scaffold321 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold321 |
485 |
526 |
- |
Gypsy-23_VV-I |
LTR/Gypsy |
| scaffold321 |
5539 |
5970 |
+ |
PL580 |
Unspecified |
| scaffold321 |
5983 |
6078 |
+ |
(T)n |
Simple_repeat |
| scaffold321 |
9308 |
9320 |
+ |
A-rich |
Low_complexity |
| scaffold321 |
9321 |
9345 |
+ |
(A)n |
Simple_repeat |
| scaffold321 |
10157 |
10311 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold321 |
10327 |
10432 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold321 |
10749 |
10981 |
+ |
RS2818 |
Unspecified |
| scaffold321 |
11239 |
11292 |
+ |
(ATTAA)n |
Simple_repeat |
| scaffold321 |
11590 |
11854 |
- |
RS1043 |
Unspecified |
| scaffold321 |
12078 |
12101 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold321 |
12106 |
12342 |
- |
RS214 |
Unspecified |
| scaffold321 |
12326 |
12553 |
+ |
RS672 |
Unspecified |
| scaffold321 |
17686 |
17742 |
+ |
(AAC)n |
Simple_repeat |
| scaffold321 |
17874 |
17957 |
+ |
(CA)n |
Simple_repeat |
| scaffold321 |
18065 |
18101 |
+ |
(TACAAT)n |
Simple_repeat |
| scaffold321 |
18325 |
18485 |
+ |
(ATG)n |
Simple_repeat |
| scaffold321 |
18703 |
18928 |
- |
RS2297 |
Unspecified |
| scaffold321 |
18746 |
18928 |
- |
RS2297 |
Unspecified |
| scaffold321 |
19021 |
19062 |
+ |
A-rich |
Low_complexity |
| scaffold321 |
19514 |
19548 |
+ |
A-rich |
Low_complexity |
| scaffold321 |
22570 |
22603 |
+ |
(ACAGAA)n |
Simple_repeat |
| scaffold321 |
25591 |
26799 |
+ |
RS869 |
Unspecified |
| scaffold321 |
26805 |
26992 |
+ |
PL530 |
Unspecified |
| scaffold321 |
27330 |
27750 |
+ |
PL530 |
Unspecified |
| scaffold321 |
27752 |
28984 |
+ |
RS869 |
Unspecified |
| scaffold321 |
28320 |
29065 |
+ |
RS3462 |
Unspecified |
| scaffold321 |
29274 |
29394 |
+ |
RS3462 |
Unspecified |
| scaffold321 |
29279 |
29385 |
+ |
RS1447 |
Unspecified |
| scaffold321 |
29279 |
29414 |
- |
PL355 |
Unspecified |
| scaffold321 |
29665 |
30101 |
+ |
RS1361 |
Unspecified |
| scaffold321 |
29746 |
30101 |
- |
RS52 |
Unspecified |
| scaffold321 |
30104 |
30717 |
- |
Copia-99_GM-I |
LTR/Copia |
| scaffold321 |
31081 |
31117 |
+ |
(CCCCT)n |
Simple_repeat |
| scaffold321 |
31273 |
31299 |
+ |
(T)n |
Simple_repeat |
| scaffold321 |
31300 |
31360 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold321 |
31650 |
31713 |
+ |
(AAT)n |
Simple_repeat |
| scaffold321 |
31722 |
31980 |
- |
RS1056 |
Unspecified |
| scaffold321 |
32097 |
32195 |
+ |
(GACGAA)n |
Simple_repeat |
| scaffold321 |
32339 |
32396 |
+ |
(T)n |
Simple_repeat |
| scaffold321 |
32697 |
32742 |
+ |
(TAA)n |
Simple_repeat |
| scaffold321 |
32835 |
32871 |
- |
RS290 |
Unspecified |
| scaffold321 |
32841 |
33147 |
+ |
RS290 |
Unspecified |
| scaffold321 |
33562 |
33793 |
+ |
RS2105 |
Unspecified |
| scaffold321 |
33798 |
34061 |
+ |
RS356 |
Unspecified |
