scaffold3101 Repeat List
genome |
start |
end |
strand |
repeat-name |
repeat-class |
scaffold3101 |
1 |
46 |
+ |
(T)n |
Simple_repeat |
scaffold3101 |
284 |
363 |
+ |
(ATTT)n |
Simple_repeat |
scaffold3101 |
1258 |
2010 |
+ |
RS1223 |
Unspecified |
scaffold3101 |
1989 |
2112 |
+ |
RS1223 |
Unspecified |
scaffold3101 |
2956 |
3436 |
+ |
MTIS112A |
DNA/PIF-Harbinger |
scaffold3101 |
4645 |
4771 |
- |
RS15131 |
Unspecified |
scaffold3101 |
4783 |
4817 |
- |
RS15131 |
Unspecified |
scaffold3101 |
4814 |
5076 |
+ |
RS736 |
Unspecified |
scaffold3101 |
5075 |
5156 |
- |
RS15131 |
Unspecified |
scaffold3101 |
5218 |
5349 |
- |
PL832 |
Unspecified |
scaffold3101 |
7398 |
7932 |
+ |
RS3897 |
Unspecified |
scaffold3101 |
8759 |
9069 |
+ |
RS7906 |
Unspecified |
scaffold3101 |
9869 |
10456 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
scaffold3101 |
10005 |
10034 |
+ |
(ATGG)n |
Simple_repeat |
scaffold3101 |
10452 |
10808 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
scaffold3101 |
11578 |
11645 |
+ |
GA-rich |
Low_complexity |
scaffold3101 |
12434 |
12541 |
+ |
Copia-3_PTri-I |
LTR/Copia |
scaffold3101 |
13643 |
14314 |
+ |
RS2892 |
Unspecified |
scaffold3101 |
14372 |
14451 |
- |
RS9334 |
Unspecified |
scaffold3101 |
14379 |
14469 |
+ |
RS18019 |
Unspecified |
scaffold3101 |
14663 |
14764 |
+ |
RS6112 |
Unspecified |
scaffold3101 |
14802 |
15415 |
+ |
PL193 |
Unspecified |
scaffold3101 |
15411 |
15652 |
+ |
RS995 |
Unspecified |
scaffold3101 |
15504 |
15679 |
- |
RS10554 |
Unspecified |
scaffold3101 |
15683 |
15716 |
+ |
(AAAATA)n |
Simple_repeat |
scaffold3101 |
15862 |
15895 |
+ |
(T)n |
Simple_repeat |
scaffold3101 |
16002 |
16807 |
+ |
RS691 |
Unspecified |
scaffold3101 |
16392 |
16894 |
- |
RS8180 |
Unspecified |
scaffold3101 |
17389 |
17410 |
+ |
(T)n |
Simple_repeat |
scaffold3101 |
17474 |
17528 |
+ |
(ATAGTTA)n |
Simple_repeat |
scaffold3101 |
17510 |
17574 |
+ |
(AATTAA)n |
Simple_repeat |
scaffold3101 |
18457 |
18498 |
+ |
(T)n |
Simple_repeat |
scaffold3101 |
18781 |
18805 |
+ |
(T)n |
Simple_repeat |
scaffold3101 |
19079 |
19131 |
+ |
A-rich |
Low_complexity |
scaffold3101 |
19671 |
19698 |
+ |
(TAGAT)n |
Simple_repeat |
scaffold3101 |
19857 |
20077 |
- |
RS1137 |
Unspecified |
scaffold3101 |
22490 |
22554 |
- |
RS1591 |
Unspecified |
scaffold3101 |
22572 |
22896 |
- |
RS4405 |
Unspecified |
scaffold3101 |
22897 |
23097 |
- |
RS2284 |
Unspecified |
scaffold3101 |
22972 |
23122 |
- |
RS4043 |
Unspecified |
scaffold3101 |
23124 |
23323 |
- |
RS9275 |
Unspecified |
scaffold3101 |
24875 |
