scaffold2913 Repeat List
genome |
start |
end |
strand |
repeat-name |
repeat-class |
scaffold2913 |
1 |
485 |
+ |
RS562 |
Unspecified |
scaffold2913 |
474 |
884 |
+ |
RS562 |
Unspecified |
scaffold2913 |
2412 |
2650 |
+ |
RS1 |
Unspecified |
scaffold2913 |
2660 |
2687 |
+ |
(T)n |
Simple_repeat |
scaffold2913 |
2741 |
2772 |
+ |
(T)n |
Simple_repeat |
scaffold2913 |
3024 |
3070 |
+ |
A-rich |
Low_complexity |
scaffold2913 |
3140 |
3182 |
+ |
(T)n |
Simple_repeat |
scaffold2913 |
3458 |
3502 |
+ |
(TTGATGT)n |
Simple_repeat |
scaffold2913 |
3561 |
3585 |
+ |
(TATCG)n |
Simple_repeat |
scaffold2913 |
3956 |
4055 |
+ |
RS9031 |
Unspecified |
scaffold2913 |
4090 |
4200 |
- |
RS9717 |
Unspecified |
scaffold2913 |
4438 |
4539 |
- |
RS7670 |
Unspecified |
scaffold2913 |
5226 |
5245 |
+ |
(CA)n |
Simple_repeat |
scaffold2913 |
6309 |
6334 |
+ |
(T)n |
Simple_repeat |
scaffold2913 |
7094 |
7256 |
+ |
(TCGGG)n |
Simple_repeat |
scaffold2913 |
9512 |
9538 |
+ |
(AATAA)n |
Simple_repeat |
scaffold2913 |
10037 |
10303 |
- |
cacta |
cacta(TransposonPSI) |
scaffold2913 |
10949 |
11068 |
- |
RS6597 |
Unspecified |
scaffold2913 |
11559 |
11672 |
- |
RS8457 |
Unspecified |
scaffold2913 |
11835 |
12012 |
+ |
PL525 |
Unspecified |
scaffold2913 |
12506 |
12635 |
- |
RS682 |
Unspecified |
scaffold2913 |
13616 |
13735 |
- |
RS6597 |
Unspecified |
scaffold2913 |
14226 |
14339 |
- |
RS8457 |
Unspecified |
scaffold2913 |
19134 |
19197 |
+ |
RS22 |
Unspecified |
scaffold2913 |
19198 |
19254 |
+ |
RS18405 |
Unspecified |
scaffold2913 |
20007 |
20084 |
+ |
PL754 |
Unspecified |
scaffold2913 |
20078 |
20170 |
+ |
A-rich |
Low_complexity |
scaffold2913 |
20434 |
20534 |
- |
RS4475 |
Unspecified |
scaffold2913 |
20487 |
20555 |
- |
RS14717 |
Unspecified |
scaffold2913 |
20884 |
20909 |
+ |
(A)n |
Simple_repeat |
scaffold2913 |
21044 |
21083 |
+ |
(TTATT)n |
Simple_repeat |
scaffold2913 |
21114 |
21484 |
+ |
RS2656 |
Unspecified |
scaffold2913 |
21362 |
21541 |
- |
RS1166 |
Unspecified |
scaffold2913 |
21531 |
21866 |
- |
RS2656 |
Unspecified |
scaffold2913 |
22286 |
22313 |
+ |
(A)n |
Simple_repeat |
scaffold2913 |
22678 |
22712 |
+ |
A-rich |
Low_complexity |
scaffold2913 |
22857 |
23230 |
+ |
RS2656 |
Unspecified |
scaffold2913 |
23105 |
23287 |
- |
RS1166 |
Unspecified |
scaffold2913 |
23277 |
23618 |
- |
RS2656 |
Unspecified |
scaffold2913 |
24045 |
24068 |
+ |
(A)n |
Simple_repeat |
scaffold2913 |
24431 |
