scaffold2780 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold2780 |
611 |
646 |
+ |
(AAT)n |
Simple_repeat |
| scaffold2780 |
886 |
920 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold2780 |
1410 |
1436 |
+ |
(AATTT)n |
Simple_repeat |
| scaffold2780 |
1437 |
1491 |
+ |
(TTACAA)n |
Simple_repeat |
| scaffold2780 |
1492 |
1509 |
+ |
(AATTT)n |
Simple_repeat |
| scaffold2780 |
2003 |
2167 |
- |
RS8167 |
Unspecified |
| scaffold2780 |
2262 |
2323 |
+ |
(TTTTAG)n |
Simple_repeat |
| scaffold2780 |
2262 |
2504 |
+ |
(TTTTAG)n |
Simple_repeat |
| scaffold2780 |
2312 |
2504 |
- |
RS10 |
Unspecified |
| scaffold2780 |
2941 |
3193 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold2780 |
3592 |
3625 |
+ |
(TCAACA)n |
Simple_repeat |
| scaffold2780 |
3628 |
3776 |
- |
RS11418 |
Unspecified |
| scaffold2780 |
4272 |
4536 |
- |
RS106 |
Unspecified |
| scaffold2780 |
6025 |
6084 |
+ |
(A)n |
Simple_repeat |
| scaffold2780 |
6283 |
6308 |
+ |
(A)n |
Simple_repeat |
| scaffold2780 |
6323 |
6408 |
+ |
RS3465 |
Unspecified |
| scaffold2780 |
9090 |
9121 |
+ |
(TATCA)n |
Simple_repeat |
| scaffold2780 |
10063 |
10132 |
+ |
PL242 |
Unspecified |
| scaffold2780 |
10106 |
10286 |
+ |
PL831 |
Unspecified |
| scaffold2780 |
10288 |
10472 |
- |
PL3 |
Unspecified |
| scaffold2780 |
10464 |
10635 |
- |
PL3 |
Unspecified |
| scaffold2780 |
10630 |
10815 |
- |
PL28 |
Unspecified |
| scaffold2780 |
11815 |
11921 |
+ |
RS8396 |
Unspecified |
| scaffold2780 |
12869 |
12917 |
+ |
A-rich |
Low_complexity |
| scaffold2780 |
13016 |
13041 |
+ |
(A)n |
Simple_repeat |
| scaffold2780 |
13247 |
13272 |
+ |
(TTTCT)n |
Simple_repeat |
| scaffold2780 |
13632 |
13661 |
+ |
(TTCT)n |
Simple_repeat |
| scaffold2780 |
13865 |
13930 |
+ |
(TTA)n |
Simple_repeat |
| scaffold2780 |
14195 |
14247 |
+ |
(ATT)n |
Simple_repeat |
| scaffold2780 |
14334 |
14410 |
+ |
(TTATAT)n |
Simple_repeat |
| scaffold2780 |
14433 |
14475 |
+ |
(A)n |
Simple_repeat |
| scaffold2780 |
14675 |
14882 |
+ |
(T)n |
Simple_repeat |
| scaffold2780 |
14675 |
14699 |
+ |
(T)n |
Simple_repeat |
| scaffold2780 |
14696 |
14882 |
+ |
PL385 |
Unspecified |
| scaffold2780 |
15916 |
15935 |
+ |
(T)n |
Simple_repeat |
| scaffold2780 |
16209 |
16236 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold2780 |
18970 |
19227 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold2780 |
23179 |
23215 |
+ |
A-rich |
Low_complexity |
| scaffold2780 |
24281 |
24334 |
+ |
GA-rich |
Low_complexity |
| scaffold2780 |
24640 |
24771 |
+ |
RS1658 |
Unspecified |
| scaffold2780 |
24872 |
25186 |
- |
RS918 |
Unspecified |
| scaffold2780 |
25503 |
25531 |
+ |
(CAATC)n |
Simple_repeat |
| scaffold2780 |
25937 |
26051 |
- |
RS5693 |
Unspecified |
| scaffold2780 |
26256 |
26299 |
+ |
A-rich |
Low_complexity |
| scaffold2780 |
27068 |
27105 |
+ |
A-rich |
Low_complexity |
| scaffold2780 |
27606 |
28023 |
+ |
RS1337 |
Unspecified |
| scaffold2780 |
