scaffold3136 Repeat List
genome start end strand repeat-name repeat-class
scaffold3136 2 201 + PL917 Unspecified
scaffold3136 187 312 + PL798 Unspecified
scaffold3136 7428 7451 + (A)n Simple_repeat
scaffold3136 7937 7960 + (A)n Simple_repeat
scaffold3136 7974 8042 + A-rich Low_complexity
scaffold3136 8244 8273 + (T)n Simple_repeat
scaffold3136 8393 8414 + (AAT)n Simple_repeat
scaffold3136 8734 9271 + PL681 Unspecified
scaffold3136 9503 9648 + (A)n Simple_repeat
scaffold3136 9610 9648 + (A)n Simple_repeat
scaffold3136 9800 10931 + RS497 Unspecified
scaffold3136 11485 11537 + (ATA)n Simple_repeat
scaffold3136 11773 12390 + RS665 Unspecified
scaffold3136 12385 12509 - PL169 Unspecified
scaffold3136 12869 13125 - RS1 Unspecified
scaffold3136 13322 13354 + (TA)n Simple_repeat
scaffold3136 14689 14721 + (GGAGGT)n Simple_repeat
scaffold3136 15095 15115 + (T)n Simple_repeat
scaffold3136 15273 15312 + G-rich Low_complexity
scaffold3136 15352 15383 + (ATT)n Simple_repeat
scaffold3136 16733 18372 - Copia-93_VV-I LTR/Copia
scaffold3136 18807 20042 - Copia-93_VV-I LTR/Copia
scaffold3136 20518 20623 - Copia-93_VV-I LTR/Copia
scaffold3136 20599 20826 - ATCopia12I LTR/Copia
scaffold3136 21699 21943 - PL630 Unspecified
scaffold3136 22738 22953 + RS3691 Unspecified
scaffold3136 22957 24599 - Copia-31_GM-I LTR/Copia
scaffold3136 24962 26413 - TY1_Copia TY1_Copia(TransposonPSI)
scaffold3136 25113 26365 - Copia-31_GM-I LTR/Copia
scaffold3136 26510 26725 + RS3691 Unspecified
scaffold3136 27150 27189 + (T)n Simple_repeat
scaffold3136 27470 27861 + RS922 Unspecified
scaffold3136 27897 28676 + hAT-3_PTr DNA/hAT-Ac
scaffold3136 29195 29420 + hAT-20_Mad DNA/hAT-Ac
scaffold3136 29426 29431 + (TATT)n Simple_repeat
scaffold3136 29432 29453 + (T)n Simple_repeat
scaffold3136 29454 29532 + (TATT)n Simple_repeat
scaffold3136 29644 29744 - RS1799 Unspecified
scaffold3136 30981 31489 - PL465 Unspecified
scaffold3136 31586 31674 + A-rich Low_complexity
scaffold3136 31687 31795 + RS1616 Unspecified
scaffold3136 31795 32163 + RS9782 Unspecified
scaffold3136 32861 33266 + RS5490 Unspecified
scaffold3136 33084 33325 + RS9442 Unspecified
scaffold3136 33581 33770 + RS4 Unspecified
scaffold3136 34464 34496 + (AATC)n Simple_repeat
scaffold3136 34741 34786 + G-rich Low_complexity
scaffold3136 34992 35036 + (TGT)n Simple_repeat
scaffold3136 36182 36213 + (TA)n Simple_repeat
scaffold3136 36592 36650 + (ATTTATA)n Simple_repeat
scaffold3136 36805 36827 + (T)n Simple_repeat
scaffold3136 36840 37293 + RS16611 Unspecified
scaffold3136 37303 37480 + RS15912 Unspecified
scaffold3136 38762 40063 - LINE LINE(TransposonPSI)
scaffold3136 38873 39688 - SHALINE17_MT LINE/L1
scaffold3136 40751 40978 - RS98 Unspecified
scaffold3136 40976 41053 - RS12449 Unspecified
scaffold3136 41053 41137 + RS4475 Unspecified
scaffold3136 41225 41286 + (GACCC)n Simple_repeat
scaffold3136 41624 41918 + RS1746 Unspecified
scaffold3136 42255 42339 - PL700 Unspecified
scaffold3136 42336 42520 + RS908 Unspecified
scaffold3136 42952 43003 + (TTGAA)n Simple_repeat
scaffold3136 43108 43178 + RS17 Unspecified
scaffold3136 43374 43406 + (TACAAAGT)n Simple_repeat
scaffold3136 44838 44989 + RS12334 Unspecified
scaffold3136 45944 45984 + A-rich Low_complexity
