scaffold27588 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold27588 |
71 |
140 |
+ |
(AGTAAT)n |
Simple_repeat |
| scaffold27588 |
235 |
375 |
+ |
RS191 |
Unspecified |
| scaffold27588 |
235 |
309 |
+ |
A-rich |
Low_complexity |
| scaffold27588 |
969 |
1094 |
- |
RS10578 |
Unspecified |
| scaffold27588 |
1131 |
1248 |
- |
RS4619 |
Unspecified |
| scaffold27588 |
1321 |
1482 |
- |
RS3178 |
Unspecified |
| scaffold27588 |
1557 |
1728 |
- |
RS17860 |
Unspecified |
| scaffold27588 |
2109 |
2126 |
+ |
(T)n |
Simple_repeat |
| scaffold27588 |
2189 |
2212 |
+ |
(T)n |
Simple_repeat |
| scaffold27588 |
2468 |
2645 |
- |
RS38 |
Unspecified |
| scaffold27588 |
3926 |
4188 |
- |
PL683 |
Unspecified |
| scaffold27588 |
4911 |
5173 |
+ |
RS82 |
Unspecified |
| scaffold27588 |
5589 |
5626 |
+ |
(A)n |
Simple_repeat |
| scaffold27588 |
5627 |
5646 |
+ |
A-rich |
Low_complexity |
| scaffold27588 |
6388 |
6414 |
+ |
(T)n |
Simple_repeat |
| scaffold27588 |
7140 |
7196 |
+ |
(TTATG)n |
Simple_repeat |
| scaffold27588 |
7203 |
7249 |
+ |
RS285 |
Unspecified |
| scaffold27588 |
7323 |
7374 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold27588 |
7580 |
7624 |
+ |
(TA)n |
Simple_repeat |
| scaffold27588 |
9023 |
9163 |
+ |
(AT)n |
Simple_repeat |
| scaffold27588 |
9117 |
9578 |
+ |
(AT)n |
Simple_repeat |
| scaffold27588 |
9117 |
9163 |
+ |
(AT)n |
Simple_repeat |
| scaffold27588 |
9146 |
9578 |
- |
PL3 |
Unspecified |
| scaffold27588 |
9582 |
9696 |
- |
RS361 |
Unspecified |
| scaffold27588 |
11205 |
11512 |
- |
RS586 |
Unspecified |
| scaffold27588 |
11295 |
11512 |
+ |
RS356 |
Unspecified |
| scaffold27588 |
11771 |
11815 |
+ |
(GAATAT)n |
Simple_repeat |
| scaffold27588 |
14557 |
14579 |
+ |
(T)n |
Simple_repeat |
| scaffold27588 |
15152 |
15324 |
+ |
RS133 |
Unspecified |
| scaffold27588 |
15401 |
15564 |
- |
RS73 |
Unspecified |
| scaffold27588 |
15653 |
15996 |
+ |
PL774 |
Unspecified |
| scaffold27588 |
16067 |
16278 |
+ |
RS22 |
Unspecified |
| scaffold27588 |
16287 |
16552 |
+ |
RS10 |
Unspecified |
| scaffold27588 |
16944 |
16985 |
+ |
(AAT)n |
Simple_repeat |
| scaffold27588 |
17347 |
17462 |
- |
RS1910 |
Unspecified |
| scaffold27588 |
18565 |
18603 |
+ |
GA-rich |
Low_complexity |
| scaffold27588 |
19253 |
19620 |
- |
PL622 |
Unspecified |
| scaffold27588 |
19811 |
19842 |
+ |
(A)n |
Simple_repeat |
| scaffold27588 |
19900 |
19944 |
+ |
GA-rich |
Low_complexity |
| scaffold27588 |
20042 |
20082 |
+ |
(TCACC)n |
Simple_repeat |
| scaffold27588 |
20100 |
20172 |
+ |
(TTT)n |
Simple_repeat |
| scaffold27588 |
21445 |
21556 |
+ |
RS15777 |
Unspecified |
| scaffold27588 |
23391 |
23447 |
+ |
RS26 |
Unspecified |
| scaffold27588 |
25037 |
25072 |
+ |
GA-rich |
Low_complexity |
| scaffold27588 |
25214 |
25242 |