32040 |
32076 |
+ |
(TTGTGG)n |
Simple_repeat |
| scaffold2780 |
35070 |
35093 |
+ |
(A)n |
Simple_repeat |
| scaffold2780 |
35186 |
35218 |
+ |
(GTT)n |
Simple_repeat |
| scaffold2780 |
35424 |
35447 |
+ |
(T)n |
Simple_repeat |
| scaffold2780 |
35817 |
35958 |
- |
PL754 |
Unspecified |
| scaffold2780 |
35848 |
35948 |
+ |
RS4475 |
Unspecified |
| scaffold2780 |
36631 |
36894 |
- |
RS10 |
Unspecified |
| scaffold2780 |
37949 |
38018 |
- |
HAT-N10_Mad |
DNA/hAT-Ac |
| scaffold2780 |
38178 |
38321 |
- |
RS115 |
Unspecified |
| scaffold2780 |
41825 |
41924 |
+ |
RS972 |
Unspecified |
| scaffold2780 |
42406 |
42447 |
+ |
(ATAT)n |
Simple_repeat |
| scaffold2780 |
42646 |
42670 |
+ |
(AT)n |
Simple_repeat |
| scaffold2780 |
43065 |
43091 |
+ |
(A)n |
Simple_repeat |
| scaffold2780 |
44310 |
44340 |
+ |
(TTAATA)n |
Simple_repeat |
| scaffold2780 |
44364 |
44646 |
+ |
RS1155 |
Unspecified |
| scaffold2780 |
44531 |
44736 |
+ |
RS9061 |
Unspecified |
| scaffold2780 |
44906 |
44949 |
+ |
(T)n |
Simple_repeat |
| scaffold2780 |
45072 |
45100 |
- |
LT1_EPa |
LTR? |
| scaffold2780 |
45209 |
45239 |
+ |
(TTAATA)n |
Simple_repeat |
| scaffold2780 |
45323 |
45385 |
+ |
(TTGTAA)n |
Simple_repeat |
| scaffold2780 |
45382 |
45421 |
+ |
(TTACAA)n |
Simple_repeat |
| scaffold2780 |
45508 |
45524 |
+ |
(A)n |
Simple_repeat |
| scaffold2780 |
46799 |
46827 |
+ |
(T)n |
Simple_repeat |
| scaffold2780 |
47244 |
47480 |
- |
RS41 |
Unspecified |
| scaffold2780 |
47606 |
47821 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold2780 |
48135 |
48363 |
- |
RS82 |
Unspecified |
| scaffold2780 |
48542 |
48684 |
- |
RS8617 |
Unspecified |
| scaffold2780 |
48719 |
48800 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold2780 |
48894 |
49006 |
+ |
(A)n |
Simple_repeat |
| scaffold2780 |
49285 |
49323 |
+ |
(TTTTAA)n |
Simple_repeat |
| scaffold2780 |
49460 |
49481 |
+ |
(AAG)n |
Simple_repeat |
| scaffold2780 |
51788 |
51839 |
+ |
(AT)n |
Simple_repeat |
| scaffold2780 |
53151 |
53177 |
+ |
(AAC)n |
Simple_repeat |
| scaffold2780 |
57297 |
57329 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold2780 |
57567 |
57657 |
+ |
(ATT)n |
Simple_repeat |
| scaffold2780 |
57572 |
57597 |
+ |
(T)n |
Simple_repeat |
| scaffold2780 |
57653 |
57707 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold2780 |
57860 |
57901 |
+ |
(CAATT)n |
Simple_repeat |
| scaffold2780 |
58057 |
58125 |
+ |
A-rich |
Low_complexity |
| scaffold2780 |
58154 |
58208 |
+ |
A-rich |
Low_complexity |
| scaffold2780 |
58914 |
58954 |
+ |
RS16604 |
Unspecified |
| scaffold2780 |
58919 |
58975 |
+ |
RS16604 |
Unspecified |
| scaffold2780 |
58920 |
59003 |
+ |
RS17638 |
Unspecified |
| scaffold2780 |
59709 |
59860 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold2780 |
60115 |
60172 |
+ |
(TT)n |
Simple_repeat |
| scaffold2780 |
60356 |
61333 |
- |
Copia-82_GM-I |
LTR/Copia |
| scaffold2780 |
61587 |
61683 |
+ |
RS4475 |
