scaffold26871 Repeat List
genome |
start |
end |
strand |
repeat-name |
repeat-class |
scaffold26871 |
1 |
301 |
- |
PL350 |
Unspecified |
scaffold26871 |
340 |
421 |
+ |
A-rich |
Low_complexity |
scaffold26871 |
683 |
710 |
+ |
(CTT)n |
Simple_repeat |
scaffold26871 |
855 |
950 |
+ |
(AATACG)n |
Simple_repeat |
scaffold26871 |
952 |
996 |
+ |
(AATACGATG)n |
Simple_repeat |
scaffold26871 |
1625 |
1811 |
+ |
RS403 |
Unspecified |
scaffold26871 |
1681 |
2273 |
- |
RS14 |
Unspecified |
scaffold26871 |
2296 |
2346 |
+ |
A-rich |
Low_complexity |
scaffold26871 |
2705 |
2755 |
+ |
A-rich |
Low_complexity |
scaffold26871 |
2864 |
2914 |
+ |
A-rich |
Low_complexity |
scaffold26871 |
3253 |
3291 |
+ |
A-rich |
Low_complexity |
scaffold26871 |
3653 |
3695 |
+ |
A-rich |
Low_complexity |
scaffold26871 |
3736 |
3784 |
+ |
(TTCAG)n |
Simple_repeat |
scaffold26871 |
3841 |
3976 |
+ |
RS245 |
Unspecified |
scaffold26871 |
3978 |
4415 |
+ |
Copia-61_VV-I |
LTR/Copia |
scaffold26871 |
4476 |
4754 |
+ |
RS247 |
Unspecified |
scaffold26871 |
4873 |
4930 |
+ |
(AACCGAA)n |
Simple_repeat |
scaffold26871 |
5285 |
6255 |
- |
PL333 |
Unspecified |
scaffold26871 |
6382 |
8008 |
+ |
Copia-61_VV-I |
LTR/Copia |
scaffold26871 |
8295 |
8559 |
+ |
RS106 |
Unspecified |
scaffold26871 |
8734 |
10266 |
- |
Copia-71_VV-I |
LTR/Copia |
scaffold26871 |
10748 |
12045 |
- |
Copia-71_VV-I |
LTR/Copia |
scaffold26871 |
12194 |
13009 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
scaffold26871 |
13384 |
13622 |
- |
RS237 |
Unspecified |
scaffold26871 |
13771 |
14020 |
+ |
RS898 |
Unspecified |
scaffold26871 |
14086 |
14150 |
+ |
RS14 |
Unspecified |
scaffold26871 |
14094 |
14227 |
+ |
RS369 |
Unspecified |
scaffold26871 |
14271 |
14769 |
+ |
RS30 |
Unspecified |
scaffold26871 |
14803 |
14834 |
+ |
A-rich |
Low_complexity |
scaffold26871 |
16466 |
16546 |
+ |
(TTATAA)n |
Simple_repeat |
scaffold26871 |
16773 |
16814 |
+ |
(TAATTTA)n |
Simple_repeat |
scaffold26871 |
16936 |
17302 |
- |
PL143 |
Unspecified |
scaffold26871 |
18116 |
18450 |
+ |
PL902 |
Unspecified |
scaffold26871 |
19045 |
19074 |
+ |
(CAG)n |
Simple_repeat |
scaffold26871 |
19445 |
20568 |
+ |
PL232 |
Unspecified |
scaffold26871 |
20778 |
20841 |
+ |
A-rich |
Low_complexity |
scaffold26871 |
21287 |
21360 |
+ |
(AATTAA)n |
Simple_repeat |
scaffold26871 |
21560 |
21767 |
+ |
RS633 |
Unspecified |
scaffold26871 |
21772 |
22206 |
+ |
RS2859 |
Unspecified |
scaffold26871 |
22194 |
22776 |
- |
PL8 |
Unspecified |
scaffold26871 |
22778 |
22849 |
+ |
RS2859 |
Unspecified |
scaffold26871 |
23124 |
23162 |
+ |
(TTTA)n |
Simple_repeat |
scaffold26871 |
23346 |
24226 |
+ |
RS633 |
Unspecified |
scaffold26871 |
24222 |
24539 |
- |
PL169 |
Unspecified |
scaffold26871 |
24493 |