scaffold3136 46440 46464 + (T)n Simple_repeat
scaffold3136 46566 46781 - RS537 Unspecified
scaffold3136 48771 48819 - RS8 Unspecified
scaffold3136 48773 48829 - RS311 Unspecified
scaffold3136 48979 49125 + RS407 Unspecified
scaffold3136 50112 50520 - PL630 Unspecified
scaffold3136 52963 52991 + (A)n Simple_repeat
scaffold3136 53898 53926 + (TATCAT)n Simple_repeat
scaffold3136 55719 55897 + RS908 Unspecified
scaffold3136 56305 56487 + RS7756 Unspecified
scaffold3136 57817 57843 + (T)n Simple_repeat
scaffold3136 59971 59997 + (TCTTT)n Simple_repeat
scaffold3136 60786 61018 - RS18 Unspecified
scaffold3136 61900 61922 + (A)n Simple_repeat
scaffold3136 62272 62454 + RS7756 Unspecified
scaffold3136 63663 63694 + (AACTA)n Simple_repeat
scaffold3136 63856 63885 + (AACTA)n Simple_repeat
scaffold3136 64454 64499 + A-rich Low_complexity
scaffold3136 64660 64687 + (ATA)n Simple_repeat
scaffold3136 66501 66530 + (ATTT)n Simple_repeat
scaffold3136 67040 67200 - RS133 Unspecified
scaffold3136 67327 67859 - PL753 Unspecified
scaffold3136 68043 68066 + (A)n Simple_repeat
scaffold3136 68355 68452 + RS4475 Unspecified
scaffold3136 68415 68484 + RS14970 Unspecified
scaffold3136 68823 68930 - RS11222 Unspecified
scaffold3136 69013 69159 - RS407 Unspecified
scaffold3136 69160 69404 + RS237 Unspecified
scaffold3136 69740 69788 + (TATAA)n Simple_repeat
scaffold3136 69849 69881 + (TA)n Simple_repeat
scaffold3136 70095 70194 - RS15113 Unspecified
scaffold3136 70342 70382 + RS18407 Unspecified
scaffold3136 70351 70719 - RS8 Unspecified
scaffold3136 71318 71361 + (T)n Simple_repeat
scaffold3136 71635 71670 + A-rich Low_complexity
scaffold3136 71954 71999 + (CGTGTC)n Simple_repeat
scaffold3136 80566 80595 + (T)n Simple_repeat
scaffold3136 80927 81016 + RS15763 Unspecified
scaffold3136 81192 81211 + (T)n Simple_repeat
scaffold3136 81528 81917 + RS1931 Unspecified
scaffold3136 85807 86006 + RS10317 Unspecified
scaffold3136 87156 87484 + RS2771 Unspecified
scaffold3136 91079 91278 + RS10317 Unspecified
scaffold3136 92396 92455 + (TGAT)n Simple_repeat
scaffold3136 92469 94087 - Copia-71_VV-I LTR/Copia
scaffold3136 94418 94464 - Copia-71_VV-I LTR/Copia
scaffold3136 94508 95716 - Copia-71_VV-I LTR/Copia
scaffold3136 96050 96480 - Copia-71_VV-I LTR/Copia
scaffold3136 96652 96935 - RS1746 Unspecified
scaffold3136 97318 97377 + (TGAT)n Simple_repeat
scaffold3136 97614 97942 + RS2771 Unspecified
scaffold3136 98319 98418 + Helitron-2_PTr RC/Helitron
scaffold3136 101322 101521 + RS10317 Unspecified
scaffold3136 102569 102666 + (TA)n Simple_repeat
scaffold3136 102870 103069 + RS10317 Unspecified
scaffold3136 104887 104906 + (T)n Simple_repeat
scaffold3136 105212 105394 + PL582 Unspecified
scaffold3136 105830 105854 + (A)n Simple_repeat
scaffold3136 105907 106205 - PL856 Unspecified
scaffold3136 106614 106643 + (GACCC)n Simple_repeat
scaffold3136 108331 108439 - RS1 Unspecified
scaffold3136 116770 116787 + (A)n Simple_repeat
scaffold3136 116872 116900 + (T)n Simple_repeat
scaffold3136 118038 118078 + (TGTTTAA)n Simple_repeat
scaffold3136 118973 119002 + (TTG)n Simple_repeat
scaffold3136 119931 120037 + RS14862 Unspecified
scaffold3136 121409 121437 + (A)n Simple_repeat