| scaffold321 |
34059 |
34334 |
+ |
RS2105 |
Unspecified |
| scaffold321 |
34577 |
34840 |
+ |
RS41 |
Unspecified |
| scaffold321 |
35122 |
35178 |
+ |
(AATTA)n |
Simple_repeat |
| scaffold321 |
36168 |
36259 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold321 |
36568 |
36659 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold321 |
37503 |
37726 |
- |
RS14079 |
Unspecified |
| scaffold321 |
37914 |
37934 |
+ |
(T)n |
Simple_repeat |
| scaffold321 |
38082 |
38137 |
+ |
(AAT)n |
Simple_repeat |
| scaffold321 |
38159 |
38306 |
+ |
PL322 |
Unspecified |
| scaffold321 |
38377 |
38431 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold321 |
38566 |
38592 |
+ |
A-rich |
Low_complexity |
| scaffold321 |
38798 |
38840 |
+ |
(ATATTTT)n |
Simple_repeat |
| scaffold321 |
41604 |
42030 |
- |
RS458 |
Unspecified |
| scaffold321 |
42289 |
42673 |
- |
RS458 |
Unspecified |
| scaffold321 |
43093 |
43305 |
+ |
PL859 |
Unspecified |
| scaffold321 |
43303 |
43452 |
+ |
RS2812 |
Unspecified |
| scaffold321 |
43393 |
43574 |
+ |
RS10325 |
Unspecified |
| scaffold321 |
43616 |
43659 |
+ |
(A)n |
Simple_repeat |
| scaffold321 |
43896 |
44059 |
+ |
RS5760 |
Unspecified |
| scaffold321 |
44084 |
44158 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold321 |
44140 |
44206 |
+ |
(TTTGA)n |
Simple_repeat |
| scaffold321 |
45668 |
45700 |
+ |
(ATTGCT)n |
Simple_repeat |
| scaffold321 |
46149 |
46177 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold321 |
46267 |
46408 |
+ |
RS622 |
Unspecified |
| scaffold321 |
46863 |
46902 |
+ |
(TAGA)n |
Simple_repeat |
| scaffold321 |
47190 |
47210 |
+ |
(A)n |
Simple_repeat |
| scaffold321 |
47351 |
47555 |
- |
RS60 |
Unspecified |
| scaffold321 |
48022 |
48202 |
+ |
RS586 |
Unspecified |
| scaffold321 |
48568 |
48589 |
+ |
(A)n |
Simple_repeat |
| scaffold321 |
49267 |
49372 |
+ |
RS586 |
Unspecified |
| scaffold321 |
49267 |
49386 |
- |
RS18072 |
Unspecified |
| scaffold321 |
50215 |
50259 |
+ |
(ATTTTT)n |
Simple_repeat |
| scaffold321 |
50469 |
50737 |
+ |
RS2914 |
Unspecified |
| scaffold321 |
50687 |
50798 |
+ |
RS13963 |
Unspecified |
| scaffold321 |
52063 |
52103 |
+ |
(TTAATA)n |
Simple_repeat |
| scaffold321 |
53599 |
53692 |
+ |
(ATAAT)n |
Simple_repeat |
| scaffold321 |
54538 |
54601 |
+ |
A-rich |
Low_complexity |
| scaffold321 |
54606 |
54855 |
+ |
RS18125 |
Unspecified |
| scaffold321 |
55161 |
55273 |
+ |
RS736 |
Unspecified |
| scaffold321 |
56639 |
56676 |
+ |
(CCGAG)n |
Simple_repeat |
| scaffold321 |
57336 |
57360 |
+ |
(AATT)n |
Simple_repeat |
| scaffold321 |
57372 |
57419 |
+ |
(TAA)n |
Simple_repeat |
| scaffold321 |
57452 |
57472 |
+ |
(AAT)n |
Simple_repeat |
| scaffold321 |
58374 |
58402 |
+ |
A-rich |
Low_complexity |
| scaffold321 |
61853 |
61872 |
+ |
(A)n |
Simple_repeat |
| scaffold321 |
