scaffold30166 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold30166 |
84 |
310 |
+ |
RS68 |
Unspecified |
| scaffold30166 |
84 |
266 |
- |
RS757 |
Unspecified |
| scaffold30166 |
472 |
787 |
+ |
Gypsy-78_PTr-I |
LTR/Gypsy |
| scaffold30166 |
538 |
558 |
+ |
A-rich |
Low_complexity |
| scaffold30166 |
559 |
580 |
+ |
(A)n |
Simple_repeat |
| scaffold30166 |
590 |
637 |
+ |
(TCTTCA)n |
Simple_repeat |
| scaffold30166 |
878 |
1210 |
+ |
PL727 |
Unspecified |
| scaffold30166 |
1211 |
1355 |
- |
RS1903 |
Unspecified |
| scaffold30166 |
1757 |
1973 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold30166 |
1974 |
2044 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold30166 |
2509 |
2541 |
+ |
(ACA)n |
Simple_repeat |
| scaffold30166 |
2891 |
3223 |
- |
Copia-2_SL-LTR |
LTR/Copia |
| scaffold30166 |
3727 |
3794 |
+ |
(TTTTTA)n |
Simple_repeat |
| scaffold30166 |
4558 |
4611 |
+ |
(ATT)n |
Simple_repeat |
| scaffold30166 |
4612 |
4620 |
+ |
(ATTATTT)n |
Simple_repeat |
| scaffold30166 |
4975 |
5033 |
+ |
(TAT)n |
Simple_repeat |
| scaffold30166 |
5625 |
5677 |
+ |
A-rich |
Low_complexity |
| scaffold30166 |
5982 |
6172 |
+ |
RS38 |
Unspecified |
| scaffold30166 |
7021 |
7066 |
+ |
(T)n |
Simple_repeat |
| scaffold30166 |
7519 |
7563 |
+ |
(TTA)n |
Simple_repeat |
| scaffold30166 |
7784 |
8045 |
+ |
RS109 |
Unspecified |
| scaffold30166 |
8367 |
8391 |
+ |
(AATAAA)n |
Simple_repeat |
| scaffold30166 |
8417 |
8568 |
- |
PL271 |
Unspecified |
| scaffold30166 |
10488 |
10751 |
+ |
RS356 |
Unspecified |
| scaffold30166 |
10753 |
10811 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold30166 |
11017 |
11105 |
+ |
(TAATAT)n |
Simple_repeat |
| scaffold30166 |
11298 |
11476 |
+ |
RS5 |
Unspecified |
| scaffold30166 |
11573 |
11602 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold30166 |
11713 |
11746 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold30166 |
13402 |
13459 |
+ |
(CCAAGG)n |
Simple_repeat |
| scaffold30166 |
15628 |
15711 |
- |
RS115 |
Unspecified |
| scaffold30166 |
15652 |
15720 |
- |
RS20 |
Unspecified |
| scaffold30166 |
17114 |
17150 |
+ |
(TA)n |
Simple_repeat |
| scaffold30166 |
19675 |
19702 |
+ |
A-rich |
Low_complexity |
| scaffold30166 |
19987 |
20039 |
+ |
A-rich |
Low_complexity |
| scaffold30166 |
21034 |
21104 |
+ |
(TAATATA)n |
Simple_repeat |
| scaffold30166 |
22996 |
23266 |
- |
RS1 |
Unspecified |
| scaffold30166 |
23172 |
23278 |
+ |
RS16358 |
Unspecified |
| scaffold30166 |
23402 |
23640 |
- |
RS16888 |
Unspecified |
| scaffold30166 |
24367 |
24498 |
- |
RS15131 |
Unspecified |
| scaffold30166 |
25445 |
25594 |
- |
RS12141 |
Unspecified |
| scaffold30166 |
25698 |
25761 |
+ |
(ATTAA)n |
Simple_repeat |
| scaffold30166 |
26265 |
26318 |
+ |
A-rich |
Low_complexity |
| scaffold30166 |
26951 |
26987 |
+ |
(ATT)n |
Simple_repeat |
| scaffold30166 |
27780 |