scaffold3136 121479 121589 + hAT-17N1_ZM DNA/hAT-Ac
scaffold3136 123760 123796 + (ACCAAT)n Simple_repeat
scaffold3136 124552 124575 + (A)n Simple_repeat
scaffold3136 124800 125059 + RS310 Unspecified
scaffold3136 125745 125887 + RS13117 Unspecified
scaffold3136 125890 126132 + RS5991 Unspecified
scaffold3136 126160 126190 - Copia-7_BRa-I LTR/Copia
scaffold3136 126350 126380 - Copia-7_BRa-I LTR/Copia
scaffold3136 126413 126484 + (T)n Simple_repeat
scaffold3136 126464 126484 + (T)n Simple_repeat
scaffold3136 127131 127273 + RS13117 Unspecified
scaffold3136 127305 127549 + RS5991 Unspecified
scaffold3136 127585 127882 - RS4103 Unspecified
scaffold3136 127585 127932 + RS17792 Unspecified
scaffold3136 128017 128070 + (GTAGA)n Simple_repeat
scaffold3136 128142 128443 + RS385 Unspecified
scaffold3136 128442 128500 + RS14095 Unspecified
scaffold3136 128638 128668 - Copia-7_BRa-I LTR/Copia
scaffold3136 128796 128827 - RS454 Unspecified
scaffold3136 129082 129102 + (T)n Simple_repeat
scaffold3136 129453 129546 + (TTTAA)n Simple_repeat
scaffold3136 129653 129705 + (TTATTTT)n Simple_repeat
scaffold3136 129718 129798 + A-rich Low_complexity
scaffold3136 129970 130034 + (TTAC)n Simple_repeat
scaffold3136 132965 133081 + ZhAT2_ZM DNA/hAT-Tip100
scaffold3136 133189 133249 + HAT-3N2_Mad DNA/hAT-Tip100
scaffold3136 133415 133793 - RS9163 Unspecified
scaffold3136 133718 134002 - RS8673 Unspecified
scaffold3136 134706 134783 + RS10032 Unspecified
scaffold3136 134875 134997 + RS7877 Unspecified
scaffold3136 135122 135234 + (TCATTCA)n Simple_repeat
scaffold3136 135256 135555 - RS454 Unspecified
scaffold3136 135738 135816 + PL6 Unspecified
scaffold3136 137204 137395 + RS14394 Unspecified
scaffold3136 137698 137734 + (CTTCTGA)n Simple_repeat
scaffold3136 137869 137969 - RS5640 Unspecified
scaffold3136 138917 139090 + RS10941 Unspecified
scaffold3136 139108 139456 - RS4113 Unspecified
scaffold3136 139762 140044 - RS342 Unspecified
scaffold3136 140114 140328 + RS6052 Unspecified
scaffold3136 140379 140549 + RS4542 Unspecified
scaffold3136 140401 140604 + RS4974 Unspecified
scaffold3136 140640 140730 + RS4133 Unspecified
scaffold3136 140899 140985 + GA-rich Low_complexity
scaffold3136 141110 141228 + RS11546 Unspecified
scaffold3136 141433 141535 + RS11939 Unspecified
scaffold3136 141689 141731 - RS1746 Unspecified
scaffold3136 141927 141970 + G-rich Low_complexity
scaffold3136 143130 143197 + GA-rich Low_complexity
scaffold3136 143272 143445 - RS12339 Unspecified
scaffold3136 143488 143504 + (T)n Simple_repeat
scaffold3136 143916 143987 + (TTTTATA)n Simple_repeat
scaffold3136 144049 144186 + (CCCGA)n Simple_repeat
scaffold3136 144344 144473 + (CCCGA)n Simple_repeat
scaffold3136 145633 145757 + PL271 Unspecified
scaffold3136 145791 145948 + (CCCGA)n Simple_repeat
scaffold3136 146095 146220 + (CCCGA)n Simple_repeat
scaffold3136 146650 146689 + (GCG)n Simple_repeat
scaffold3136 146929 146977 + (TTGATG)n Simple_repeat
scaffold3136 147113 147148 + (CAGTT)n Simple_repeat
scaffold3136 147467 147511 + (TTTG)n Simple_repeat
scaffold3136 147715 147774 - RS1854 Unspecified
scaffold3136 147826 147926 + RS17243 Unspecified
scaffold3136 149446 149474 + (TTTCT)n Simple_repeat
scaffold3136 151286 151389 + (T)n Simple_repeat
