scaffold29922 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold29922 |
1 |
753 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold29922 |
17 |
745 |
+ |
Copia7-ZM_I-int |
LTR/Copia |
| scaffold29922 |
850 |
1024 |
+ |
RS7041 |
Unspecified |
| scaffold29922 |
969 |
1030 |
- |
PL911 |
Unspecified |
| scaffold29922 |
2082 |
2193 |
+ |
(TATAAT)n |
Simple_repeat |
| scaffold29922 |
3050 |
3380 |
+ |
PL255 |
Unspecified |
| scaffold29922 |
3380 |
3543 |
- |
RS5215 |
Unspecified |
| scaffold29922 |
3786 |
3819 |
+ |
(T)n |
Simple_repeat |
| scaffold29922 |
4523 |
4590 |
+ |
(ATATA)n |
Simple_repeat |
| scaffold29922 |
4744 |
4776 |
+ |
GA-rich |
Low_complexity |
| scaffold29922 |
5118 |
5146 |
+ |
(TATC)n |
Simple_repeat |
| scaffold29922 |
5750 |
5895 |
+ |
(ATA)n |
Simple_repeat |
| scaffold29922 |
6211 |
6230 |
+ |
(TC)n |
Simple_repeat |
| scaffold29922 |
7485 |
7552 |
+ |
(AAC)n |
Simple_repeat |
| scaffold29922 |
8707 |
10404 |
+ |
Gypsy-36_BD-I |
LTR/Gypsy |
| scaffold29922 |
10734 |
11417 |
+ |
Gypsy-36_BD-I |
LTR/Gypsy |
| scaffold29922 |
11799 |
11866 |
+ |
ATGP5A_I-int |
LTR/Gypsy |
| scaffold29922 |
11867 |
11894 |
+ |
Copia-85_ST-I |
LTR/Copia |
| scaffold29922 |
12083 |
12186 |
+ |
RS2055 |
Unspecified |
| scaffold29922 |
12245 |
12382 |
+ |
RS314 |
Unspecified |
| scaffold29922 |
12267 |
12428 |
+ |
RS1094 |
Unspecified |
| scaffold29922 |
12301 |
12518 |
+ |
RS2202 |
Unspecified |
| scaffold29922 |
12525 |
12773 |
- |
RS332 |
Unspecified |
| scaffold29922 |
14085 |
14105 |
+ |
(CCT)n |
Simple_repeat |
| scaffold29922 |
15221 |
15702 |
- |
PL930 |
Unspecified |
| scaffold29922 |
16035 |
16411 |
- |
RS1216 |
Unspecified |
| scaffold29922 |
17290 |
17482 |
+ |
RS37 |
Unspecified |
| scaffold29922 |
18008 |
18039 |
+ |
(TGAA)n |
Simple_repeat |
| scaffold29922 |
18885 |
18981 |
+ |
(AAT)n |
Simple_repeat |
| scaffold29922 |
19974 |
20020 |
+ |
G-rich |
Low_complexity |
| scaffold29922 |
20188 |
20219 |
+ |
A-rich |
Low_complexity |
| scaffold29922 |
20249 |
20744 |
- |
PL249 |
Unspecified |
| scaffold29922 |
20579 |
20972 |
+ |
RS995 |
Unspecified |
| scaffold29922 |
20976 |
21196 |
+ |
RS12195 |
Unspecified |
| scaffold29922 |
21209 |
21561 |
+ |
RS2938 |
Unspecified |
| scaffold29922 |
21654 |
21694 |
- |
RS5691 |
Unspecified |
| scaffold29922 |
21705 |
21933 |
- |
RS11986 |
Unspecified |
| scaffold29922 |
22132 |
22399 |
- |
RS1150 |
Unspecified |
| scaffold29922 |
22230 |
22486 |
+ |
PL942 |
Unspecified |
| scaffold29922 |
22653 |
22679 |
+ |
(A)n |
Simple_repeat |
| scaffold29922 |
22827 |
22899 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold29922 |
22900 |
23071 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold29922 |
23123 |
23152 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold29922 |
24316 |
24415 |
- |
RS4475 |
Unspecified |
| scaffold29922 |
25733 |
25765 |
+ |
SHALINE2_MT |
LINE/L1 |
| scaffold29922 |
26608 |
27166 |
+ |
RS72 |
Unspecified |
| scaffold29922 |
27545 |
