scaffold27975 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold27975 |
495 |
551 |
+ |
Gypsy-LTR_MT |
LTR/Gypsy |
| scaffold27975 |
678 |
1667 |
- |
PL888 |
Unspecified |
| scaffold27975 |
756 |
797 |
+ |
(AAGCAA)n |
Simple_repeat |
| scaffold27975 |
3873 |
3951 |
+ |
(TT)n |
Simple_repeat |
| scaffold27975 |
4676 |
4841 |
+ |
RS1031 |
Unspecified |
| scaffold27975 |
4706 |
4843 |
- |
RS10743 |
Unspecified |
| scaffold27975 |
4890 |
5098 |
+ |
RS9895 |
Unspecified |
| scaffold27975 |
4915 |
5269 |
+ |
RS3061 |
Unspecified |
| scaffold27975 |
5849 |
5879 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold27975 |
7250 |
7467 |
- |
RS242 |
Unspecified |
| scaffold27975 |
7458 |
7885 |
+ |
PL554 |
Unspecified |
| scaffold27975 |
7878 |
8494 |
+ |
PL894 |
Unspecified |
| scaffold27975 |
9499 |
9561 |
+ |
A-rich |
Low_complexity |
| scaffold27975 |
11992 |
12295 |
+ |
Gypsy-133_GM-I |
LTR/Gypsy |
| scaffold27975 |
12298 |
12659 |
+ |
PL620 |
Unspecified |
| scaffold27975 |
12660 |
13075 |
+ |
PL752 |
Unspecified |
| scaffold27975 |
12704 |
13631 |
- |
PL568 |
Unspecified |
| scaffold27975 |
13624 |
13889 |
- |
PL111 |
Unspecified |
| scaffold27975 |
13922 |
14668 |
+ |
PL697 |
Unspecified |
| scaffold27975 |
14703 |
15314 |
+ |
Copia26-VV_I-int |
LTR/Copia |
| scaffold27975 |
15415 |
15532 |
+ |
Copia26-VV_I-int |
LTR/Copia |
| scaffold27975 |
15843 |
16690 |
+ |
RS419 |
Unspecified |
| scaffold27975 |
17431 |
17457 |
+ |
(T)n |
Simple_repeat |
| scaffold27975 |
17673 |
18009 |
+ |
RS1963 |
Unspecified |
| scaffold27975 |
18038 |
18089 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold27975 |
18243 |
18277 |
+ |
(ATTATT)n |
Simple_repeat |
| scaffold27975 |
18581 |
18612 |
+ |
(TTTATT)n |
Simple_repeat |
| scaffold27975 |
18965 |
18998 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold27975 |
19609 |
19778 |
- |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold27975 |
19949 |
20027 |
+ |
A-rich |
Low_complexity |
| scaffold27975 |
20981 |
21030 |
+ |
(TATGA)n |
Simple_repeat |
| scaffold27975 |
21120 |
21629 |
+ |
RS8868 |
Unspecified |
| scaffold27975 |
21790 |
21862 |
- |
RS3649 |
Unspecified |
| scaffold27975 |
21864 |
21936 |
+ |
(CTTATATG)n |
Simple_repeat |
| scaffold27975 |
22457 |
22477 |
+ |
(A)n |
Simple_repeat |
| scaffold27975 |
22476 |
22843 |
- |
RS1267 |
Unspecified |
| scaffold27975 |
22895 |
23088 |
+ |
RS761 |
Unspecified |
| scaffold27975 |
23563 |
23655 |
+ |
(TTTGT)n |
Simple_repeat |
| scaffold27975 |
24758 |
24905 |
+ |
RS2750 |
Unspecified |
| scaffold27975 |
27636 |
27785 |
+ |
MUMT |
DNA/MULE-MuDR |
| scaffold27975 |
27966 |
28535 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold27975 |
27996 |
28247 |
+ |
MUMT |
DNA/MULE-MuDR |
| scaffold27975 |
30886 |
31141 |
- |
RS1958 |
Unspecified |
| scaffold27975 |
34505 |
34579 |
+ |
(AATTG)n |
Simple_repeat |
| scaffold27975 |
34942 |
35005 |
+ |
(TTC)n |
Simple_repeat |
| scaffold27975 |
35148 |
35188 |
+ |
(TTTATT)n |
Simple_repeat |
| scaffold27975 |
38519 |
38564 |
+ |
(T)n |
Simple_repeat |
| scaffold27975 |
41053 |
41159 |
- |
RS26 |
Unspecified |
| scaffold27975 |
41172 |
41553 |
+ |
RS160 |
Unspecified |
| scaffold27975 |
41627 |
41645 |
+ |
(AG)n |
Simple_repeat |
| scaffold27975 |
41657 |
41677 |
+ |
(TTCT)n |
Simple_repeat |
| scaffold27975 |
42380 |
42653 |
- |
RS6427 |
Unspecified |