scaffold3136 151286 151306 + (T)n Simple_repeat
scaffold3136 151299 151389 - RS972 Unspecified
scaffold3136 151310 151389 + RS750 Unspecified
scaffold3136 156215 156338 - RS6866 Unspecified
scaffold3136 158382 158412 + (ATTT)n Simple_repeat
scaffold3136 158646 158742 + RS1674 Unspecified
scaffold3136 158793 158917 + (CTGAA)n Simple_repeat
scaffold3136 159969 159985 + (A)n Simple_repeat
scaffold3136 160088 160152 + (CTGAA)n Simple_repeat
scaffold3136 162908 162931 + (A)n Simple_repeat
scaffold3136 163524 163563 + (TTTA)n Simple_repeat
scaffold3136 164073 164189 + V1_LTR LTR/Gypsy
scaffold3136 165053 165078 + (TTTA)n Simple_repeat
scaffold3136 165295 165320 + (TTTA)n Simple_repeat
scaffold3136 168050 168231 - RS178 Unspecified
scaffold3136 168878 168959 - RS285 Unspecified
scaffold3136 168963 168997 - RS285 Unspecified
scaffold3136 169500 169527 + (TCA)n Simple_repeat
scaffold3136 170381 170454 + LT1_EPa LTR?
scaffold3136 172194 172308 + RS5264 Unspecified
scaffold3136 172402 172638 + RS9547 Unspecified
scaffold3136 174269 174364 - RS18358 Unspecified
scaffold3136 175057 175073 + (A)n Simple_repeat
scaffold3136 178768 178908 - RS2611 Unspecified
scaffold3136 178867 178982 + RS7065 Unspecified
scaffold3136 179045 179158 + RS9228 Unspecified
scaffold3136 179251 179334 + (CGAAT)n Simple_repeat
scaffold3136 179542 179685 - RS8054 Unspecified
scaffold3136 180640 180735 - RS15063 Unspecified
scaffold3136 180738 180922 + (AAAATA)n Simple_repeat
scaffold3136 180882 180922 + (AAAATA)n Simple_repeat
scaffold3136 180924 181218 - RS15063 Unspecified
scaffold3136 181570 181655 - PL479 Unspecified
scaffold3136 181763 181797 + (T)n Simple_repeat
scaffold3136 181816 182189 - RS15063 Unspecified
scaffold3136 183186 183204 + (T)n Simple_repeat
scaffold3136 183465 183507 + (ATTTTT)n Simple_repeat
scaffold3136 183552 183579 + (T)n Simple_repeat
scaffold3136 183711 183728 + (TCT)n Simple_repeat
scaffold3136 183775 183803 + (T)n Simple_repeat
scaffold3136 184319 184462 - RS15622 Unspecified
scaffold3136 184548 184668 - RS17640 Unspecified
scaffold3136 185003 185169 - RS11897 Unspecified
scaffold3136 186250 186336 + RS7628 Unspecified
scaffold3136 186740 186790 + (TTTT)n Simple_repeat
scaffold3136 187002 187318 - RS2761 Unspecified
scaffold3136 187495 187660 + RS17967 Unspecified
scaffold3136 187669 187900 - RS7992 Unspecified
scaffold3136 188067 188211 - RS4 Unspecified
scaffold3136 188381 188426 + (TTTATT)n Simple_repeat
scaffold3136 188502 188939 + PL400 Unspecified
scaffold3136 189052 189136 - HAT-10_Mad DNA/hAT-Ac
scaffold3136 189507 189924 - RS3147 Unspecified
scaffold3136 189641 190275 - RS1427 Unspecified
scaffold3136 193618 193997 - RS2771 Unspecified
scaffold3136 194013 194073 + RS3419 Unspecified
scaffold3136 194100 194159 - RS2771 Unspecified
scaffold3136 194168 194402 - RS1509 Unspecified
scaffold3136 194430 194852 + RS2680 Unspecified
scaffold3136 195025 195192 - RS4004 Unspecified
scaffold3136 195199 195487 - RS3661 Unspecified
scaffold3136 195440 195597 - RS2540 Unspecified
scaffold3136 195491 195616 - RS1961 Unspecified
scaffold3136 195509 195634 - RS6113 Unspecified
scaffold3136 195636 195801 - RS1373 Unspecified
scaffold3136 195800 195965 - RS2761 Unspecified