24696 |
+ |
RS3430 |
Unspecified |
scaffold26871 |
24712 |
25059 |
+ |
RS42 |
Unspecified |
scaffold26871 |
25107 |
25511 |
+ |
RS5073 |
Unspecified |
scaffold26871 |
26151 |
26403 |
- |
RS3764 |
Unspecified |
scaffold26871 |
28445 |
28462 |
+ |
(AAC)n |
Simple_repeat |
scaffold26871 |
29243 |
29270 |
+ |
(ACA)n |
Simple_repeat |
scaffold26871 |
30710 |
30731 |
+ |
(CAA)n |
Simple_repeat |
scaffold26871 |
30904 |
30972 |
+ |
(CAAGCA)n |
Simple_repeat |
scaffold26871 |
31517 |
31573 |
+ |
A-rich |
Low_complexity |
scaffold26871 |
31802 |
31865 |
+ |
(CAT)n |
Simple_repeat |
scaffold26871 |
32110 |
32684 |
- |
MEGY-I_MT |
LTR/Gypsy |
scaffold26871 |
32876 |
33539 |
+ |
RS661 |
Unspecified |
scaffold26871 |
32969 |
33635 |
+ |
RS1207 |
Unspecified |
scaffold26871 |
33893 |
34052 |
- |
MEGY-I_MT |
LTR/Gypsy |
scaffold26871 |
35255 |
35286 |
+ |
(ATAACA)n |
Simple_repeat |
scaffold26871 |
36714 |
36755 |
+ |
A-rich |
Low_complexity |
scaffold26871 |
37273 |
37327 |
+ |
(TTATT)n |
Simple_repeat |
scaffold26871 |
37393 |
38216 |
+ |
RS101 |
Unspecified |
scaffold26871 |
39250 |
39293 |
+ |
(GTATTA)n |
Simple_repeat |
scaffold26871 |
43386 |
43449 |
+ |
(CTCTTTG)n |
Simple_repeat |
scaffold26871 |
43673 |
45636 |
+ |
RS227 |
Unspecified |
scaffold26871 |
47173 |
48281 |
+ |
RS122 |
Unspecified |
scaffold26871 |
48043 |
48372 |
- |
PL869 |
Unspecified |
scaffold26871 |
48089 |
48376 |
+ |
RS122 |
Unspecified |
scaffold26871 |
48132 |
48467 |
- |
PL869 |
Unspecified |
scaffold26871 |
48176 |
48630 |
+ |
RS122 |
Unspecified |
scaffold26871 |
48633 |
48793 |
- |
RS3095 |
Unspecified |
scaffold26871 |
48792 |
48967 |
+ |
RS122 |
Unspecified |
scaffold26871 |
49461 |
49876 |
+ |
PL910 |
Unspecified |
scaffold26871 |
50166 |
50459 |
+ |
RS6828 |
Unspecified |
scaffold26871 |
50874 |
51885 |
- |
Ogre-VP1_I-int |
LTR/Gypsy |
scaffold26871 |
52188 |
54077 |
- |
gypsy |
gypsy(TransposonPSI) |
scaffold26871 |
52367 |
54036 |
- |
Gypsy-53_GM-I |
LTR/Gypsy |
scaffold26871 |
55031 |
55249 |
- |
Gypsy-53_GM-I |
LTR/Gypsy |
scaffold26871 |
55693 |
56000 |
- |
RS11094 |
Unspecified |
scaffold26871 |
55986 |
56307 |
+ |
RS8781 |
Unspecified |
scaffold26871 |
57010 |
58504 |
- |
RS3148 |
Unspecified |
scaffold26871 |
58809 |
60138 |
- |
RS443 |
Unspecified |
scaffold26871 |
59904 |
60668 |
+ |
RS2123 |
Unspecified |
scaffold26871 |
60670 |
61753 |
+ |
Gypsy-29_Mad-I |
LTR/Gypsy |
scaffold26871 |
62128 |
63024 |
+ |
gypsy |
gypsy(TransposonPSI) |
scaffold26871 |
62138 |
62807 |
+ |
Gypsy-29_Mad-I |
LTR/Gypsy |
scaffold26871 |
63255 |
63496 |
+ |
RS2055 |
Unspecified |
scaffold26871 |
63571 |
63675 |
+ |
PL827 |
Unspecified |
scaffold26871 |
63640 |
63819 |
- |
RS11744 |
Unspecified |
scaffold26871 |
68442 |
68767 |
- |
RS859 |
