scaffold27188 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold27188 |
5 |
2105 |
- |
RS30 |
Unspecified |
| scaffold27188 |
2170 |
2205 |
+ |
(AATATT)n |
Simple_repeat |
| scaffold27188 |
2728 |
2768 |
+ |
A-rich |
Low_complexity |
| scaffold27188 |
2902 |
3335 |
+ |
PL882 |
Unspecified |
| scaffold27188 |
3064 |
3625 |
+ |
PL469 |
Unspecified |
| scaffold27188 |
3619 |
3781 |
- |
PL800 |
Unspecified |
| scaffold27188 |
3619 |
3844 |
+ |
PL532 |
Unspecified |
| scaffold27188 |
4179 |
4224 |
+ |
(ATTTTT)n |
Simple_repeat |
| scaffold27188 |
4573 |
4916 |
+ |
RS1396 |
Unspecified |
| scaffold27188 |
4989 |
5024 |
+ |
(ATACA)n |
Simple_repeat |
| scaffold27188 |
5116 |
5145 |
+ |
(TTCTT)n |
Simple_repeat |
| scaffold27188 |
5461 |
5522 |
+ |
(ATA)n |
Simple_repeat |
| scaffold27188 |
5747 |
5789 |
+ |
(TATGT)n |
Simple_repeat |
| scaffold27188 |
5915 |
5981 |
+ |
(ATT)n |
Simple_repeat |
| scaffold27188 |
6104 |
6142 |
- |
Gypsy21-PTR_I-int |
LTR/Gypsy |
| scaffold27188 |
6225 |
6279 |
+ |
(ATT)n |
Simple_repeat |
| scaffold27188 |
6644 |
7046 |
+ |
(TAAGAA)n |
Simple_repeat |
| scaffold27188 |
6896 |
7046 |
+ |
(TAAGAA)n |
Simple_repeat |
| scaffold27188 |
7047 |
7079 |
+ |
(GTGAATA)n |
Simple_repeat |
| scaffold27188 |
7080 |
7133 |
+ |
(TAAGAA)n |
Simple_repeat |
| scaffold27188 |
10365 |
10700 |
+ |
PL956 |
Unspecified |
| scaffold27188 |
10697 |
10895 |
+ |
PL956 |
Unspecified |
| scaffold27188 |
12330 |
12442 |
- |
RS51 |
Unspecified |
| scaffold27188 |
13903 |
15297 |
+ |
LINE |
LINE(TransposonPSI) |
| scaffold27188 |
14311 |
15050 |
+ |
L1-1_GM |
LINE/L1 |
| scaffold27188 |
16388 |
16704 |
- |
RS10272 |
Unspecified |
| scaffold27188 |
16945 |
17003 |
+ |
(ACATAA)n |
Simple_repeat |
| scaffold27188 |
17004 |
17014 |
+ |
A-rich |
Low_complexity |
| scaffold27188 |
17093 |
17550 |
+ |
RS449 |
Unspecified |
| scaffold27188 |
18597 |
19825 |
+ |
Copia-71_VV-I |
LTR/Copia |
| scaffold27188 |
19950 |
19993 |
+ |
(CACCTAC)n |
Simple_repeat |
| scaffold27188 |
20194 |
20307 |
- |
cacta |
cacta(TransposonPSI) |
| scaffold27188 |
20984 |
21195 |
- |
PL339 |
Unspecified |
| scaffold27188 |
23051 |
23114 |
+ |
(TTTCTTG)n |
Simple_repeat |
| scaffold27188 |
23834 |
23884 |
+ |
A-rich |
Low_complexity |
| scaffold27188 |
24132 |
24165 |
+ |
(CAT)n |
Simple_repeat |
| scaffold27188 |
25119 |
25177 |
+ |
(ACATAA)n |
Simple_repeat |
| scaffold27188 |
25178 |
25188 |
+ |
A-rich |
Low_complexity |
| scaffold27188 |
25267 |
25724 |
+ |
RS449 |
Unspecified |
| scaffold27188 |
26771 |
27999 |
+ |
Copia-71_VV-I |
LTR/Copia |
| scaffold27188 |
28124 |
28167 |
+ |
(CACCTAC)n |
Simple_repeat |
| scaffold27188 |
28368 |
28481 |
- |
cacta |
cacta(TransposonPSI) |
| scaffold27188 |
29607 |
29672 |
+ |
(AACAA)n |
Simple_repeat |
| scaffold27188 |
30600 |
30794 |
+ |
(TAC)n |
Simple_repeat |
| scaffold27188 |
31169 |
31246 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold27188 |
31454 |
31543 |
+ |
(TACTAT)n |
Simple_repeat |
| scaffold27188 |
31587 |
31626 |
+ |
(AAC)n |
Simple_repeat |
| scaffold27188 |
31793 |
31934 |
+ |
(GTG)n |
Simple_repeat |
| scaffold27188 |
31956 |
31978 |
+ |
(T)n |
Simple_repeat |
| scaffold27188 |
32291 |
34014 |
+ |
Copia-41_BRa-I |
LTR/Copia |
| scaffold27188 |
35432 |
35833 |
+ |
RS2929 |
Unspecified |
| scaffold27188 |
36009 |
36261 |
- |
RS1524 |
Unspecified |
| scaffold27188 |
38859 |
38890 |
