scaffold31334 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold31334 |
1 |
171 |
+ |
RS287 |
Unspecified |
| scaffold31334 |
381 |
405 |
+ |
(ACC)n |
Simple_repeat |
| scaffold31334 |
538 |
836 |
+ |
RS5757 |
Unspecified |
| scaffold31334 |
936 |
974 |
+ |
(TTGTT)n |
Simple_repeat |
| scaffold31334 |
1021 |
1054 |
+ |
(TA)n |
Simple_repeat |
| scaffold31334 |
1116 |
1143 |
+ |
(TGA)n |
Simple_repeat |
| scaffold31334 |
2741 |
2852 |
- |
RS582 |
Unspecified |
| scaffold31334 |
2849 |
2906 |
+ |
(T)n |
Simple_repeat |
| scaffold31334 |
2922 |
2970 |
- |
RS582 |
Unspecified |
| scaffold31334 |
4394 |
5009 |
- |
RS612 |
Unspecified |
| scaffold31334 |
5268 |
5299 |
+ |
(TCGTT)n |
Simple_repeat |
| scaffold31334 |
5423 |
5460 |
- |
RS16679 |
Unspecified |
| scaffold31334 |
5585 |
5671 |
- |
RS160 |
Unspecified |
| scaffold31334 |
5672 |
5914 |
+ |
RS4 |
Unspecified |
| scaffold31334 |
5918 |
6198 |
- |
RS160 |
Unspecified |
| scaffold31334 |
6536 |
6570 |
+ |
(TAATTT)n |
Simple_repeat |
| scaffold31334 |
8134 |
8160 |
+ |
(AAAAG)n |
Simple_repeat |
| scaffold31334 |
8877 |
8919 |
+ |
(ACC)n |
Simple_repeat |
| scaffold31334 |
9195 |
9242 |
+ |
(ATT)n |
Simple_repeat |
| scaffold31334 |
9398 |
9418 |
+ |
(A)n |
Simple_repeat |
| scaffold31334 |
10027 |
10263 |
- |
RS114 |
Unspecified |
| scaffold31334 |
10263 |
10304 |
+ |
(ATTGA)n |
Simple_repeat |
| scaffold31334 |
10608 |
10727 |
+ |
RS5046 |
Unspecified |
| scaffold31334 |
11280 |
11299 |
+ |
(T)n |
Simple_repeat |
| scaffold31334 |
11379 |
11619 |
+ |
RS4354 |
Unspecified |
| scaffold31334 |
11920 |
12295 |
- |
RS3984 |
Unspecified |
| scaffold31334 |
12295 |
12471 |
- |
RS1362 |
Unspecified |
| scaffold31334 |
12498 |
12646 |
+ |
RS5432 |
Unspecified |
| scaffold31334 |
12905 |
13083 |
+ |
SHAMET |
DNA/TcMar-Stowaway |
| scaffold31334 |
13419 |
13440 |
+ |
(A)n |
Simple_repeat |
| scaffold31334 |
14785 |
14809 |
+ |
(ATGAA)n |
Simple_repeat |
| scaffold31334 |
17071 |
17094 |
+ |
(T)n |
Simple_repeat |
| scaffold31334 |
17971 |
18011 |
+ |
(TGACCT)n |
Simple_repeat |
| scaffold31334 |
20435 |
20457 |
+ |
(TGC)n |
Simple_repeat |
| scaffold31334 |
20924 |
20981 |
+ |
RS38 |
Unspecified |
| scaffold31334 |
21795 |
21874 |
+ |
(TTA)n |
Simple_repeat |
| scaffold31334 |
22125 |
22247 |
+ |
A-rich |
Low_complexity |
| scaffold31334 |
23087 |
23247 |
+ |
RS2844 |
Unspecified |
| scaffold31334 |
24186 |
24266 |
- |
EnSpm-11_STu |
DNA/CMC-EnSpm |
| scaffold31334 |
25230 |
25330 |
+ |
L1-18_STu |
LINE/L1 |
| scaffold31334 |
25469 |
26315 |
+ |
LINE1I_MT |
LINE/L1 |
| scaffold31334 |
26455 |
26711 |
+ |
L1-5_STu |
LINE/L1 |
| scaffold31334 |
27658 |
27696 |
+ |
(TACTCCG)n |
Simple_repeat |
| scaffold31334 |
28260 |
28544 |
+ |
RS367 |
Unspecified |
| scaffold31334 |
28401 |
28565 |
+ |
PL650 |
Unspecified |
| scaffold31334 |
28564 |
28657 |
+ |