Unspecified |
| scaffold2780 |
62851 |
62888 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold2780 |
63050 |
63314 |
- |
RS356 |
Unspecified |
| scaffold2780 |
63282 |
63323 |
+ |
RS16836 |
Unspecified |
| scaffold2780 |
64002 |
64040 |
+ |
RS972 |
Unspecified |
| scaffold2780 |
65109 |
65144 |
+ |
(AAT)n |
Simple_repeat |
| scaffold2780 |
65234 |
65265 |
+ |
(TAAC)n |
Simple_repeat |
| scaffold2780 |
65408 |
65544 |
+ |
Copia-33_GM-I |
LTR |
| scaffold2780 |
67902 |
68027 |
+ |
RS2057 |
Unspecified |
| scaffold2780 |
68277 |
68339 |
+ |
(ATAATAA)n |
Simple_repeat |
| scaffold2780 |
69517 |
69543 |
+ |
(GATAT)n |
Simple_repeat |
| scaffold2780 |
75020 |
75059 |
+ |
(ATGTT)n |
Simple_repeat |
| scaffold2780 |
75198 |
75249 |
+ |
GA-rich |
Low_complexity |
| scaffold2780 |
76213 |
76249 |
+ |
A-rich |
Low_complexity |
| scaffold2780 |
76314 |
76330 |
+ |
(T)n |
Simple_repeat |
| scaffold2780 |
76973 |
77039 |
+ |
RS8762 |
Unspecified |
| scaffold2780 |
83250 |
83315 |
+ |
RS1857 |
Unspecified |
| scaffold2780 |
83462 |
83502 |
+ |
(TTTCAA)n |
Simple_repeat |
| scaffold2780 |
85874 |
85949 |
+ |
RS14512 |
Unspecified |
| scaffold2780 |
85997 |
86106 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold2780 |
86665 |
86740 |
+ |
(T)n |
Simple_repeat |
| scaffold2780 |
87168 |
87244 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold2780 |
89705 |
89793 |
+ |
(ACTACTT)n |
Simple_repeat |
| scaffold2780 |
90143 |
90209 |
+ |
(AAT)n |
Simple_repeat |
| scaffold2780 |
90410 |
90478 |
+ |
(TT)n |
Simple_repeat |
| scaffold2780 |
90764 |
90790 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold2780 |
90929 |
91028 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold2780 |
91015 |
91068 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold2780 |
92603 |
92636 |
+ |
A-rich |
Low_complexity |
| scaffold2780 |
93406 |
93430 |
+ |
(T)n |
Simple_repeat |
| scaffold2780 |
94572 |
94579 |
+ |
(TAAAAAA)n |
Simple_repeat |
| scaffold2780 |
94580 |
94612 |
+ |
(A)n |
Simple_repeat |
| scaffold2780 |
96914 |
96932 |
+ |
(CAT)n |
Simple_repeat |
| scaffold2780 |
98367 |
98417 |
+ |
(ATCA)n |
Simple_repeat |
| scaffold2780 |
99082 |
99178 |
+ |
RS16382 |
Unspecified |
| scaffold2780 |
101199 |
101216 |
+ |
(A)n |
Simple_repeat |
| scaffold2780 |
102243 |
102375 |
- |
TRAMET1 |
DNA/TcMar-Stowaway |
| scaffold2780 |
102973 |
103017 |
+ |
(A)n |
Simple_repeat |
| scaffold2780 |
103152 |
103192 |
+ |
(AT)n |
Simple_repeat |
| scaffold2780 |
104556 |
104657 |
- |
RS6320 |
Unspecified |
| scaffold2780 |
104581 |
104675 |
+ |
PL436 |
Unspecified |
| scaffold2780 |
104653 |
105179 |
+ |
PL96 |
Unspecified |
| scaffold2780 |
105423 |
105445 |
+ |
(T)n |
Simple_repeat |
| scaffold2780 |
105628 |
105795 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold2780 |
106611 |
106651 |
- |
GypsO_I-int |
LTR/Gypsy |
| scaffold2780 |
106823 |
106841 |
+ |
(A)n |
Simple_repeat |
