scaffold3189 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold3189 |
2 |
790 |
+ |
gypsy |
gypsy(TransposonPSI) |
| scaffold3189 |
51 |
351 |
+ |
Gyp_I_MT-int |
LTR/Gypsy |
| scaffold3189 |
522 |
701 |
+ |
Gyp_I_MT-int |
LTR/Gypsy |
| scaffold3189 |
2843 |
4243 |
- |
PL888 |
Unspecified |
| scaffold3189 |
3303 |
4743 |
+ |
PL554 |
Unspecified |
| scaffold3189 |
4282 |
5107 |
+ |
PL921 |
Unspecified |
| scaffold3189 |
4509 |
5656 |
+ |
RS3063 |
Unspecified |
| scaffold3189 |
5291 |
5699 |
+ |
PL495 |
Unspecified |
| scaffold3189 |
6737 |
6800 |
+ |
A-rich |
Low_complexity |
| scaffold3189 |
7936 |
8019 |
+ |
(ATAC)n |
Simple_repeat |
| scaffold3189 |
9179 |
9411 |
- |
PL647 |
Unspecified |
| scaffold3189 |
10115 |
10174 |
- |
Copia-81_GM-I |
LTR/Copia |
| scaffold3189 |
10832 |
11045 |
- |
RS13321 |
Unspecified |
| scaffold3189 |
11505 |
11538 |
+ |
(ATAAGC)n |
Simple_repeat |
| scaffold3189 |
12506 |
12527 |
+ |
(TAAA)n |
Simple_repeat |
| scaffold3189 |
13274 |
13776 |
- |
RS169 |
Unspecified |
| scaffold3189 |
13834 |
15178 |
+ |
RS369 |
Unspecified |
| scaffold3189 |
15175 |
15221 |
+ |
(TTCACTA)n |
Simple_repeat |
| scaffold3189 |
15222 |
15927 |
+ |
PL951 |
Unspecified |
| scaffold3189 |
15970 |
16020 |
+ |
A-rich |
Low_complexity |
| scaffold3189 |
16092 |
16148 |
+ |
(TTTTCAT)n |
Simple_repeat |
| scaffold3189 |
16305 |
16366 |
+ |
A-rich |
Low_complexity |
| scaffold3189 |
16753 |
16814 |
+ |
(TAT)n |
Simple_repeat |
| scaffold3189 |
16934 |
17673 |
- |
PL166 |
Unspecified |
| scaffold3189 |
17668 |
18285 |
- |
RS2436 |
Unspecified |
| scaffold3189 |
17752 |
18521 |
- |
RS4822 |
Unspecified |
| scaffold3189 |
22780 |
22916 |
- |
RS3321 |
Unspecified |
| scaffold3189 |
22911 |
22957 |
+ |
PL196 |
Unspecified |
| scaffold3189 |
22915 |
22999 |
+ |
(TTATAAGA)n |
Simple_repeat |
| scaffold3189 |
22960 |
22999 |
+ |
(TTATAAGA)n |
Simple_repeat |
| scaffold3189 |
23351 |
23389 |
+ |
(ATATTA)n |
Simple_repeat |
| scaffold3189 |
24369 |
24402 |
+ |
A-rich |
Low_complexity |
| scaffold3189 |
24947 |
25004 |
+ |
(TAATT)n |
Simple_repeat |
| scaffold3189 |
25206 |
25244 |
+ |
A-rich |
Low_complexity |
| scaffold3189 |
25489 |
25635 |
- |
RS8 |
Unspecified |
| scaffold3189 |
25640 |
26110 |
+ |
LINE |
LINE(TransposonPSI) |
| scaffold3189 |
26764 |
26806 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold3189 |
26808 |
26988 |
+ |
RS13321 |
Unspecified |
| scaffold3189 |
27413 |
28676 |
+ |
RIRE1_I-int |
LTR/Copia |
| scaffold3189 |
28763 |
29271 |
+ |
RIRE1_I-int |
LTR/Copia |
| scaffold3189 |
29272 |
29363 |
+ |
(TAT)n |
Simple_repeat |