24964 |
+ |
RS2191 |
Unspecified |
scaffold3101 |
24900 |
25021 |
+ |
RS3392 |
Unspecified |
scaffold3101 |
25002 |
25390 |
+ |
RS12361 |
Unspecified |
scaffold3101 |
25562 |
25613 |
+ |
G-rich |
Low_complexity |
scaffold3101 |
25677 |
26932 |
- |
Copia-52_ST-I |
LTR/Copia |
scaffold3101 |
26933 |
27108 |
+ |
RS1362 |
Unspecified |
scaffold3101 |
27109 |
27343 |
+ |
RS5856 |
Unspecified |
scaffold3101 |
28245 |
28318 |
+ |
(TAA)n |
Simple_repeat |
scaffold3101 |
28349 |
28515 |
+ |
(AGTTC)n |
Simple_repeat |
scaffold3101 |
29522 |
29540 |
+ |
(T)n |
Simple_repeat |
scaffold3101 |
30120 |
30159 |
+ |
RS18118 |
Unspecified |
scaffold3101 |
31001 |
31171 |
+ |
RS5 |
Unspecified |
scaffold3101 |
34421 |
34542 |
+ |
RS3392 |
Unspecified |
scaffold3101 |
34523 |
34911 |
+ |
RS12361 |
Unspecified |
scaffold3101 |
35083 |
35110 |
+ |
G-rich |
Low_complexity |
scaffold3101 |
35884 |
36127 |
+ |
RS14429 |
Unspecified |
scaffold3101 |
36484 |
36669 |
+ |
(TCGGG)n |
Simple_repeat |
scaffold3101 |
37216 |
37343 |
+ |
RS886 |
Unspecified |
scaffold3101 |
37384 |
37456 |
+ |
A-rich |
Low_complexity |
scaffold3101 |
38476 |
38586 |
- |
RS5112 |
Unspecified |
scaffold3101 |
38562 |
38891 |
+ |
RS13440 |
Unspecified |
scaffold3101 |
38914 |
38966 |
+ |
(ATTCAAT)n |
Simple_repeat |
scaffold3101 |
38958 |
38998 |
+ |
(TATGTAG)n |
Simple_repeat |
scaffold3101 |
39341 |
39413 |
+ |
RS1766 |
Unspecified |
scaffold3101 |
39846 |
39908 |
- |
RS3094 |
Unspecified |
scaffold3101 |
40042 |
40112 |
+ |
RS1766 |
Unspecified |
scaffold3101 |
41167 |
41204 |
+ |
RS581 |
Unspecified |
scaffold3101 |
41176 |
41395 |
+ |
RS11189 |
Unspecified |
scaffold3101 |
41886 |
41954 |
+ |
(TTCT)n |
Simple_repeat |
scaffold3101 |
43920 |
44322 |
- |
RS5812 |
Unspecified |
scaffold3101 |
44797 |
44824 |
+ |
(A)n |
Simple_repeat |
scaffold3101 |
45318 |
45536 |
- |
RS8780 |
Unspecified |
scaffold3101 |
45414 |
45758 |
- |
RS7283 |
Unspecified |
scaffold3101 |
45505 |
45799 |
- |
RS6929 |
Unspecified |
scaffold3101 |
45659 |
46016 |
+ |
RS4500 |
Unspecified |
scaffold3101 |
46104 |
46242 |
- |
RS5922 |
Unspecified |
scaffold3101 |
46286 |
46356 |
- |
tRNASAT-1_ZM |
Satellite |
scaffold3101 |
46416 |
46625 |
- |
RS9315 |
Unspecified |
scaffold3101 |
46678 |
46879 |
+ |
(TTCAG)n |
Simple_repeat |
scaffold3101 |
47859 |
48304 |
+ |
RS9251 |
Unspecified |
scaffold3101 |
48603 |
48661 |
+ |
RS146 |
Unspecified |
scaffold3101 |
48753 |
48895 |
+ |
RS146 |
Unspecified |
scaffold3101 |
49122 |
49173 |
- |
Copia-3_PTri-I |
LTR/Copia |
scaffold3101 |
49174 |