27881 |
+ |
RS4475 |
Unspecified |
| scaffold30166 |
27972 |
28007 |
+ |
(AAACA)n |
Simple_repeat |
| scaffold30166 |
28066 |
28082 |
+ |
(TAC)n |
Simple_repeat |
| scaffold30166 |
28350 |
28450 |
- |
RS16836 |
Unspecified |
| scaffold30166 |
29395 |
29428 |
+ |
(T)n |
Simple_repeat |
| scaffold30166 |
29657 |
30086 |
+ |
PL6 |
Unspecified |
| scaffold30166 |
30133 |
30206 |
+ |
tRNASAT-1_ZM |
Satellite |
| scaffold30166 |
30280 |
30549 |
+ |
RS527 |
Unspecified |
| scaffold30166 |
30691 |
30957 |
+ |
RS1780 |
Unspecified |
| scaffold30166 |
31259 |
31343 |
+ |
(TA)n |
Simple_repeat |
| scaffold30166 |
32794 |
32924 |
- |
RS9373 |
Unspecified |
| scaffold30166 |
32969 |
33079 |
- |
RS5797 |
Unspecified |
| scaffold30166 |
34985 |
35031 |
+ |
A-rich |
Low_complexity |
| scaffold30166 |
35033 |
35205 |
+ |
(ATA)n |
Simple_repeat |
| scaffold30166 |
35216 |
35321 |
+ |
(TTCAGAAAAC)n |
Simple_repeat |
| scaffold30166 |
35661 |
35700 |
+ |
(TACAAGAT)n |
Simple_repeat |
| scaffold30166 |
35811 |
35837 |
+ |
(T)n |
Simple_repeat |
| scaffold30166 |
35882 |
35916 |
+ |
A-rich |
Low_complexity |
| scaffold30166 |
36680 |
36734 |
+ |
(AT)n |
Simple_repeat |
| scaffold30166 |
36906 |
36933 |
+ |
(CCGAT)n |
Simple_repeat |
| scaffold30166 |
37314 |
37357 |
+ |
(ATATTAT)n |
Simple_repeat |
| scaffold30166 |
37447 |
37522 |
- |
RS5734 |
Unspecified |
| scaffold30166 |
38194 |
38255 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold30166 |
38260 |
38451 |
+ |
RS354 |
Unspecified |
| scaffold30166 |
38606 |
38804 |
+ |
RS3316 |
Unspecified |
| scaffold30166 |
38714 |
38973 |
- |
RS2051 |
Unspecified |
| scaffold30166 |
38969 |
41185 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold30166 |
38971 |
39278 |
- |
Copia-82_GM-I |
LTR/Copia |
| scaffold30166 |
39668 |
40766 |
- |
ATCopia26I |
LTR/Copia |
| scaffold30166 |
40802 |
40902 |
- |
ATCopia22I |
LTR/Copia |
| scaffold30166 |
40873 |
40935 |
- |
Copia-81_BRa-I |
LTR/Copia |
| scaffold30166 |
40958 |
41887 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold30166 |
41410 |
41836 |
- |
Copia-81_BRa-I |
LTR/Copia |
| scaffold30166 |
41943 |
42225 |
+ |
RS354 |
Unspecified |
| scaffold30166 |
42511 |
42543 |
+ |
(AATTAA)n |
Simple_repeat |
| scaffold30166 |
42624 |
42664 |
+ |
(AACAA)n |
Simple_repeat |
| scaffold30166 |
42914 |
42993 |
- |
RS727 |
Unspecified |
| scaffold30166 |
42988 |
43180 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold30166 |
43354 |
43404 |
+ |
A-rich |
Low_complexity |
| scaffold30166 |
44469 |
44536 |
+ |
(AAT)n |
Simple_repeat |
| scaffold30166 |
46525 |
46582 |
+ |
(TTTTTA)n |
Simple_repeat |
| scaffold30166 |
47019 |
47321 |
- |
RS574 |
Unspecified |
| scaffold30166 |
47397 |
47423 |
+ |
(AAT)n |
Simple_repeat |
| scaffold30166 |
48460 |
48478 |
+ |
(AT)n |
Simple_repeat |
| scaffold30166 |
48483 |
48754 |
- |
LTR2-ZM_LTR |
LTR |