24463 |
+ |
A-rich |
Low_complexity |
scaffold2913 |
24669 |
25035 |
+ |
RS2656 |
Unspecified |
scaffold2913 |
25151 |
25189 |
+ |
A-rich |
Low_complexity |
scaffold2913 |
25344 |
25383 |
+ |
(TTAA)n |
Simple_repeat |
scaffold2913 |
25549 |
25571 |
+ |
(A)n |
Simple_repeat |
scaffold2913 |
25937 |
25969 |
+ |
A-rich |
Low_complexity |
scaffold2913 |
26044 |
26076 |
+ |
(ATTTT)n |
Simple_repeat |
scaffold2913 |
26144 |
26404 |
+ |
A-rich |
Low_complexity |
scaffold2913 |
26144 |
26175 |
+ |
A-rich |
Low_complexity |
scaffold2913 |
26171 |
26404 |
+ |
RS2656 |
Unspecified |
scaffold2913 |
26372 |
26446 |
+ |
RS2656 |
Unspecified |
scaffold2913 |
27336 |
27368 |
+ |
A-rich |
Low_complexity |
scaffold2913 |
27442 |
27471 |
+ |
(TTATT)n |
Simple_repeat |
scaffold2913 |
27513 |
27881 |
+ |
RS2656 |
Unspecified |
scaffold2913 |
27998 |
28037 |
+ |
A-rich |
Low_complexity |
scaffold2913 |
28357 |
28724 |
+ |
RS614 |
Unspecified |
scaffold2913 |
28859 |
28924 |
+ |
A-rich |
Low_complexity |
scaffold2913 |
29157 |
29232 |
- |
RS1891 |
Unspecified |
scaffold2913 |
29231 |
29247 |
+ |
(T)n |
Simple_repeat |
scaffold2913 |
29647 |
29679 |
+ |
A-rich |
Low_complexity |
scaffold2913 |
29886 |
30221 |
+ |
RS2656 |
Unspecified |
scaffold2913 |
30211 |
30388 |
+ |
RS1166 |
Unspecified |
scaffold2913 |
30268 |
30687 |
+ |
A-rich |
Low_complexity |
scaffold2913 |
30600 |
30687 |
+ |
A-rich |
Low_complexity |
scaffold2913 |
30757 |
30765 |
+ |
(ATTTGTT)n |
Simple_repeat |
scaffold2913 |
30766 |
30801 |
+ |
(TTTGA)n |
Simple_repeat |
scaffold2913 |
30863 |
31025 |
- |
RS3868 |
Unspecified |
scaffold2913 |
30959 |
31041 |
+ |
RS946 |
Unspecified |
scaffold2913 |
31153 |
31267 |
+ |
RS13643 |
Unspecified |
scaffold2913 |
31274 |
31427 |
+ |
RS1891 |
Unspecified |
scaffold2913 |
31544 |
31640 |
+ |
RS4475 |
Unspecified |
scaffold2913 |
31926 |
32017 |
+ |
(TTTA)n |
Simple_repeat |
scaffold2913 |
32113 |
32319 |
+ |
PL296 |
Unspecified |
scaffold2913 |
33617 |
33633 |
+ |
(A)n |
Simple_repeat |
scaffold2913 |
33823 |
34066 |
- |
RS4 |
Unspecified |
scaffold2913 |
37216 |
37234 |
+ |
(A)n |
Simple_repeat |
scaffold2913 |
38747 |
38776 |
+ |
(CTCCT)n |
Simple_repeat |
scaffold2913 |
39029 |
39128 |
+ |
A-rich |
Low_complexity |
scaffold2913 |
39149 |
39184 |
+ |
A-rich |
Low_complexity |
scaffold2913 |
39281 |
39328 |
+ |
(TAT)n |
Simple_repeat |
scaffold2913 |
39347 |
39373 |
+ |
A-rich |
Low_complexity |
