scaffold29552 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold29552 |
1 |
158 |
+ |
PL167 |
Unspecified |
| scaffold29552 |
1541 |
1820 |
+ |
Copia-33_Pru-I |
LTR/Copia |
| scaffold29552 |
2092 |
2945 |
+ |
Copia-33_Pru-I |
LTR/Copia |
| scaffold29552 |
3310 |
4941 |
+ |
Copia-33_Pru-I |
LTR/Copia |
| scaffold29552 |
4236 |
5476 |
- |
PL888 |
Unspecified |
| scaffold29552 |
4939 |
5213 |
+ |
RS7799 |
Unspecified |
| scaffold29552 |
6195 |
6289 |
- |
RS13324 |
Unspecified |
| scaffold29552 |
6301 |
6541 |
+ |
RS4 |
Unspecified |
| scaffold29552 |
6447 |
6581 |
+ |
RS15433 |
Unspecified |
| scaffold29552 |
6935 |
6963 |
+ |
(TAA)n |
Simple_repeat |
| scaffold29552 |
7051 |
7078 |
+ |
(TAA)n |
Simple_repeat |
| scaffold29552 |
7086 |
7295 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold29552 |
7296 |
7359 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold29552 |
7368 |
7614 |
+ |
RS193 |
Unspecified |
| scaffold29552 |
7615 |
7648 |
+ |
(TAA)n |
Simple_repeat |
| scaffold29552 |
7859 |
7898 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold29552 |
8591 |
8681 |
+ |
(AATA)n |
Simple_repeat |
| scaffold29552 |
8746 |
8927 |
+ |
RS178 |
Unspecified |
| scaffold29552 |
9063 |
9145 |
+ |
GA-rich |
Low_complexity |
| scaffold29552 |
9767 |
9785 |
+ |
(ATT)n |
Simple_repeat |
| scaffold29552 |
10764 |
10794 |
+ |
(TTAATA)n |
Simple_repeat |
| scaffold29552 |
11326 |
11345 |
+ |
(A)n |
Simple_repeat |
| scaffold29552 |
11748 |
11819 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold29552 |
12939 |
13009 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold29552 |
13973 |
13993 |
+ |
(TAGG)n |
Simple_repeat |
| scaffold29552 |
14225 |
14268 |
+ |
A-rich |
Low_complexity |
| scaffold29552 |
14438 |
14510 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold29552 |
14511 |
14733 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold29552 |
15497 |
15551 |
+ |
(ATA)n |
Simple_repeat |
| scaffold29552 |
15552 |
15594 |
+ |
GA-rich |
Low_complexity |
| scaffold29552 |
16772 |
16974 |
+ |
RS6469 |
Unspecified |
| scaffold29552 |
17364 |
17577 |
+ |
RS3876 |
Unspecified |
| scaffold29552 |
17618 |
17691 |
+ |
(AAT)n |
Simple_repeat |
| scaffold29552 |
17732 |
17839 |
+ |
(ATT)n |
Simple_repeat |
| scaffold29552 |
19964 |
20058 |
+ |
(TGGATA)n |
Simple_repeat |
| scaffold29552 |
20098 |
20295 |
- |
RS12297 |
Unspecified |
| scaffold29552 |
21611 |
21639 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold29552 |
22985 |
24339 |
- |
RS1104 |
Unspecified |
| scaffold29552 |
25913 |
25962 |
+ |
A-rich |
Low_complexity |
| scaffold29552 |
26145 |
26259 |
+ |
Copia-27_ST-I |
LTR/Copia |
| scaffold29552 |
26415 |
26600 |
- |
RS17596 |
Unspecified |
| scaffold29552 |
26805 |
27141 |
+ |
Copia-27_ST-I |
LTR/Copia |
| scaffold29552 |
27221 |
28085 |
+ |
Copia-27_ST-I |
LTR/Copia |
| scaffold29552 |
28250 |
28269 |
+ |
(CCT)n |
Simple_repeat |
| scaffold29552 |
28496 |
30045 |
+ |
Copia-27_ST-I |
LTR/Copia |
| scaffold29552 |
30165 |
30203 |
+ |
(ATTCA)n |
Simple_repeat |
| scaffold29552 |
30852 |
30885 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold29552 |
31251 |
31492 |
+ |
RS193 |
Unspecified |
| scaffold29552 |
31532 |
32187 |
+ |
EnSpm-6_STu |
DNA/CMC-EnSpm |
| scaffold29552 |
32318 |
33189 |
+ |
EnSpm3_PT |
DNA/CMC-EnSpm |
| scaffold29552 |
33472 |
33555 |
- |
RS11786 |
Unspecified |
| scaffold29552 |
33605 |
33662 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold29552 |
34063 |
34147 |
- |
RS11786 |
Unspecified |
| scaffold29552 |
34507 |
34760 |
+ |
EnSpm-6_STu |
DNA/CMC-EnSpm |
| scaffold29552 |
34863 |
34952 |
+ |
(GAAGAT)n |
Simple_repeat |
| scaffold29552 |
34953 |
35035 |
+ |
(GAA)n |
Simple_repeat |
| scaffold29552 |
35036 |
35064 |
+ |
(GAAGAT)n |
Simple_repeat |
| scaffold29552 |
35177 |
35499 |
- |
RS1520 |
Unspecified |
| scaffold29552 |
35494 |
35904 |
- |
RS1765 |
Unspecified |
| scaffold29552 |
36147 |
36185 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold29552 |
36200 |
36318 |
+ |
(TATTAG)n |
Simple_repeat |
| scaffold29552 |
37671 |
37939 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold29552 |
38666 |
38682 |
+ |
(A)n |
Simple_repeat |
| scaffold29552 |
39573 |
39637 |
+ |
(ATA)n |
Simple_repeat |
| scaffold29552 |
40930 |
41239 |
- |
PL942 |
Unspecified |
| scaffold29552 |
41288 |
41428 |
+ |
RS1150 |
Unspecified |
| scaffold29552 |
41288 |
41448 |
+ |
RS1704 |
Unspecified |
| scaffold29552 |
41495 |
41513 |
+ |
(T)n |
Simple_repeat |
| scaffold29552 |
42814 |
42872 |
+ |
(TGAT)n |
Simple_repeat |
| scaffold29552 |
43834 |
43888 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold29552 |
44104 |
44164 |
+ |
(TTTATAT)n |
Simple_repeat |
| scaffold29552 |
44372 |
44567 |
+ |
PL288 |
Unspecified |
| scaffold29552 |
44929 |
44954 |
+ |
(T)n |
Simple_repeat |
| scaffold29552 |
45103 |
45162 |
+ |
G-rich |
Low_complexity |
| scaffold29552 |
45441 |
45481 |
+ |
(GTCGG)n |
Simple_repeat |
| scaffold29552 |
46588 |
46627 |
+ |
(ATGATTT)n |
Simple_repeat |
| scaffold29552 |
47043 |
47090 |
+ |
(TC)n |
Simple_repeat |
| scaffold29552 |
47307 |
47715 |
- |
PL580 |
Unspecified |
| scaffold29552 |
48571 |
48723 |
- |
RS49 |
Unspecified |
| scaffold29552 |
50816 |
51265 |
- |
PL912 |
Unspecified |
| scaffold29552 |
51276 |
51323 |
+ |
A-rich |
Low_complexity |
| scaffold29552 |
51567 |
51606 |
+ |
(ATCGTC)n |
Simple_repeat |
| scaffold29552 |
51619 |
51718 |
- |
RS10403 |
Unspecified |