Unspecified |
scaffold26871 |
68668 |
68925 |
+ |
RS1901 |
Unspecified |
scaffold26871 |
68834 |
69314 |
+ |
RS1901 |
Unspecified |
scaffold26871 |
68966 |
69314 |
+ |
RS1574 |
Unspecified |
scaffold26871 |
69891 |
70118 |
+ |
RS2145 |
Unspecified |
scaffold26871 |
70300 |
70329 |
+ |
(ATT)n |
Simple_repeat |
scaffold26871 |
70798 |
70867 |
+ |
(GAATGAT)n |
Simple_repeat |
scaffold26871 |
71869 |
72798 |
+ |
RS379 |
Unspecified |
scaffold26871 |
72533 |
72889 |
+ |
RS12812 |
Unspecified |
scaffold26871 |
73113 |
73789 |
- |
PL780 |
Unspecified |
scaffold26871 |
73759 |
74384 |
- |
RS1210 |
Unspecified |
scaffold26871 |
76040 |
76109 |
+ |
(GAATGAT)n |
Simple_repeat |
scaffold26871 |
76816 |
77019 |
+ |
(AATTC)n |
Simple_repeat |
scaffold26871 |
77385 |
77455 |
+ |
(TTCAG)n |
Simple_repeat |
scaffold26871 |
77511 |
77627 |
+ |
(TTCAG)n |
Simple_repeat |
scaffold26871 |
77660 |
78055 |
+ |
RS8672 |
Unspecified |
scaffold26871 |
78734 |
79513 |
- |
LINE |
LINE(TransposonPSI) |
scaffold26871 |
79539 |
79583 |
+ |
(TTCAG)n |
Simple_repeat |
scaffold26871 |
79588 |
79647 |
+ |
(ATTCAGTTCA)n |
Simple_repeat |
scaffold26871 |
80386 |
80412 |
+ |
(ATTCA)n |
Simple_repeat |
scaffold26871 |
80548 |
80629 |
+ |
(ATT)n |
Simple_repeat |
scaffold26871 |
81326 |
81530 |
- |
RS2688 |
Unspecified |
scaffold26871 |
81385 |
82358 |
+ |
RS135 |
Unspecified |
scaffold26871 |
81789 |
83479 |
- |
RS423 |
Unspecified |
scaffold26871 |
83473 |
84140 |
- |
PL265 |
Unspecified |
scaffold26871 |
84760 |
84952 |
- |
PL560 |
Unspecified |
scaffold26871 |
85434 |
85506 |
+ |
(A)n |
Simple_repeat |
scaffold26871 |
86429 |
86490 |
+ |
(TTAG)n |
Simple_repeat |
scaffold26871 |
86610 |
86870 |
- |
RS109 |
Unspecified |
scaffold26871 |
87648 |
88264 |
+ |
Copia-37_GM-I |
LTR/Copia |
scaffold26871 |
88654 |
91963 |
+ |
Copia-37_GM-I |
LTR/Copia |
scaffold26871 |
92317 |
92584 |
- |
LTR-1_SBi-LTR |
LTR |
scaffold26871 |
93423 |
93578 |
- |
PL439 |
Unspecified |
scaffold26871 |
93580 |
93853 |
+ |
RS1448 |
Unspecified |
scaffold26871 |
93891 |
94141 |
+ |
RS2585 |
Unspecified |
scaffold26871 |
94363 |
94412 |
+ |
A-rich |
Low_complexity |
scaffold26871 |
95479 |
95543 |
+ |
(TTTGA)n |
Simple_repeat |
scaffold26871 |
95599 |
95681 |
+ |
(GGTTTT)n |
Simple_repeat |
scaffold26871 |
96155 |
96232 |
+ |
RS1516 |
Unspecified |
scaffold26871 |
96174 |
97058 |
+ |
PL875 |
Unspecified |
scaffold26871 |
96283 |
97033 |
- |
RS1330 |
Unspecified |
scaffold26871 |
96625 |
97109 |
+ |
RS6652 |
Unspecified |
scaffold26871 |
97138 |
97174 |
+ |
GA-rich |
Low_complexity |
scaffold26871 |
97529 |
97727 |
+ |
RS3462 |
Unspecified |
scaffold26871 |
98032 |
98076 |
+ |
(TGTTTCG)n |
Simple_repeat |
scaffold26871 |
98461 |
98556 |
- |
RS4068 |
Unspecified |