27604 |
+ |
(AATTT)n |
Simple_repeat |
| scaffold29922 |
28636 |
28761 |
+ |
RS1303 |
Unspecified |
| scaffold29922 |
28813 |
29054 |
- |
RS445 |
Unspecified |
| scaffold29922 |
29343 |
29399 |
+ |
(CT)n |
Simple_repeat |
| scaffold29922 |
30719 |
31132 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold29922 |
31452 |
31585 |
+ |
RS4622 |
Unspecified |
| scaffold29922 |
31853 |
31951 |
+ |
(AATACGA)n |
Simple_repeat |
| scaffold29922 |
32486 |
32554 |
+ |
A-rich |
Low_complexity |
| scaffold29922 |
32708 |
32746 |
+ |
(ACA)n |
Simple_repeat |
| scaffold29922 |
33329 |
33378 |
+ |
A-rich |
Low_complexity |
| scaffold29922 |
33758 |
33782 |
+ |
(A)n |
Simple_repeat |
| scaffold29922 |
33926 |
33984 |
+ |
(TTTTAA)n |
Simple_repeat |
| scaffold29922 |
34034 |
34087 |
+ |
GA-rich |
Low_complexity |
| scaffold29922 |
34844 |
34907 |
+ |
(AATTTGT)n |
Simple_repeat |
| scaffold29922 |
35260 |
36130 |
+ |
RS355 |
Unspecified |
| scaffold29922 |
35444 |
36275 |
- |
RS294 |
Unspecified |
| scaffold29922 |
36411 |
36452 |
+ |
(AATA)n |
Simple_repeat |
| scaffold29922 |
36605 |
36803 |
- |
RS3160 |
Unspecified |
| scaffold29922 |
36805 |
37105 |
- |
RS9490 |
Unspecified |
| scaffold29922 |
37541 |
37632 |
- |
RS4472 |
Unspecified |
| scaffold29922 |
37917 |
38027 |
- |
RS373 |
Unspecified |
| scaffold29922 |
40901 |
41135 |
- |
Copia-83_BRa-I |
LTR/Copia |
| scaffold29922 |
41880 |
41929 |
+ |
(ATGG)n |
Simple_repeat |
| scaffold29922 |
42124 |
42149 |
+ |
(A)n |
Simple_repeat |
| scaffold29922 |
42296 |
42337 |
+ |
(TTCATTT)n |
Simple_repeat |
| scaffold29922 |
42338 |
42345 |
+ |
(TTCTTAT)n |
Simple_repeat |
| scaffold29922 |
42570 |
42603 |
+ |
(T)n |
Simple_repeat |
| scaffold29922 |
43136 |
43466 |
+ |
RS7648 |
Unspecified |
| scaffold29922 |
43585 |
43615 |
+ |
G-rich |
Low_complexity |
| scaffold29922 |
43951 |
43978 |
+ |
GA-rich |
Low_complexity |
| scaffold29922 |
44510 |
44559 |
+ |
(TTTTCAG)n |
Simple_repeat |
| scaffold29922 |
44692 |
45315 |
- |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold29922 |
45360 |
45418 |
+ |
(CAT)n |
Simple_repeat |
| scaffold29922 |
45529 |
46236 |
- |
RS7775 |
Unspecified |
| scaffold29922 |
45959 |
46338 |
- |
RS845 |
Unspecified |
| scaffold29922 |
46667 |
46720 |
+ |
A-rich |
Low_complexity |
| scaffold29922 |
47129 |
47186 |
+ |
(GATTTAT)n |
Simple_repeat |
| scaffold29922 |
47825 |
47878 |
+ |
(AATTT)n |
Simple_repeat |
| scaffold29922 |
48067 |
48115 |
+ |
A-rich |
Low_complexity |
| scaffold29922 |
48359 |
48466 |
+ |
A-rich |
Low_complexity |
| scaffold29922 |
51987 |
52063 |
+ |
(TTCT)n |
Simple_repeat |
| scaffold29922 |
52191 |
52253 |
+ |
(ATACGG)n |
Simple_repeat |
| scaffold29922 |
52925 |
53167 |
- |
RS248 |
Unspecified |
| scaffold29922 |
53441 |
53490 |
- |
HAT-14_Mad |
DNA/hAT-Tip100 |
| scaffold29922 |
53489 |
53655 |
- |
RS275 |
Unspecified |
| scaffold29922 |
54019 |
54558 |
- |
RS2575 |
Unspecified |
| scaffold29922 |
56381 |
56557 |
+ |
RS371 |
Unspecified |