+ |
(A)n |
Simple_repeat |
| scaffold27188 |
39458 |
39488 |
+ |
G-rich |
Low_complexity |
| scaffold27188 |
39851 |
40177 |
- |
RS42 |
Unspecified |
| scaffold27188 |
41774 |
42163 |
+ |
PL576 |
Unspecified |
| scaffold27188 |
42734 |
42750 |
+ |
(T)n |
Simple_repeat |
| scaffold27188 |
44040 |
44077 |
+ |
(TAATAAT)n |
Simple_repeat |
| scaffold27188 |
44295 |
44329 |
+ |
(CATGAAT)n |
Simple_repeat |
| scaffold27188 |
45614 |
45681 |
+ |
(T)n |
Simple_repeat |
| scaffold27188 |
45908 |
45953 |
+ |
(AATTGA)n |
Simple_repeat |
| scaffold27188 |
46604 |
48314 |
- |
Copia-82_GM-I |
LTR/Copia |
| scaffold27188 |
48548 |
48742 |
- |
Copia-82_GM-I |
LTR/Copia |
| scaffold27188 |
48837 |
49120 |
+ |
LTR-1_SBi-LTR |
LTR |
| scaffold27188 |
49276 |
49323 |
+ |
(CCCCGC)n |
Simple_repeat |
| scaffold27188 |
49354 |
49388 |
+ |
A-rich |
Low_complexity |
| scaffold27188 |
49712 |
50606 |
- |
Copia-82_GM-I |
LTR/Copia |
| scaffold27188 |
51914 |
51953 |
+ |
A-rich |
Low_complexity |
| scaffold27188 |
52786 |
54353 |
- |
RS337 |
Unspecified |
| scaffold27188 |
52815 |
53935 |
+ |
RS4448 |
Unspecified |
| scaffold27188 |
54699 |
54762 |
+ |
RS5732 |
Unspecified |
| scaffold27188 |
54978 |
55044 |
+ |
A-rich |
Low_complexity |
| scaffold27188 |
55049 |
55142 |
+ |
(AAT)n |
Simple_repeat |
| scaffold27188 |
55754 |
55818 |
+ |
(TAA)n |
Simple_repeat |
| scaffold27188 |
55891 |
56035 |
+ |
RS1323 |
Unspecified |
| scaffold27188 |
56072 |
56248 |
- |
RS4 |
Unspecified |
| scaffold27188 |
56260 |
56441 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold27188 |
56614 |
56838 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold27188 |
57186 |
57242 |
+ |
(CCA)n |
Simple_repeat |
| scaffold27188 |
57259 |
57307 |
+ |
(A)n |
Simple_repeat |
| scaffold27188 |
57324 |
57388 |
+ |
(CAC)n |
Simple_repeat |
| scaffold27188 |
57393 |
57496 |
+ |
A-rich |
Low_complexity |
| scaffold27188 |
57792 |
58052 |
- |
RS5513 |
Unspecified |
| scaffold27188 |
58069 |
58232 |
- |
RS4311 |
Unspecified |
| scaffold27188 |
58614 |
58684 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold27188 |
58843 |
58918 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold27188 |
59133 |
59224 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold27188 |
59698 |
59738 |
- |
RS285 |
Unspecified |
| scaffold27188 |
61108 |
61133 |
+ |
(A)n |
Simple_repeat |
| scaffold27188 |
61331 |
61360 |
+ |
(T)n |
Simple_repeat |
| scaffold27188 |
63350 |
63371 |
+ |
(A)n |
Simple_repeat |
| scaffold27188 |
67378 |
67411 |
+ |
(T)n |
Simple_repeat |
| scaffold27188 |
67739 |
67887 |
- |
RS7999 |
Unspecified |
| scaffold27188 |
67902 |
68063 |
+ |
RS12033 |
Unspecified |
| scaffold27188 |
68321 |
68339 |
+ |
(A)n |
Simple_repeat |
| scaffold27188 |
69671 |
69699 |
+ |
(TTA)n |
Simple_repeat |
| scaffold27188 |
74247 |
74406 |
+ |
A-rich |
Low_complexity |
| scaffold27188 |
75036 |
75093 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold27188 |
75104 |
75137 |
+ |
(TTA)n |
Simple_repeat |
| scaffold27188 |
76676 |
76705 |
+ |
(TTA)n |
Simple_repeat |
| scaffold27188 |
76703 |
77151 |
+ |
PL153 |
Unspecified |
| scaffold27188 |
77507 |
77662 |
+ |
RS79 |
Unspecified |
| scaffold27188 |
77639 |
77745 |
+ |
RS3756 |
Unspecified |
| scaffold27188 |
77664 |
77770 |
+ |
RS15179 |
Unspecified |
| scaffold27188 |
78139 |
78156 |
+ |
(A)n |
Simple_repeat |
| scaffold27188 |