+ |
(TCCCT)n |
Simple_repeat |
| scaffold27588 |
27513 |
27533 |
+ |
(TCA)n |
Simple_repeat |
| scaffold27588 |
27556 |
27647 |
- |
RS3439 |
Unspecified |
| scaffold27588 |
27642 |
27736 |
+ |
(CAGCT)n |
Simple_repeat |
| scaffold27588 |
28402 |
28495 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold27588 |
30169 |
30292 |
+ |
RS3123 |
Unspecified |
| scaffold27588 |
30909 |
31035 |
- |
RS17602 |
Unspecified |
| scaffold27588 |
31037 |
31147 |
- |
RS15537 |
Unspecified |
| scaffold27588 |
31186 |
31247 |
+ |
(T)n |
Simple_repeat |
| scaffold27588 |
35819 |
35881 |
- |
Gypsy-13_Mad-I |
LTR/Gypsy |
| scaffold27588 |
36140 |
36171 |
+ |
(TTC)n |
Simple_repeat |
| scaffold27588 |
36882 |
36901 |
+ |
(T)n |
Simple_repeat |
| scaffold27588 |
39099 |
39431 |
- |
PL637 |
Unspecified |
| scaffold27588 |
39553 |
39635 |
+ |
RS1043 |
Unspecified |
| scaffold27588 |
39759 |
39901 |
- |
RS718 |
Unspecified |
| scaffold27588 |
39973 |
40037 |
+ |
(ACATTCA)n |
Simple_repeat |
| scaffold27588 |
40188 |
40218 |
+ |
(AACT)n |
Simple_repeat |
| scaffold27588 |
40609 |
40638 |
+ |
(AATC)n |
Simple_repeat |
| scaffold27588 |
41379 |
41415 |
+ |
(CAAGTGT)n |
Simple_repeat |
| scaffold27588 |
42568 |
42614 |
+ |
(TTTTTTTTTA)n |
Simple_repeat |
| scaffold27588 |
44999 |
45021 |
+ |
(T)n |
Simple_repeat |
| scaffold27588 |
51341 |
51539 |
+ |
PL385 |
Unspecified |
| scaffold27588 |
51634 |
51746 |
+ |
RS1277 |
Unspecified |
| scaffold27588 |
51741 |
51809 |
+ |
PL513 |
Unspecified |
| scaffold27588 |
51863 |
51899 |
+ |
(TATTTT)n |
Simple_repeat |
| scaffold27588 |
52224 |
52250 |
+ |
(A)n |
Simple_repeat |
| scaffold27588 |
54513 |
54545 |
+ |
(TGAATT)n |
Simple_repeat |
| scaffold27588 |
54623 |
54690 |
+ |
GA-rich |
Low_complexity |
| scaffold27588 |
59339 |
59526 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold27588 |
60498 |
60542 |
+ |
RS506 |
Unspecified |
| scaffold27588 |
60543 |
60620 |
- |
RS163 |
Unspecified |
| scaffold27588 |
60653 |
60785 |
+ |
RS12743 |
Unspecified |
| scaffold27588 |
60881 |
60917 |
+ |
A-rich |
Low_complexity |
| scaffold27588 |
61472 |
61752 |
- |
RS16888 |
Unspecified |
| scaffold27588 |
62013 |
62079 |
+ |
(AATTAT)n |
Simple_repeat |
| scaffold27588 |
62174 |
62220 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold27588 |
62394 |
62423 |
+ |
A-rich |
Low_complexity |
| scaffold27588 |
63333 |
63422 |
- |
PL396 |
Unspecified |
| scaffold27588 |
63682 |
63804 |
- |
RS170 |
Unspecified |
| scaffold27588 |
63983 |
64023 |
+ |
(ACC)n |
Simple_repeat |
| scaffold27588 |
64603 |
64887 |
+ |
RS1095 |
Unspecified |
| scaffold27588 |
64971 |
64988 |
+ |
(TTAATAA)n |
Simple_repeat |
| scaffold27588 |
64989 |
65018 |
+ |
(AATT)n |
Simple_repeat |
| scaffold27588 |
65648 |
65827 |
- |
RS18 |
