scaffold2841 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold2841 |
90 |
591 |
+ |
(T)n |
Simple_repeat |
| scaffold2841 |
90 |
164 |
+ |
(T)n |
Simple_repeat |
| scaffold2841 |
139 |
591 |
+ |
RS2409 |
Unspecified |
| scaffold2841 |
1125 |
1150 |
+ |
(A)n |
Simple_repeat |
| scaffold2841 |
1293 |
1330 |
+ |
A-rich |
Low_complexity |
| scaffold2841 |
1942 |
2176 |
- |
RS1244 |
Unspecified |
| scaffold2841 |
2094 |
2426 |
- |
RS817 |
Unspecified |
| scaffold2841 |
2423 |
2577 |
+ |
RS6459 |
Unspecified |
| scaffold2841 |
2736 |
3111 |
+ |
RS1689 |
Unspecified |
| scaffold2841 |
6568 |
6895 |
+ |
RS3403 |
Unspecified |
| scaffold2841 |
8284 |
8357 |
+ |
A-rich |
Low_complexity |
| scaffold2841 |
9672 |
10142 |
- |
PL686 |
Unspecified |
| scaffold2841 |
10576 |
10613 |
+ |
(GGTGGTC)n |
Simple_repeat |
| scaffold2841 |
10789 |
11067 |
- |
RS8598 |
Unspecified |
| scaffold2841 |
11280 |
11621 |
- |
RS12189 |
Unspecified |
| scaffold2841 |
11628 |
11662 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold2841 |
12105 |
12286 |
+ |
RS127 |
Unspecified |
| scaffold2841 |
13216 |
13245 |
+ |
(T)n |
Simple_repeat |
| scaffold2841 |
13660 |
13732 |
+ |
(AATGAA)n |
Simple_repeat |
| scaffold2841 |
14112 |
14124 |
+ |
A-rich |
Low_complexity |
| scaffold2841 |
14125 |
14159 |
+ |
(TTTCAA)n |
Simple_repeat |
| scaffold2841 |
14416 |
14452 |
+ |
(T)n |
Simple_repeat |
| scaffold2841 |
14947 |
14985 |
+ |
A-rich |
Low_complexity |
| scaffold2841 |
15306 |
15391 |
+ |
(ATTAT)n |
Simple_repeat |
| scaffold2841 |
15701 |
15736 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold2841 |
15766 |
15814 |
+ |
(TTATA)n |
Simple_repeat |
| scaffold2841 |
15842 |
16641 |
+ |
RS1494 |
Unspecified |
| scaffold2841 |
16849 |
16911 |
+ |
A-rich |
Low_complexity |
| scaffold2841 |
16964 |
17003 |
+ |
(ATATA)n |
Simple_repeat |
| scaffold2841 |
17223 |
17354 |
+ |
RS6712 |
Unspecified |
| scaffold2841 |
17443 |
17636 |
+ |
RS6712 |
Unspecified |
| scaffold2841 |
17722 |
17751 |
+ |
(TTTAAT)n |
Simple_repeat |
| scaffold2841 |
18124 |
18505 |
+ |
RS4035 |
Unspecified |
| scaffold2841 |
18799 |
19456 |
+ |
RS2491 |
Unspecified |
| scaffold2841 |
20245 |
20261 |
+ |
(T)n |
Simple_repeat |
| scaffold2841 |
20522 |
20730 |
+ |
RS4387 |
Unspecified |
| scaffold2841 |
20939 |
21029 |
+ |
(T)n |
Simple_repeat |
| scaffold2841 |
21080 |
21243 |
+ |
RS1733 |
Unspecified |
| scaffold2841 |
21164 |
21400 |
+ |
RS3371 |
Unspecified |
| scaffold2841 |
21501 |
21539 |
+ |
A-rich |
Low_complexity |
| scaffold2841 |
21683 |
21713 |
+ |
(CACCTG)n |
Simple_repeat |
| scaffold2841 |
22091 |
22116 |
+ |
(A)n |
Simple_repeat |
| scaffold2841 |
22183 |
22487 |
- |
Copia-101_GM-I |
LTR/Copia |
| scaffold2841 |
22634 |
22666 |
+ |
(A)n |
Simple_repeat |
| scaffold2841 |
23105 |
23565 |
- |
Copia-101_GM-I |
LTR/Copia |
| scaffold2841 |
24114 |
24765 |
+ |
COP12_I_MT-int |
LTR/Copia |
| scaffold2841 |
24843 |
24974 |
+ |
COP12_I_MT-int |
LTR/Copia |
| scaffold2841 |
25066 |
25109 |
+ |
COP12_I_MT-int |
LTR/Copia |
| scaffold2841 |
25218 |
25359 |
- |
RS881 |
Unspecified |
| scaffold2841 |
25233 |
26027 |
- |
RS881 |
Unspecified |
| scaffold2841 |
25712 |
26179 |
+ |
RS4787 |
Unspecified |
| scaffold2841 |
27065 |
27114 |
+ |
A-rich |
Low_complexity |
| scaffold2841 |
27154 |
27185 |
+ |
A-rich |
Low_complexity |
| scaffold2841 |
27402 |
27431 |
+ |
(TGTTT)n |
Simple_repeat |
| scaffold2841 |
27462 |
27487 |
+ |
(TTTTG)n |