| scaffold27975 |
42594 |
42811 |
+ |
RS5873 |
Unspecified |
| scaffold27975 |
42838 |
43062 |
+ |
RS7369 |
Unspecified |
| scaffold27975 |
43036 |
43101 |
+ |
RS2615 |
Unspecified |
| scaffold27975 |
43059 |
43211 |
+ |
RS2239 |
Unspecified |
| scaffold27975 |
43105 |
43515 |
- |
RS2789 |
Unspecified |
| scaffold27975 |
45624 |
45959 |
+ |
RS3568 |
Unspecified |
| scaffold27975 |
45960 |
46144 |
- |
RS1649 |
Unspecified |
| scaffold27975 |
46667 |
46703 |
+ |
(CAAT)n |
Simple_repeat |
| scaffold27975 |
47792 |
47834 |
- |
PL141 |
Unspecified |
| scaffold27975 |
47829 |
48132 |
- |
PL855 |
Unspecified |
| scaffold27975 |
48115 |
48190 |
- |
PL257 |
Unspecified |
| scaffold27975 |
48124 |
48203 |
+ |
PL254 |
Unspecified |
| scaffold27975 |
48126 |
48192 |
- |
PL855 |
Unspecified |
| scaffold27975 |
48252 |
48274 |
+ |
(T)n |
Simple_repeat |
| scaffold27975 |
48308 |
48355 |
+ |
(TTGAAT)n |
Simple_repeat |
| scaffold27975 |
48486 |
48563 |
+ |
A-rich |
Low_complexity |
| scaffold27975 |
48859 |
48896 |
+ |
(T)n |
Simple_repeat |
| scaffold27975 |
49020 |
49137 |
+ |
RS972 |
Unspecified |
| scaffold27975 |
49242 |
49393 |
- |
RS10 |
Unspecified |
| scaffold27975 |
49633 |
49701 |
+ |
RS613 |
Unspecified |
| scaffold27975 |
54228 |
54261 |
+ |
(A)n |
Simple_repeat |
| scaffold27975 |
54549 |
54555 |
+ |
(TTTTTAG)n |
Simple_repeat |
| scaffold27975 |
54556 |
54591 |
+ |
(TATT)n |
Simple_repeat |
| scaffold27975 |
54925 |
55231 |
+ |
RS112 |
Unspecified |
| scaffold27975 |
55837 |
55928 |
+ |
A-rich |
Low_complexity |
| scaffold27975 |
56001 |
56210 |
- |
RS7510 |
Unspecified |
| scaffold27975 |
56505 |
56521 |
+ |
GA-rich |
Low_complexity |
| scaffold27975 |
56522 |
56605 |
+ |
A-rich |
Low_complexity |
| scaffold27975 |
56606 |
56633 |
+ |
GA-rich |
Low_complexity |
| scaffold27975 |
56706 |
56745 |
+ |
A-rich |
Low_complexity |
| scaffold27975 |
56817 |
56836 |
+ |
(ACC)n |
Simple_repeat |
| scaffold27975 |
57609 |
57731 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold27975 |
57733 |
57838 |
+ |
(ATT)n |
Simple_repeat |
| scaffold27975 |
59124 |
59714 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold27975 |
61023 |
61071 |
+ |
(ACACCA)n |
Simple_repeat |
| scaffold27975 |
61312 |
61407 |
+ |
(AAT)n |
Simple_repeat |
| scaffold27975 |
61436 |
61490 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold27975 |
62360 |
62433 |
+ |
(TAA)n |
Simple_repeat |
| scaffold27975 |
62749 |
62912 |
- |
ATENSPM4 |
DNA/CMC-EnSpm |
| scaffold27975 |
62840 |
62963 |
+ |
ATENSPM1A |
DNA/CMC-EnSpm |
| scaffold27975 |
63081 |
63102 |
+ |
(A)n |
Simple_repeat |
| scaffold27975 |
64414 |
64467 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold27975 |
64583 |
64758 |
+ |
RS1510 |
Unspecified |
| scaffold27975 |
64987 |
65195 |
- |
EnSpm2_PTr |
DNA/CMC-EnSpm |
| scaffold27975 |
65192 |
65281 |
+ |
PSL |
DNA/CMC-EnSpm |
| scaffold27975 |
65333 |
65708 |
- |
RS7491 |
Unspecified |
| scaffold27975 |
65710 |
65727 |
+ |
(T)n |
Simple_repeat |
| scaffold27975 |
66531 |
67892 |
- |
L1-5_STu |
LINE/L1 |
| scaffold27975 |
68084 |
68167 |
- |
L1-10_GM |
LINE/L1 |
| scaffold27975 |
68752 |
68810 |
- |
OSLINE1_1 |
LINE/L1 |
| scaffold27975 |
69084 |
69204 |
+ |
EnSpm-11_STu |
DNA/CMC-EnSpm |
| scaffold27975 |
70168 |
70433 |
+ |
PL623 |
Unspecified |
| scaffold27975 |
72229 |
72258 |
+ |
A-rich |
Low_complexity |