scaffold2913 |
39978 |
40521 |
+ |
PL301 |
Unspecified |
scaffold2913 |
40801 |
40855 |
- |
RS1925 |
Unspecified |
scaffold2913 |
40881 |
41107 |
- |
RS970 |
Unspecified |
scaffold2913 |
41897 |
41913 |
+ |
(T)n |
Simple_repeat |
scaffold2913 |
42491 |
42529 |
+ |
(CATAT)n |
Simple_repeat |
scaffold2913 |
42765 |
42836 |
+ |
(AATTTTC)n |
Simple_repeat |
scaffold2913 |
42866 |
42891 |
+ |
(TTGAA)n |
Simple_repeat |
scaffold2913 |
43584 |
43722 |
+ |
RS579 |
Unspecified |
scaffold2913 |
43647 |
43732 |
- |
RS5193 |
Unspecified |
scaffold2913 |
44447 |
44464 |
+ |
(T)n |
Simple_repeat |
scaffold2913 |
44606 |
44627 |
+ |
(T)n |
Simple_repeat |
scaffold2913 |
49777 |
49816 |
+ |
A-rich |
Low_complexity |
scaffold2913 |
51063 |
51291 |
+ |
(ATG)n |
Simple_repeat |
scaffold2913 |
57712 |
57751 |
+ |
(T)n |
Simple_repeat |
scaffold2913 |
59773 |
59815 |
+ |
(TTGAG)n |
Simple_repeat |
scaffold2913 |
60091 |
60135 |
+ |
GA-rich |
Low_complexity |
scaffold2913 |
60689 |
60744 |
+ |
RS38 |
Unspecified |
scaffold2913 |
61763 |
61879 |
+ |
(A)n |
Simple_repeat |
scaffold2913 |
65765 |
65797 |
+ |
(AATC)n |
Simple_repeat |
scaffold2913 |
66714 |
66739 |
+ |
(AGA)n |
Simple_repeat |
scaffold2913 |
67084 |
67123 |
- |
HAT-N10_Mad |
DNA/hAT-Ac |
scaffold2913 |
67660 |
67730 |
- |
HAT-N10_Mad |
DNA/hAT-Ac |
scaffold2913 |
68196 |
68222 |
+ |
(A)n |
Simple_repeat |
scaffold2913 |
68498 |
68568 |
- |
CANDYSTRIPE1_SB |
DNA/CMC-EnSpm |
scaffold2913 |
71015 |
71046 |
- |
RS1271 |
Unspecified |
scaffold2913 |
71053 |
71085 |
+ |
(T)n |
Simple_repeat |
scaffold2913 |
71191 |
71244 |
+ |
(TTAA)n |
Simple_repeat |
scaffold2913 |
71234 |
71324 |
+ |
(ATTC)n |
Simple_repeat |
scaffold2913 |
71397 |
71456 |
+ |
(TT)n |
Simple_repeat |
scaffold2913 |
71512 |
71577 |
+ |
RS3574 |
Unspecified |
scaffold2913 |
72375 |
72463 |
+ |
(GAT)n |
Simple_repeat |
scaffold2913 |
72825 |
72929 |
+ |
MuDR-8_VV |
DNA/MULE-MuDR |
scaffold2913 |
74018 |
74055 |
+ |
(TTTAA)n |
Simple_repeat |
scaffold2913 |
74703 |
74752 |
+ |
RS555 |
Unspecified |
scaffold2913 |
75807 |
75830 |
+ |
(T)n |
Simple_repeat |
scaffold2913 |
75952 |
75996 |
+ |
A-rich |
Low_complexity |
scaffold2913 |
76142 |
76180 |
+ |
(AACTA)n |
Simple_repeat |
scaffold2913 |
78708 |
78724 |
+ |
(T)n |
Simple_repeat |
scaffold2913 |
86208 |
86266 |
- |
RS222 |
Unspecified |
scaffold2913 |
86303 |
86332 |
+ |
(CAAAA)n |
Simple_repeat |
scaffold2913 |
86456 |
86476 |
+ |