| scaffold2780 |
109857 |
109956 |
+ |
A-rich |
Low_complexity |
| scaffold2780 |
111896 |
113293 |
- |
RS259 |
Unspecified |
| scaffold2780 |
113559 |
113591 |
+ |
(T)n |
Simple_repeat |
| scaffold2780 |
114642 |
114754 |
- |
RS10724 |
Unspecified |
| scaffold2780 |
114657 |
114762 |
- |
RS5132 |
Unspecified |
| scaffold2780 |
115229 |
115302 |
+ |
RS5 |
Unspecified |
| scaffold2780 |
115301 |
115371 |
+ |
RS5 |
Unspecified |
| scaffold2780 |
115394 |
115482 |
- |
RS18111 |
Unspecified |
| scaffold2780 |
115404 |
115483 |
+ |
RS727 |
Unspecified |
| scaffold2780 |
118343 |
118396 |
+ |
(CCGCCG)n |
Simple_repeat |
| scaffold2780 |
118569 |
118615 |
+ |
(TTG)n |
Simple_repeat |
| scaffold2780 |
118603 |
118661 |
+ |
(TGA)n |
Simple_repeat |
| scaffold2780 |
118709 |
118770 |
+ |
(ATTTTTA)n |
Simple_repeat |
| scaffold2780 |
119225 |
119320 |
- |
RS3146 |
Unspecified |
| scaffold2780 |
119231 |
119351 |
+ |
RS15113 |
Unspecified |
| scaffold2780 |
120145 |
120184 |
+ |
(TTTAAT)n |
Simple_repeat |
| scaffold2780 |
120226 |
120271 |
+ |
A-rich |
Low_complexity |
| scaffold2780 |
120319 |
120437 |
+ |
(TATATC)n |
Simple_repeat |
| scaffold2780 |
120319 |
120542 |
+ |
(TATATC)n |
Simple_repeat |
| scaffold2780 |
120399 |
120542 |
- |
RS311 |
Unspecified |
| scaffold2780 |
120945 |
121036 |
+ |
RS9996 |
Unspecified |
| scaffold2780 |
121925 |
122058 |
- |
RS10357 |
Unspecified |
| scaffold2780 |
122587 |
122677 |
+ |
RS3225 |
Unspecified |
| scaffold2780 |
122618 |
122785 |
+ |
RS10832 |
Unspecified |
| scaffold2780 |
123691 |
123795 |
+ |
(TGATTT)n |
Simple_repeat |
| scaffold2780 |
124351 |
124424 |
+ |
(CTGTCG)n |
Simple_repeat |
| scaffold2780 |
124603 |
124780 |
- |
RS3443 |
Unspecified |
| scaffold2780 |
124855 |
125104 |
+ |
RS3732 |
Unspecified |
| scaffold2780 |
124993 |
125136 |
+ |
RS5946 |
Unspecified |
| scaffold2780 |
125014 |
125193 |
+ |
RS10614 |
Unspecified |
| scaffold2780 |
125724 |
125753 |
+ |
(A)n |
Simple_repeat |
| scaffold2780 |
125864 |
126048 |
+ |
RS17805 |
Unspecified |
| scaffold2780 |
126166 |
126184 |
+ |
(CTT)n |
Simple_repeat |
| scaffold2780 |
127031 |
127142 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold2780 |
129584 |
129640 |
+ |
RS972 |
Unspecified |
| scaffold2780 |
129647 |
129801 |
+ |
RS1714 |
Unspecified |
| scaffold2780 |
129803 |
129880 |
- |
PL169 |
Unspecified |
| scaffold2780 |
129878 |
130212 |
+ |
PL296 |
Unspecified |
| scaffold2780 |
130449 |
130519 |
+ |
(TTATGT)n |
Simple_repeat |
| scaffold2780 |
132082 |
132208 |
- |
PL169 |
Unspecified |
| scaffold2780 |
132836 |
132885 |
+ |
(AT)n |
Simple_repeat |
| scaffold2780 |
133262 |
133327 |
+ |
(TTAATTA)n |
Simple_repeat |
| scaffold2780 |
133453 |
133656 |
- |
RS5718 |
Unspecified |
| scaffold2780 |
133612 |
133734 |
- |
RS5718 |
Unspecified |
| scaffold2780 |
133664 |
134354 |
- |
RS3094 |
Unspecified |
| scaffold2780 |
134683 |
134794 |
- |
RS13348 |
Unspecified |