |
Simple_repeat |
| scaffold2660 |
29220 |
29335 |
+ |
(TGCTTGC)n |
Simple_repeat |
| scaffold2660 |
29819 |
29884 |
- |
ENSPM-6_ZM |
DNA/CMC-EnSpm |
| scaffold2660 |
30220 |
30781 |
- |
Caulimovirus-4_STu |
LTR/Caulimovirus |
| scaffold2660 |
31269 |
31302 |
+ |
A-rich |
Low_complexity |
| scaffold2660 |
31813 |
31832 |
+ |
(T)n |
Simple_repeat |
| scaffold2660 |
32124 |
32546 |
- |
RS3084 |
Unspecified |
| scaffold2660 |
32860 |
32888 |
+ |
(TAT)n |
Simple_repeat |
| scaffold2660 |
33211 |
33275 |
+ |
RS215 |
Unspecified |
| scaffold2660 |
33220 |
33324 |
+ |
RS57 |
Unspecified |
| scaffold2660 |
34342 |
34618 |
+ |
RS14 |
Unspecified |
| scaffold2660 |
34509 |
35098 |
- |
RS583 |
Unspecified |
| scaffold2660 |
34678 |
35228 |
- |
RS403 |
Unspecified |
| scaffold2660 |
35839 |
35936 |
+ |
(TAATT)n |
Simple_repeat |
| scaffold2660 |
35964 |
36364 |
+ |
RS2963 |
Unspecified |
| scaffold2660 |
36445 |
36679 |
+ |
RS5645 |
Unspecified |
| scaffold2660 |
36790 |
36829 |
+ |
(GGT)n |
Simple_repeat |
| scaffold2660 |
36972 |
37049 |
+ |
(GTT)n |
Simple_repeat |
| scaffold2660 |
37050 |
37088 |
+ |
(TAT)n |
Simple_repeat |
| scaffold2660 |
37089 |
37145 |
+ |
(GTT)n |
Simple_repeat |
| scaffold2660 |
37310 |
37858 |
+ |
PL799 |
Unspecified |
| scaffold2660 |
37851 |
38332 |
+ |
PL212 |
Unspecified |
| scaffold2660 |
38830 |
38871 |
+ |
A-rich |
Low_complexity |
| scaffold2660 |
38928 |
39521 |
+ |
RS868 |
Unspecified |
| scaffold2660 |
39523 |
39912 |
- |
PL66 |
Unspecified |
| scaffold2660 |
39980 |
40094 |
+ |
Gypsy22-ZM_I-int |
LTR/Gypsy |
| scaffold2660 |
40276 |
40479 |
- |
PL586 |
Unspecified |
| scaffold2660 |
40480 |
41115 |
+ |
PL771 |
Unspecified |
| scaffold2660 |
41491 |
42112 |
- |
PL219 |
Unspecified |
| scaffold2660 |
42120 |
42347 |
- |
PL538 |
Unspecified |
| scaffold2660 |
42494 |
42523 |
+ |
(ACCCGA)n |
Simple_repeat |
| scaffold2660 |
43096 |
43119 |
+ |
(T)n |
Simple_repeat |
| scaffold2660 |
43546 |
43592 |
+ |
(TCGTCA)n |
Simple_repeat |
| scaffold2660 |
43779 |
44111 |
- |
RS6738 |
Unspecified |