RS16382 |
Unspecified |
| scaffold31334 |
28564 |
28715 |
+ |
PL754 |
Unspecified |
| scaffold31334 |
28656 |
28972 |
+ |
PL650 |
Unspecified |
| scaffold31334 |
28692 |
29190 |
+ |
RS367 |
Unspecified |
| scaffold31334 |
30267 |
30409 |
+ |
RS4425 |
Unspecified |
| scaffold31334 |
30725 |
30964 |
- |
RS240 |
Unspecified |
| scaffold31334 |
31581 |
31622 |
- |
RS1874 |
Unspecified |
| scaffold31334 |
32093 |
32115 |
+ |
(A)n |
Simple_repeat |
| scaffold31334 |
32704 |
32867 |
+ |
SHAMET |
DNA/TcMar-Stowaway |
| scaffold31334 |
32920 |
32969 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold31334 |
34388 |
34425 |
+ |
(TAA)n |
Simple_repeat |
| scaffold31334 |
34456 |
34543 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold31334 |
34592 |
34744 |
+ |
RS15351 |
Unspecified |
| scaffold31334 |
35107 |
35215 |
+ |
RS14907 |
Unspecified |
| scaffold31334 |
36885 |
36963 |
+ |
(GACCC)n |
Simple_repeat |
| scaffold31334 |
40183 |
40198 |
+ |
A-rich |
Low_complexity |
| scaffold31334 |
40199 |
40236 |
+ |
(ATCAA)n |
Simple_repeat |
| scaffold31334 |
40237 |
40260 |
+ |
A-rich |
Low_complexity |
| scaffold31334 |
40908 |
41912 |
- |
gypsy |
gypsy(TransposonPSI) |
| scaffold31334 |
42241 |
42308 |
+ |
(TTG)n |
Simple_repeat |
| scaffold31334 |
43955 |
44088 |
+ |
RS10907 |
Unspecified |
| scaffold31334 |
44589 |
44615 |
+ |
(GAATC)n |
Simple_repeat |
| scaffold31334 |
44633 |
44782 |
- |
RS145 |
Unspecified |
| scaffold31334 |
44951 |
45117 |
+ |
(AT)n |
Simple_repeat |
| scaffold31334 |
45076 |
45117 |
+ |
(AT)n |
Simple_repeat |
| scaffold31334 |
45355 |
45527 |
- |
RS204 |
Unspecified |
| scaffold31334 |
45609 |
45802 |
+ |
RS10121 |
Unspecified |
| scaffold31334 |
45824 |
45919 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold31334 |
46112 |
46149 |
+ |
(AAAAAT)n |
Simple_repeat |
| scaffold31334 |
46458 |
46504 |
+ |
(TTTTCA)n |
Simple_repeat |
| scaffold31334 |
46486 |
46525 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold31334 |
46549 |
46684 |
- |
RS145 |
Unspecified |
| scaffold31334 |
46686 |
46861 |
+ |
RS11421 |
Unspecified |
| scaffold31334 |
46706 |
46996 |
- |
RS443 |
Unspecified |
| scaffold31334 |
48392 |
48418 |
+ |
(GAATC)n |
Simple_repeat |
| scaffold31334 |
48499 |
48546 |
+ |
(TGTAATT)n |
Simple_repeat |
| scaffold31334 |
48989 |
49028 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold31334 |
49587 |
49861 |
- |
RS10240 |
Unspecified |
| scaffold31334 |
50196 |
50415 |
+ |
RS13136 |
Unspecified |
| scaffold31334 |
50446 |
50478 |
+ |
GA-rich |
Low_complexity |
| scaffold31334 |
50700 |
50878 |
+ |
RS15710 |
Unspecified |
| scaffold31334 |
51537 |
51640 |
- |
RS22 |
Unspecified |
| scaffold31334 |
51709 |
51754 |
+ |
(TTG)n |
Simple_repeat |
| scaffold31334 |
52897 |
53020 |
+ |
RS14341 |
Unspecified |
| scaffold31334 |
54092 |
55197 |
+ |
Copia-71_VV-I |