Unspecified |
| scaffold27588 |
65737 |
65857 |
- |
RS12254 |
Unspecified |
| scaffold27588 |
66351 |
66445 |
+ |
RS1 |
Unspecified |
| scaffold27588 |
66939 |
67060 |
+ |
RS8125 |
Unspecified |
| scaffold27588 |
66958 |
67076 |
- |
RS12254 |
Unspecified |
| scaffold27588 |
71289 |
71314 |
+ |
(T)n |
Simple_repeat |
| scaffold27588 |
74105 |
74125 |
+ |
(ATCT)n |
Simple_repeat |
| scaffold27588 |
74336 |
74381 |
+ |
(AATCAA)n |
Simple_repeat |
| scaffold27588 |
74484 |
74521 |
+ |
(GAT)n |
Simple_repeat |
| scaffold27588 |
74563 |
74593 |
+ |
(TTG)n |
Simple_repeat |
| scaffold27588 |
74692 |
74729 |
+ |
(T)n |
Simple_repeat |
| scaffold27588 |
75601 |
75621 |
+ |
(A)n |
Simple_repeat |
| scaffold27588 |
75677 |
75721 |
+ |
A-rich |
Low_complexity |
| scaffold27588 |
83089 |
83163 |
- |
PL466 |
Unspecified |
| scaffold27588 |
83095 |
83161 |
+ |
PL855 |
Unspecified |
| scaffold27588 |
83097 |
83172 |
+ |
PL257 |
Unspecified |
| scaffold27588 |
83204 |
83243 |
+ |
A-rich |
Low_complexity |
| scaffold27588 |
83526 |
83558 |
+ |
RTE-1_TD |
LINE/RTE-BovB |
| scaffold27588 |
84512 |
84556 |
+ |
A-rich |
Low_complexity |
| scaffold27588 |
85655 |
85681 |
+ |
(A)n |
Simple_repeat |
| scaffold27588 |
85950 |
86048 |
- |
RS10 |
Unspecified |
| scaffold27588 |
89759 |
89796 |
+ |
(T)n |
Simple_repeat |
| scaffold27588 |
89797 |
89811 |
+ |
(TCTCTTG)n |
Simple_repeat |
| scaffold27588 |
90268 |
90592 |
+ |
RS1716 |
Unspecified |
| scaffold27588 |
90607 |
90857 |
+ |
RS992 |
Unspecified |
| scaffold27588 |
90858 |
91271 |
- |
RS1675 |
Unspecified |
| scaffold27588 |
91393 |
91493 |
- |
RS4569 |
Unspecified |
| scaffold27588 |
91479 |
91569 |
- |
RS1099 |
Unspecified |
| scaffold27588 |
91552 |
91608 |
- |
RS4569 |
Unspecified |
| scaffold27588 |
91932 |
92231 |
- |
RS1522 |
Unspecified |
| scaffold27588 |
91984 |
92596 |
- |
RS1619 |
Unspecified |
| scaffold27588 |
93711 |
93753 |
- |
RS979 |
Unspecified |
| scaffold27588 |
93752 |
94116 |
- |
RS979 |
Unspecified |
| scaffold27588 |
93842 |
94210 |
+ |
PL447 |
Unspecified |
| scaffold27588 |
94311 |
94704 |
+ |
RS992 |
Unspecified |
| scaffold27588 |
94594 |
94829 |
+ |
RS5602 |
Unspecified |
| scaffold27588 |
94698 |
94851 |
- |
RS992 |
Unspecified |
| scaffold27588 |
95332 |
95369 |
+ |
(TTTTTA)n |
Simple_repeat |
| scaffold27588 |
95748 |
95803 |
+ |
RS9584 |
Unspecified |
| scaffold27588 |
97565 |
97587 |
+ |
(CTTC)n |
Simple_repeat |
| scaffold27588 |
98211 |
98236 |
+ |
(T)n |
Simple_repeat |
| scaffold27588 |
98371 |
98753 |
+ |
RS1931 |
Unspecified |
| scaffold27588 |
100587 |
100699 |
+ |
RS8753 |
Unspecified |
| scaffold27588 |
100942 |
100992 |
+ |
(ATTTC)n |
Simple_repeat |
| scaffold27588 |
101161 |
101233 |
+ |
(TTTGAT)n |
Simple_repeat |
| scaffold27588 |