| scaffold3189 |
29364 |
29399 |
+ |
RIRE1_I-int |
LTR/Copia |
| scaffold3189 |
30078 |
30196 |
- |
RS13742 |
Unspecified |
| scaffold3189 |
30109 |
30230 |
+ |
RS16244 |
Unspecified |
| scaffold3189 |
30668 |
30782 |
+ |
RS17816 |
Unspecified |
| scaffold3189 |
30982 |
31032 |
+ |
(TA)n |
Simple_repeat |
| scaffold3189 |
31814 |
31846 |
+ |
(TTATTT)n |
Simple_repeat |
| scaffold3189 |
32076 |
32591 |
- |
PL473 |
Unspecified |
| scaffold3189 |
32395 |
32615 |
- |
PL301 |
Unspecified |
| scaffold3189 |
33714 |
33822 |
+ |
RS17536 |
Unspecified |
| scaffold3189 |
35216 |
35431 |
+ |
LINE |
LINE(TransposonPSI) |
| scaffold3189 |
35767 |
36034 |
- |
LTR-1_SBi-LTR |
LTR |
| scaffold3189 |
36273 |
36545 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold3189 |
36368 |
36427 |
+ |
PL411 |
Unspecified |
| scaffold3189 |
38797 |
38836 |
+ |
(GTTT)n |
Simple_repeat |
| scaffold3189 |
39125 |
39435 |
- |
RS1111 |
Unspecified |
| scaffold3189 |
39981 |
40000 |
+ |
(T)n |
Simple_repeat |
| scaffold3189 |
40401 |
40700 |
+ |
RS513 |
Unspecified |
| scaffold3189 |
41274 |
41320 |
+ |
(TTAATAA)n |
Simple_repeat |
| scaffold3189 |
41691 |
41722 |
+ |
(T)n |
Simple_repeat |
| scaffold3189 |
42206 |
42288 |
+ |
(TTCAA)n |
Simple_repeat |
| scaffold3189 |
42709 |
42788 |
+ |
(T)n |
Simple_repeat |
| scaffold3189 |
42864 |
42915 |
+ |
A-rich |
Low_complexity |
| scaffold3189 |
44723 |
44819 |
- |
PL737 |
Unspecified |
| scaffold3189 |
44881 |
44959 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold3189 |
45047 |
45104 |
+ |
(CCCGG)n |
Simple_repeat |
| scaffold3189 |
45221 |
45273 |
+ |
A-rich |
Low_complexity |
| scaffold3189 |
46027 |
46059 |
+ |
(T)n |
Simple_repeat |
| scaffold3189 |
48131 |
48638 |
- |
RS1275 |
Unspecified |
| scaffold3189 |
48753 |
50677 |
- |
Copia-101_Mad-I |
LTR/Copia |
| scaffold3189 |
50838 |
51135 |
- |
Copia-101_Mad-I |
LTR/Copia |
| scaffold3189 |
51133 |
52535 |
- |
RS3764 |
Unspecified |
| scaffold3189 |
52449 |
53459 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold3189 |
52536 |
53432 |
- |
Copia-101_Mad-I |
LTR/Copia |
| scaffold3189 |
53453 |
53608 |
- |
RS1267 |
Unspecified |
| scaffold3189 |
53531 |
53755 |
- |
RS1267 |
Unspecified |
| scaffold3189 |
54249 |
54627 |
- |
RS1267 |
Unspecified |
| scaffold3189 |
54641 |
54810 |
- |
Copia-101_Mad-I |
LTR/Copia |
| scaffold3189 |
54881 |
55049 |
- |
Copia-101_Mad-I |
LTR/Copia |
| scaffold3189 |
55372 |
55541 |
- |
RS1296 |
Unspecified |
| scaffold3189 |
56000 |
56046 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold3189 |
56740 |
56787 |
+ |
Copia-61_GM-I |
LTR/Copia |