LTR/Copia |
| scaffold31334 |
55337 |
55399 |
+ |
(ACCTC)n |
Simple_repeat |
| scaffold31334 |
55456 |
57071 |
+ |
Copia-71_VV-I |
LTR/Copia |
| scaffold31334 |
57063 |
57264 |
+ |
RS11030 |
Unspecified |
| scaffold31334 |
57312 |
57439 |
+ |
RS1918 |
Unspecified |
| scaffold31334 |
57600 |
57624 |
+ |
(T)n |
Simple_repeat |
| scaffold31334 |
58082 |
58262 |
+ |
Gypsy-19_SB-I |
LTR/Gypsy |
| scaffold31334 |
58222 |
58262 |
+ |
Gypsy-19_SB-I |
LTR/Gypsy |
| scaffold31334 |
58390 |
58617 |
+ |
RS10060 |
Unspecified |
| scaffold31334 |
59174 |
59231 |
+ |
(TATAAT)n |
Simple_repeat |
| scaffold31334 |
60424 |
60727 |
- |
PL321 |
Unspecified |
| scaffold31334 |
61410 |
61461 |
+ |
(ACCCG)n |
Simple_repeat |
| scaffold31334 |
61555 |
61699 |
+ |
RS10060 |
Unspecified |
| scaffold31334 |
61694 |
61841 |
+ |
RS7428 |
Unspecified |
| scaffold31334 |
61887 |
61911 |
+ |
(A)n |
Simple_repeat |
| scaffold31334 |
62024 |
62398 |
+ |
RS29 |
Unspecified |
| scaffold31334 |
62505 |
62735 |
- |
PL589 |
Unspecified |
| scaffold31334 |
63371 |
63509 |
- |
PL589 |
Unspecified |
| scaffold31334 |
63587 |
63659 |
+ |
RS10060 |
Unspecified |
| scaffold31334 |
63788 |
63879 |
+ |
(ATCCGAT)n |
Simple_repeat |
| scaffold31334 |
63986 |
64037 |
+ |
(TATGTAT)n |
Simple_repeat |
| scaffold31334 |
64353 |
64361 |
+ |
(TTTGT)n |
Simple_repeat |
| scaffold31334 |
64362 |
64418 |
+ |
(T)n |
Simple_repeat |
| scaffold31334 |
64423 |
64536 |
+ |
(ATATTCGG)n |
Simple_repeat |
| scaffold31334 |
66006 |
66035 |
+ |
(ACCCGA)n |
Simple_repeat |
| scaffold31334 |
66218 |
66271 |
+ |
(TATTTAA)n |
Simple_repeat |
| scaffold31334 |
66389 |
66415 |
+ |
A-rich |
Low_complexity |
| scaffold31334 |
66855 |
66937 |
+ |
RS5397 |
Unspecified |
| scaffold31334 |
66946 |
67048 |
+ |
RS10062 |
Unspecified |
| scaffold31334 |
67063 |
67086 |
+ |
(CGA)n |
Simple_repeat |
| scaffold31334 |
67225 |
67375 |
- |
LTR-1_SBi-LTR |
LTR |
| scaffold31334 |
67425 |
67502 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold31334 |
67604 |
67733 |
- |
RS64 |
Unspecified |
| scaffold31334 |
68375 |
68869 |
+ |
RS10713 |
Unspecified |
| scaffold31334 |
68927 |
69121 |
- |
PL636 |
Unspecified |
| scaffold31334 |
69112 |
69879 |
+ |
Gypsy-2_Mad-I |
LTR/Gypsy |
| scaffold31334 |
70431 |
70521 |
+ |
(ATTTTT)n |
Simple_repeat |
| scaffold31334 |
70758 |
70861 |
+ |
(CTACATA)n |
Simple_repeat |
| scaffold31334 |
71147 |
71582 |
+ |
PL494 |
Unspecified |
| scaffold31334 |
71198 |
71725 |
- |
PL919 |
Unspecified |
| scaffold31334 |
71727 |
71870 |
+ |
RS115 |
Unspecified |
| scaffold31334 |
71872 |
72062 |
+ |
PL941 |
Unspecified |
| scaffold31334 |
72076 |
72271 |
- |
PL350 |
Unspecified |
| scaffold31334 |
72271 |
72451 |
+ |
PL941 |
Unspecified |
| scaffold31334 |
72465 |
72942 |
- |
PL350 |
Unspecified |
| scaffold31334 |
72992 |
73072 |
+ |
A-rich |
Low_complexity |