(T)n |
Simple_repeat |
scaffold2913 |
86906 |
86930 |
+ |
(GAT)n |
Simple_repeat |
scaffold2913 |
87089 |
87180 |
+ |
RS18 |
Unspecified |
scaffold2913 |
87821 |
87926 |
+ |
(TTA)n |
Simple_repeat |
scaffold2913 |
87993 |
88094 |
- |
RS9460 |
Unspecified |
scaffold2913 |
89852 |
89871 |
+ |
(TTTTGAC)n |
Simple_repeat |
scaffold2913 |
89872 |
89896 |
+ |
(T)n |
Simple_repeat |
scaffold2913 |
90076 |
90465 |
- |
RS539 |
Unspecified |
scaffold2913 |
90762 |
90817 |
+ |
(AGCTTTC)n |
Simple_repeat |
scaffold2913 |
91453 |
91504 |
+ |
(TTACTTT)n |
Simple_repeat |
scaffold2913 |
92123 |
92187 |
+ |
(TTAT)n |
Simple_repeat |
scaffold2913 |
92481 |
92536 |
- |
RS10 |
Unspecified |
scaffold2913 |
92617 |
92980 |
- |
RS8 |
Unspecified |
scaffold2913 |
94064 |
94109 |
+ |
(TTTTA)n |
Simple_repeat |
scaffold2913 |
94550 |
94597 |
+ |
(AAG)n |
Simple_repeat |
scaffold2913 |
94786 |
94830 |
+ |
A-rich |
Low_complexity |
scaffold2913 |
95508 |
95642 |
- |
RS2034 |
Unspecified |
scaffold2913 |
95635 |
95677 |
+ |
PL375 |
Unspecified |
scaffold2913 |
95761 |
95829 |
+ |
(AATT)n |
Simple_repeat |
scaffold2913 |
95865 |
95897 |
+ |
(T)n |
Simple_repeat |
scaffold2913 |
96183 |
96229 |
+ |
(T)n |
Simple_repeat |
scaffold2913 |
96234 |
96351 |
+ |
(TTA)n |
Simple_repeat |
scaffold2913 |
96275 |
96375 |
+ |
MUDRAVI1 |
DNA/MULE-MuDR |
scaffold2913 |
96352 |
96370 |
- |
EnSpm-34_SBi |
DNA/CMC-EnSpm |
scaffold2913 |
96422 |
96452 |
+ |
(GAAGAGA)n |
Simple_repeat |
scaffold2913 |
96510 |
96555 |
- |
PL201 |
Unspecified |
scaffold2913 |
96654 |
96844 |
- |
RS4380 |
Unspecified |
scaffold2913 |
96710 |
96890 |
- |
RS9954 |
Unspecified |
scaffold2913 |
96890 |
97084 |
+ |
PL93 |
Unspecified |
scaffold2913 |
97181 |
97242 |
+ |
(TTAA)n |
Simple_repeat |
scaffold2913 |
97385 |
97545 |
+ |
(GTG)n |
Simple_repeat |
scaffold2913 |
97553 |
97586 |
+ |
GA-rich |
Low_complexity |
scaffold2913 |
97687 |
97754 |
- |
RS9954 |
Unspecified |
scaffold2913 |
98287 |
98427 |
- |
RS2034 |
Unspecified |
scaffold2913 |
98556 |
98587 |
+ |
(TCT)n |
Simple_repeat |
scaffold2913 |
98600 |
98630 |
+ |
(T)n |
Simple_repeat |
scaffold2913 |
98905 |
98945 |
+ |
(TGTTC)n |
Simple_repeat |
scaffold2913 |
99401 |
99491 |
+ |
LTR-7_Mad-LTR |
LTR |
scaffold2913 |
99576 |
99613 |
- |
RS15154 |
Unspecified |
scaffold2913 |
99608 |
99694 |
- |
PL560 |
Unspecified |
scaffold2913 |
101931 |
101963 |
+ |
(T)n |
Simple_repeat |
scaffold2913 |
103526 |