78191 |
78259 |
+ |
(TTA)n |
Simple_repeat |
| scaffold27188 |
78267 |
78297 |
+ |
(T)n |
Simple_repeat |
| scaffold27188 |
78298 |
78397 |
- |
RS17927 |
Unspecified |
| scaffold27188 |
78574 |
78625 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold27188 |
78715 |
78721 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold27188 |
78722 |
78791 |
+ |
(A)n |
Simple_repeat |
| scaffold27188 |
78792 |
78816 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold27188 |
79066 |
79101 |
+ |
(AACGAC)n |
Simple_repeat |
| scaffold27188 |
80085 |
80150 |
+ |
Helitron-N3_ZM |
RC/Helitron |
| scaffold27188 |
80552 |
80712 |
+ |
Helitron-N3_ZM |
RC/Helitron |
| scaffold27188 |
80819 |
80917 |
+ |
RS7197 |
Unspecified |
| scaffold27188 |
81682 |
81767 |
+ |
(CCA)n |
Simple_repeat |
| scaffold27188 |
82348 |
82432 |
+ |
A-rich |
Low_complexity |
| scaffold27188 |
82495 |
82517 |
+ |
(A)n |
Simple_repeat |
| scaffold27188 |
82945 |
82984 |
- |
HAT-N10_Mad |
DNA/hAT-Ac |
| scaffold27188 |
83520 |
83560 |
- |
HAT-N11_Mad |
DNA/hAT-Ac |
| scaffold27188 |
83590 |
83816 |
- |
RS1018 |
Unspecified |
| scaffold27188 |
84018 |
84501 |
- |
PL748 |
Unspecified |
| scaffold27188 |
84549 |
84637 |
- |
RS750 |
Unspecified |
| scaffold27188 |
84795 |
84865 |
+ |
(CGAGCT)n |
Simple_repeat |
| scaffold27188 |
85037 |
85171 |
+ |
MtPH-A6-2-Ia |
DNA/PIF-Harbinger |
| scaffold27188 |
85225 |
85241 |
+ |
(T)n |
Simple_repeat |
| scaffold27188 |
88045 |
89115 |
+ |
A-rich |
Low_complexity |
| scaffold27188 |
93936 |
93975 |
+ |
A-rich |
Low_complexity |
| scaffold27188 |
94120 |
94144 |
+ |
(A)n |
Simple_repeat |
| scaffold27188 |
94295 |
94313 |
+ |
(A)n |
Simple_repeat |
| scaffold27188 |
94856 |
94876 |
+ |
(T)n |
Simple_repeat |
| scaffold27188 |
95090 |
95129 |
+ |
A-rich |
Low_complexity |
| scaffold27188 |
95827 |
95965 |
- |
RS11022 |
Unspecified |
| scaffold27188 |
96004 |
96737 |
+ |
RS14300 |
Unspecified |
| scaffold27188 |
96785 |
96958 |
+ |
RS16411 |
Unspecified |
| scaffold27188 |
97007 |
97219 |
+ |
RS14469 |
Unspecified |
| scaffold27188 |
97223 |
97387 |
+ |
RS8200 |
Unspecified |
| scaffold27188 |
97323 |
97433 |
- |
RS12886 |
Unspecified |
| scaffold27188 |
97532 |
97549 |
+ |
(A)n |
Simple_repeat |
| scaffold27188 |
97764 |
97902 |
- |
RS11022 |
Unspecified |
| scaffold27188 |
97941 |
98674 |
+ |
RS14300 |
Unspecified |
| scaffold27188 |
98722 |
98895 |
+ |
RS16411 |
Unspecified |
| scaffold27188 |
98944 |
99156 |
+ |
RS14469 |
Unspecified |
| scaffold27188 |
99160 |
99324 |
+ |
RS8200 |
Unspecified |
| scaffold27188 |
99260 |
99370 |
- |
RS12886 |
Unspecified |
| scaffold27188 |
99607 |
99845 |
+ |
RS13616 |
Unspecified |
| scaffold27188 |
101223 |
101565 |
- |
RS8023 |
Unspecified |
| scaffold27188 |
101632 |
101756 |
- |
RS10331 |
Unspecified |
| scaffold27188 |
102044 |
102470 |
+ |
RS2015 |
Unspecified |
| scaffold27188 |
102124 |
102528 |
- |
RS138 |
Unspecified |
| scaffold27188 |
102527 |
102676 |
+ |
(TCTAAC)n |
Simple_repeat |
| scaffold27188 |
102611 |
102676 |
+ |
(TCTAAC)n |
Simple_repeat |
| scaffold27188 |
103282 |
103734 |
+ |
PL165 |
Unspecified |
| scaffold27188 |
103739 |
104089 |
+ |
PL165 |
Unspecified |
| scaffold27188 |
104100 |
104123 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold27188 |
104534 |
104696 |
+ |
RS12281 |
Unspecified |
| scaffold27188 |
105131 |
105177 |
- |
L1-8_SBi |
LINE/L1 |