Simple_repeat |
| scaffold2841 |
27796 |
29029 |
+ |
COP12_I_MT-int |
LTR/Copia |
| scaffold2841 |
29314 |
29796 |
+ |
COP12_I_MT-int |
LTR/Copia |
| scaffold2841 |
30922 |
30987 |
+ |
(GTCACTCA)n |
Simple_repeat |
| scaffold2841 |
32242 |
32272 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold2841 |
32568 |
32892 |
+ |
RS266 |
Unspecified |
| scaffold2841 |
32693 |
32946 |
+ |
RS1963 |
Unspecified |
| scaffold2841 |
33603 |
33635 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold2841 |
35197 |
35381 |
+ |
ATHILA-5_SBi-I |
LTR/Gypsy |
| scaffold2841 |
36386 |
36913 |
+ |
ATHILA-5_SBi-I |
LTR/Gypsy |
| scaffold2841 |
37660 |
37676 |
+ |
(A)n |
Simple_repeat |
| scaffold2841 |
37964 |
38005 |
+ |
Gypsy-10_Mad-I |
LTR/Gypsy |
| scaffold2841 |
38290 |
38331 |
+ |
Gypsy-10_Mad-I |
LTR/Gypsy |
| scaffold2841 |
38385 |
38439 |
+ |
A-rich |
Low_complexity |
| scaffold2841 |
38608 |
38644 |
+ |
(TTTGCTT)n |
Simple_repeat |
| scaffold2841 |
38628 |
38664 |
+ |
(TTTCGAC)n |
Simple_repeat |
| scaffold2841 |
38923 |
38963 |
+ |
A-rich |
Low_complexity |
| scaffold2841 |
39205 |
39254 |
+ |
Athila6B_I-int |
LTR/Gypsy |
| scaffold2841 |
39625 |
39856 |
+ |
PL50 |
Unspecified |
| scaffold2841 |
41355 |
41549 |
+ |
RS15500 |
Unspecified |
| scaffold2841 |
41370 |
41427 |
+ |
(GTAACT)n |
Simple_repeat |
| scaffold2841 |
42038 |
42072 |
+ |
(T)n |
Simple_repeat |
| scaffold2841 |
43326 |
43404 |
+ |
STOWAWAY14_SB |
DNA/TcMar-Stowaway |
| scaffold2841 |
44767 |
44802 |
+ |
(CAATACA)n |
Simple_repeat |
| scaffold2841 |
45631 |
45661 |
+ |
(T)n |
Simple_repeat |
| scaffold2841 |
46133 |
46170 |
+ |
(T)n |
Simple_repeat |
| scaffold2841 |
46416 |
46488 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold2841 |
46824 |
46857 |
+ |
(A)n |
Simple_repeat |
| scaffold2841 |
46986 |
47027 |
+ |
(TTAAAA)n |
Simple_repeat |
| scaffold2841 |
47873 |
47937 |
+ |
A-rich |
Low_complexity |
| scaffold2841 |
48494 |
48666 |
- |
RS8903 |
Unspecified |
| scaffold2841 |
48684 |
49062 |
- |
RS7062 |
Unspecified |
| scaffold2841 |
49259 |
49423 |
- |
RS8185 |
Unspecified |
| scaffold2841 |
49646 |
49914 |
+ |
RS13210 |
Unspecified |
| scaffold2841 |
49792 |
49958 |
+ |
RS3117 |
Unspecified |
| scaffold2841 |
50046 |
50071 |
+ |
(T)n |
Simple_repeat |
| scaffold2841 |
50322 |
50351 |
+ |
(T)n |
Simple_repeat |
| scaffold2841 |
51435 |
51471 |
+ |
(CAATCAA)n |
Simple_repeat |
| scaffold2841 |
52485 |
52517 |
+ |
(TATCTA)n |
Simple_repeat |
| scaffold2841 |
52619 |
52670 |
+ |
A-rich |
Low_complexity |
| scaffold2841 |
52775 |
53476 |
- |
RS520 |
Unspecified |
| scaffold2841 |
53400 |
53693 |
+ |
RS13405 |
Unspecified |
| scaffold2841 |
53470 |
53694 |
- |
RS10269 |
Unspecified |
| scaffold2841 |
54129 |
55515 |
- |
Gypsy22-ZM_I-int |
LTR/Gypsy |
| scaffold2841 |
55648 |
55701 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold2841 |
56114 |
56163 |
+ |
(AAC)n |
Simple_repeat |
| scaffold2841 |
58674 |
58754 |
+ |
(TGTTGC)n |
Simple_repeat |
| scaffold2841 |
59173 |
59275 |
- |
L1-4_VC |
LINE/L1 |
| scaffold2841 |
59938 |
60288 |
- |
L1-4_VC |
LINE/L1 |
| scaffold2841 |
59938 |
60050 |
- |
L1-4_VC |
LINE/L1 |
| scaffold2841 |
60036 |
60288 |
- |
RS2141 |
Unspecified |
| scaffold2841 |
60095 |
61027 |
- |
RS44 |
Unspecified |
| scaffold2841 |
61488 |
61549 |
- |
Gypsy-10_Pru-LTR |
LTR/Gypsy |
| scaffold2841 |
61711 |
61873 |
- |
PL88 |
Unspecified |
| scaffold2841 |
62112 |
62173 |
- |
Gypsy-10_Pru-LTR |
LTR/Gypsy |