| scaffold29922 |
58366 |
58599 |
+ |
PL619 |
Unspecified |
| scaffold29922 |
58791 |
58952 |
+ |
RS2719 |
Unspecified |
| scaffold29922 |
59359 |
59387 |
+ |
(A)n |
Simple_repeat |
| scaffold29922 |
60411 |
61149 |
+ |
MUDRAVI2 |
DNA/MULE-MuDR |
| scaffold29922 |
62857 |
62907 |
+ |
RS658 |
Unspecified |
| scaffold29922 |
62893 |
63691 |
+ |
RS10551 |
Unspecified |
| scaffold29922 |
63705 |
63859 |
- |
RS6759 |
Unspecified |
| scaffold29922 |
64060 |
64193 |
- |
RS8330 |
Unspecified |
| scaffold29922 |
64291 |
64432 |
- |
RS10536 |
Unspecified |
| scaffold29922 |
64458 |
64588 |
- |
RS3484 |
Unspecified |
| scaffold29922 |
64848 |
64914 |
- |
RS1375 |
Unspecified |
| scaffold29922 |
66266 |
66292 |
+ |
A-rich |
Low_complexity |
| scaffold29922 |
66474 |
66523 |
- |
RS3484 |
Unspecified |
| scaffold29922 |
67070 |
67247 |
- |
RS1375 |
Unspecified |
| scaffold29922 |
67245 |
68732 |
+ |
RS658 |
Unspecified |
| scaffold29922 |
69334 |
69559 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold29922 |
69368 |
69583 |
+ |
ATCOPIN_LTR |
LTR |
| scaffold29922 |
69737 |
69961 |
- |
RS2696 |
Unspecified |
| scaffold29922 |
70192 |
70320 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold29922 |
70321 |
70744 |
+ |
RS262 |
Unspecified |
| scaffold29922 |
70955 |
71053 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold29922 |
71069 |
71289 |
- |
RS11596 |
Unspecified |
| scaffold29922 |
71530 |
71713 |
+ |
PL481 |
Unspecified |
| scaffold29922 |
71713 |
71853 |
- |
RS482 |
Unspecified |
| scaffold29922 |
71860 |
72107 |
- |
PL226 |
Unspecified |
| scaffold29922 |
72498 |
72718 |
- |
RS11596 |
Unspecified |
| scaffold29922 |
73384 |
73423 |
+ |
(ATCAA)n |
Simple_repeat |
| scaffold29922 |
73569 |
73620 |
+ |
(AATAAT)n |
Simple_repeat |
| scaffold29922 |
75497 |
75528 |
+ |
(ATT)n |
Simple_repeat |
| scaffold29922 |
77967 |
77987 |
+ |
(T)n |
Simple_repeat |
| scaffold29922 |
78903 |
78989 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold29922 |
80874 |
80927 |
+ |
TPN1_IN |
DNA/CMC-EnSpm |
| scaffold29922 |
80986 |
82269 |
+ |
L1-5_STu |
LINE/L1 |
| scaffold29922 |
83893 |
83931 |
+ |
DIASPORA_I-int |
LTR/Gypsy |
| scaffold29922 |
83900 |
83986 |
+ |
Gypsy-3_PD-I |
LTR/Gypsy |
| scaffold29922 |
83902 |
84285 |
- |
Gypsy-119_GM-I |
LTR/Gypsy |
| scaffold29922 |
83902 |
84039 |
- |
Gypsy-119_GM-I |
LTR/Gypsy |
| scaffold29922 |
84004 |
84285 |
+ |
RS1833 |
Unspecified |
| scaffold29922 |
84037 |
84431 |
+ |
RS4674 |
Unspecified |
| scaffold29922 |
84591 |
84636 |
+ |
(ACAACG)n |
Simple_repeat |
| scaffold29922 |
84965 |
84985 |
+ |
(T)n |
Simple_repeat |
| scaffold29922 |
85218 |
85348 |
+ |
TPN1_IN |
DNA/CMC-EnSpm |
| scaffold29922 |
86014 |
86032 |
+ |
(ACG)n |
Simple_repeat |
| scaffold29922 |
86193 |
86224 |
+ |
(TTA)n |
Simple_repeat |
| scaffold29922 |
86616 |
86636 |
+ |
(T)n |
Simple_repeat |
| scaffold29922 |
86691 |
86718 |
+ |
(A)n |
Simple_repeat |
| scaffold29922 |
86791 |
87039 |
+ |
RS4 |
Unspecified |