103574 |
+ |
(GGT)n |
Simple_repeat |
scaffold2913 |
105197 |
105216 |
+ |
(T)n |
Simple_repeat |
scaffold2913 |
111894 |
111944 |
- |
hAT-2_STu |
DNA/hAT-Tag1 |
scaffold2913 |
112354 |
112382 |
+ |
(ATTTA)n |
Simple_repeat |
scaffold2913 |
112664 |
112709 |
+ |
G-rich |
Low_complexity |
scaffold2913 |
112716 |
112861 |
+ |
RS3521 |
Unspecified |
scaffold2913 |
112884 |
113148 |
- |
RS240 |
Unspecified |
scaffold2913 |
113940 |
113971 |
+ |
(CCGACG)n |
Simple_repeat |
scaffold2913 |
114151 |
114172 |
+ |
(GACA)n |
Simple_repeat |
scaffold2913 |
114199 |
114225 |
+ |
(T)n |
Simple_repeat |
scaffold2913 |
115298 |
115429 |
- |
RS17262 |
Unspecified |
scaffold2913 |
115305 |
115401 |
+ |
RS4475 |
Unspecified |
scaffold2913 |
115513 |
115804 |
+ |
RS1746 |
Unspecified |
scaffold2913 |
115586 |
115876 |
- |
RS1746 |
Unspecified |
scaffold2913 |
115884 |
116157 |
- |
RS898 |
Unspecified |
scaffold2913 |
116041 |
116172 |
+ |
RS4042 |
Unspecified |
scaffold2913 |
116839 |
117265 |
+ |
PL886 |
Unspecified |
scaffold2913 |
118885 |
119032 |
- |
RS407 |
Unspecified |
scaffold2913 |
119077 |
119094 |
+ |
(C)n |
Simple_repeat |
scaffold2913 |
119279 |
119378 |
+ |
Gypsy1-SB_I-int |
LTR/Gypsy |
scaffold2913 |
121218 |
121257 |
+ |
(CA)n |
Simple_repeat |
scaffold2913 |
123202 |
123236 |
+ |
(AAATC)n |
Simple_repeat |
scaffold2913 |
124646 |
124687 |
+ |
(AATCAA)n |
Simple_repeat |
scaffold2913 |
124727 |
124784 |
+ |
A-rich |
Low_complexity |
scaffold2913 |
124920 |
124949 |
+ |
(A)n |
Simple_repeat |
scaffold2913 |
125294 |
125321 |
+ |
(TCTAT)n |
Simple_repeat |
scaffold2913 |
125324 |
125414 |
+ |
RS656 |
Unspecified |
scaffold2913 |
125506 |
125536 |
+ |
(TATT)n |
Simple_repeat |
scaffold2913 |
125646 |
125663 |
+ |
(A)n |
Simple_repeat |
scaffold2913 |
125820 |
125852 |
+ |
(T)n |
Simple_repeat |
scaffold2913 |
125928 |
126181 |
+ |
(CAGTT)n |
Simple_repeat |
scaffold2913 |
125928 |
126700 |
+ |
(CAGTT)n |
Simple_repeat |
scaffold2913 |
126113 |
126700 |
- |
PL332 |
Unspecified |
scaffold2913 |
127019 |
127198 |
+ |
RS1307 |
Unspecified |
scaffold2913 |
127200 |
127399 |
+ |
RS384 |
Unspecified |
scaffold2913 |
127699 |
127810 |
- |
RS1847 |
Unspecified |
scaffold2913 |
127924 |
128201 |
+ |
(CTGAA)n |
Simple_repeat |
scaffold2913 |
129411 |
129441 |
+ |
(ACTGAT)n |
Simple_repeat |
scaffold2913 |
131834 |
131862 |
+ |
(CGAATCG)n |
Simple_repeat |
scaffold2913 |
131834 |
131970 |
+ |
(CGAATCG)n |