101364 |
103395 |
- |
Copia-2_SL-I |
LTR/Copia |
| scaffold27588 |
103396 |
103786 |
+ |
RS1931 |
Unspecified |
| scaffold27588 |
105620 |
105732 |
+ |
RS8753 |
Unspecified |
| scaffold27588 |
105975 |
106025 |
+ |
(ATTTC)n |
Simple_repeat |
| scaffold27588 |
106194 |
106266 |
+ |
(TTTGAT)n |
Simple_repeat |
| scaffold27588 |
107225 |
107259 |
+ |
A-rich |
Low_complexity |
| scaffold27588 |
107382 |
107424 |
+ |
(AGATGA)n |
Simple_repeat |
| scaffold27588 |
107624 |
108496 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold27588 |
108949 |
109932 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold27588 |
111376 |
111487 |
- |
RS8753 |
Unspecified |
| scaffold27588 |
112126 |
112329 |
+ |
RS5285 |
Unspecified |
| scaffold27588 |
112392 |
112510 |
+ |
(TTCGTC)n |
Simple_repeat |
| scaffold27588 |
112735 |
113565 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold27588 |
113902 |
113976 |
+ |
Copia-3_ST-I |
LTR/Copia |
| scaffold27588 |
114430 |
115195 |
+ |
Copia-3_ST-I |
LTR/Copia |
| scaffold27588 |
115394 |
115537 |
+ |
RS9469 |
Unspecified |
| scaffold27588 |
115616 |
117235 |
+ |
Copia-30_ST-I |
LTR/Copia |
| scaffold27588 |
117254 |
117457 |
+ |
RS5285 |
Unspecified |
| scaffold27588 |
118659 |
118887 |
+ |
RS3094 |
Unspecified |
| scaffold27588 |
119554 |
119580 |
+ |
A-rich |
Low_complexity |
| scaffold27588 |
120089 |
120262 |
- |
RS133 |
Unspecified |
| scaffold27588 |
120621 |
120657 |
+ |
(TTTATAA)n |
Simple_repeat |
| scaffold27588 |
120661 |
120713 |
+ |
A-rich |
Low_complexity |
| scaffold27588 |
121183 |
121290 |
+ |
RS17927 |
Unspecified |
| scaffold27588 |
121286 |
121361 |
+ |
(A)n |
Simple_repeat |
| scaffold27588 |
122947 |
122978 |
+ |
A-rich |
Low_complexity |
| scaffold27588 |
123000 |
123182 |
- |
RS4164 |
Unspecified |
| scaffold27588 |
123126 |
123406 |
+ |
RS595 |
Unspecified |
| scaffold27588 |
123969 |
124061 |
- |
RS7486 |
Unspecified |
| scaffold27588 |
125728 |
125843 |
- |
PL93 |
Unspecified |
| scaffold27588 |
126267 |
126306 |
+ |
(TTGTTTT)n |
Simple_repeat |
| scaffold27588 |
126401 |
126458 |
+ |
(TGAT)n |
Simple_repeat |
| scaffold27588 |
126573 |
126596 |
+ |
(T)n |
Simple_repeat |
| scaffold27588 |
127984 |
128100 |
+ |
RS4302 |
Unspecified |
| scaffold27588 |
128212 |
128296 |
+ |
RS726 |
Unspecified |
| scaffold27588 |
129362 |
129393 |
+ |
(T)n |
Simple_repeat |
| scaffold27588 |
134170 |
134208 |
+ |
(AGTTC)n |
Simple_repeat |
| scaffold27588 |
134652 |
135270 |
- |
PL386 |
Unspecified |
| scaffold27588 |
135302 |
135563 |
- |
Gypsy-18_ST-I |
LTR/Gypsy |
| scaffold27588 |
135636 |
137851 |
- |
Gypsy-18_ST-I |
LTR/Gypsy |
| scaffold27588 |
137890 |
138180 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold27588 |
138379 |
138669 |
- |
LTR2-ZM_LTR |
LTR |