49245 |
- |
Copia-3_PTri-I |
LTR/Copia |
scaffold3101 |
49284 |
49380 |
- |
RS3817 |
Unspecified |
scaffold3101 |
49504 |
49535 |
+ |
(TTCTTT)n |
Simple_repeat |
scaffold3101 |
51353 |
51400 |
+ |
(TG)n |
Simple_repeat |
scaffold3101 |
51413 |
51737 |
+ |
RS4102 |
Unspecified |
scaffold3101 |
54843 |
54873 |
+ |
(ATT)n |
Simple_repeat |
scaffold3101 |
55116 |
55152 |
+ |
(ATTCAGC)n |
Simple_repeat |
scaffold3101 |
56445 |
56781 |
- |
RS10928 |
Unspecified |
scaffold3101 |
56934 |
56965 |
+ |
(T)n |
Simple_repeat |
scaffold3101 |
57730 |
58066 |
- |
RS10928 |
Unspecified |
scaffold3101 |
58072 |
58094 |
+ |
(AAAT)n |
Simple_repeat |
scaffold3101 |
58919 |
59146 |
- |
RS14400 |
Unspecified |
scaffold3101 |
61003 |
61093 |
- |
LTR-7_Mad-LTR |
LTR |
scaffold3101 |
62189 |
62294 |
- |
RS14440 |
Unspecified |
scaffold3101 |
62891 |
63112 |
- |
RS13662 |
Unspecified |
scaffold3101 |
63162 |
63376 |
- |
RS14074 |
Unspecified |
scaffold3101 |
64310 |
64433 |
+ |
(AGCTG)n |
Simple_repeat |
scaffold3101 |
64808 |
64852 |
+ |
(A)n |
Simple_repeat |
scaffold3101 |
66131 |
66162 |
+ |
(T)n |
Simple_repeat |
scaffold3101 |
67665 |
67695 |
+ |
(A)n |
Simple_repeat |
scaffold3101 |
67881 |
67908 |
+ |
(AATAA)n |
Simple_repeat |
scaffold3101 |
67909 |
67933 |
+ |
(AAC)n |
Simple_repeat |
scaffold3101 |
67934 |
67955 |
+ |
(AATAA)n |
Simple_repeat |
scaffold3101 |
68418 |
68702 |
+ |
RS588 |
Unspecified |
scaffold3101 |
69609 |
69637 |
+ |
(GTT)n |
Simple_repeat |
scaffold3101 |
69884 |
70523 |
- |
RS11316 |
Unspecified |
scaffold3101 |
70675 |
70720 |
+ |
(GTA)n |
Simple_repeat |
scaffold3101 |
70718 |
71349 |
+ |
RS2190 |
Unspecified |
scaffold3101 |
71514 |
71536 |
+ |
(AATT)n |
Simple_repeat |
scaffold3101 |
71551 |
71951 |
+ |
RS2275 |
Unspecified |
scaffold3101 |
72712 |
72833 |
+ |
RS3681 |
Unspecified |
scaffold3101 |
73102 |
73503 |
+ |
RS3270 |
Unspecified |
scaffold3101 |
74380 |
74434 |
+ |
RS3270 |
Unspecified |
scaffold3101 |
74567 |
74953 |
+ |
PL290 |
Unspecified |
scaffold3101 |
74951 |
75066 |
+ |
(ATA)n |
Simple_repeat |
scaffold3101 |
75093 |
76044 |
+ |
PL129 |
Unspecified |
scaffold3101 |
76381 |
76432 |
+ |
(GTTTTTC)n |
Simple_repeat |
scaffold3101 |
77183 |
77270 |
+ |
(GCTTGGT)n |
Simple_repeat |
scaffold3101 |
77436 |
77476 |
+ |
(TTTTGT)n |
Simple_repeat |
scaffold3101 |
78326 |
78363 |
+ |
(TTTGGTG)n |
Simple_repeat |
scaffold3101 |
78725 |
79093 |
+ |
RS2047 |
Unspecified |
scaffold3101 |
78821 |
79203 |
+ |
RS911 |
Unspecified |
scaffold3101 |
79896 |
80027 |
- |
Ogre-VP1_I-int |
LTR/Gypsy |