Simple_repeat |
scaffold2913 |
131848 |
131970 |
+ |
RS1049 |
Unspecified |
scaffold2913 |
133970 |
133993 |
+ |
(T)n |
Simple_repeat |
scaffold2913 |
138494 |
138513 |
+ |
(ACA)n |
Simple_repeat |
scaffold2913 |
138522 |
138624 |
- |
SINE2-1_PD |
SINE/tRNA-RTE |
scaffold2913 |
138555 |
138632 |
- |
RTE-1_STu |
LINE/RTE-BovB |
scaffold2913 |
139422 |
139454 |
+ |
(A)n |
Simple_repeat |
scaffold2913 |
139728 |
139757 |
+ |
(TTC)n |
Simple_repeat |
scaffold2913 |
139806 |
139850 |
+ |
(TT)n |
Simple_repeat |
scaffold2913 |
139870 |
139886 |
+ |
(A)n |
Simple_repeat |
scaffold2913 |
140210 |
140861 |
+ |
RS305 |
Unspecified |
scaffold2913 |
140883 |
141084 |
+ |
RS851 |
Unspecified |
scaffold2913 |
140926 |
141078 |
+ |
RS4056 |
Unspecified |
scaffold2913 |
146393 |
146412 |
+ |
(CAA)n |
Simple_repeat |
scaffold2913 |
147085 |
147138 |
+ |
(AAAT)n |
Simple_repeat |
scaffold2913 |
147699 |
147749 |
+ |
(A)n |
Simple_repeat |
scaffold2913 |
148029 |
148067 |
+ |
(TATT)n |
Simple_repeat |
scaffold2913 |
148610 |
148631 |
+ |
(T)n |
Simple_repeat |
scaffold2913 |
149120 |
149175 |
+ |
A-rich |
Low_complexity |
scaffold2913 |
149451 |
149595 |
+ |
RS115 |
Unspecified |
scaffold2913 |
150027 |
150057 |
+ |
(ATC)n |
Simple_repeat |
scaffold2913 |
151630 |
151663 |
+ |
(T)n |
Simple_repeat |
scaffold2913 |
151884 |
151912 |
+ |
(CAC)n |
Simple_repeat |
scaffold2913 |
152218 |
152272 |
+ |
GA-rich |
Low_complexity |
scaffold2913 |
152378 |
152462 |
+ |
(TTTTGTA)n |
Simple_repeat |
scaffold2913 |
152975 |
152998 |
+ |
(ATA)n |
Simple_repeat |
scaffold2913 |
153326 |
153346 |
+ |
(T)n |
Simple_repeat |
scaffold2913 |
154340 |
154383 |
+ |
(TAATA)n |
Simple_repeat |
scaffold2913 |
154556 |
154600 |
+ |
(TATTT)n |
Simple_repeat |
scaffold2913 |
155084 |
155458 |
- |
PL171 |
Unspecified |
scaffold2913 |
155584 |
155605 |
+ |
(ATTT)n |
Simple_repeat |
scaffold2913 |
155677 |
155733 |
+ |
(TATTT)n |
Simple_repeat |
scaffold2913 |
156383 |
156425 |
+ |
(TTAAGAT)n |
Simple_repeat |
scaffold2913 |
158314 |
158545 |
+ |
RS2785 |
Unspecified |
scaffold2913 |
158755 |
158775 |
+ |
(A)n |
Simple_repeat |
scaffold2913 |
158848 |
158888 |
+ |
(AATATTT)n |
Simple_repeat |
scaffold2913 |
158938 |
159032 |
+ |
RS2328 |
Unspecified |
scaffold2913 |
159151 |
159246 |
- |
RS4426 |
Unspecified |
scaffold2913 |
159248 |
159817 |
- |
RS4426 |
Unspecified |
scaffold2913 |
159821 |
159948 |
- |
RS7465 |
Unspecified |