61874 |
61982 |
+ |
RS8 |
Unspecified |
| scaffold321 |
63178 |
63399 |
+ |
RS17401 |
Unspecified |
| scaffold321 |
63590 |
63739 |
+ |
RS12595 |
Unspecified |
| scaffold321 |
64278 |
64506 |
+ |
RS17401 |
Unspecified |
| scaffold321 |
64821 |
64971 |
+ |
RS12595 |
Unspecified |
| scaffold321 |
65061 |
65184 |
+ |
RS12378 |
Unspecified |
| scaffold321 |
65195 |
65410 |
- |
RS3691 |
Unspecified |
| scaffold321 |
65507 |
66958 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold321 |
65555 |
66759 |
+ |
Copia-93_VV-I |
LTR/Copia |
| scaffold321 |
67316 |
68618 |
+ |
Copia-93_VV-I |
LTR/Copia |
| scaffold321 |
68721 |
68840 |
+ |
G-rich |
Low_complexity |
| scaffold321 |
69048 |
69263 |
- |
RS3691 |
Unspecified |
| scaffold321 |
69436 |
69509 |
- |
RS432 |
Unspecified |
| scaffold321 |
70055 |
70233 |
+ |
RS13873 |
Unspecified |
| scaffold321 |
70251 |
70471 |
+ |
RS9624 |
Unspecified |
| scaffold321 |
71507 |
71685 |
+ |
RS14167 |
Unspecified |
| scaffold321 |
71811 |
72129 |
+ |
RS3221 |
Unspecified |
| scaffold321 |
72150 |
72245 |
- |
RS16382 |
Unspecified |
| scaffold321 |
72748 |
72941 |
+ |
RS673 |
Unspecified |
| scaffold321 |
72939 |
73043 |
- |
PL654 |
Unspecified |
| scaffold321 |
73501 |
73520 |
+ |
(A)n |
Simple_repeat |
| scaffold321 |
75630 |
75656 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold321 |
75996 |
76037 |
+ |
(TT)n |
Simple_repeat |
| scaffold321 |
76793 |
76859 |
+ |
(T)n |
Simple_repeat |
| scaffold321 |
77211 |
77354 |
- |
RS12541 |
Unspecified |
| scaffold321 |
83497 |
83715 |
- |
RS311 |
Unspecified |
| scaffold321 |
83711 |
83844 |
+ |
RS3322 |
Unspecified |
| scaffold321 |
83755 |
84192 |
- |
RS1385 |
Unspecified |
| scaffold321 |
83959 |
84396 |
+ |
RS1047 |
Unspecified |
| scaffold321 |
84692 |
84754 |
+ |
(AATCTT)n |
Simple_repeat |
| scaffold321 |
84800 |
84887 |
+ |
RS1681 |
Unspecified |
| scaffold321 |
85269 |
85327 |
+ |
(TATTTA)n |
Simple_repeat |
| scaffold321 |
85678 |
85717 |
+ |
(TTTTAT)n |
Simple_repeat |
| scaffold321 |
85718 |
85744 |
+ |
(TATT)n |
Simple_repeat |
| scaffold321 |
85848 |
85939 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold321 |
85960 |
86099 |
+ |
(TAT)n |
Simple_repeat |
| scaffold321 |
86268 |
86302 |
+ |
(ATA)n |
Simple_repeat |
| scaffold321 |
86303 |
86370 |
+ |
(AAC)n |
Simple_repeat |
| scaffold321 |
86371 |
86397 |
+ |
(ATA)n |
Simple_repeat |
| scaffold321 |
86398 |
86550 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold321 |
88307 |
88349 |
+ |
(AATT)n |
Simple_repeat |
| scaffold321 |
89277 |
89326 |
+ |
A-rich |
Low_complexity |
| scaffold321 |
89342 |
89484 |
+ |
RS1798 |
Unspecified |
| scaffold321 |
89389 |
89501 |
+ |
RS5935 |
Unspecified |
| scaffold321 |
90137 |
90578 |
+ |
PL2 |
Unspecified |
| scaffold321 |
90715 |
91054 |
- |
RS17939 |
Unspecified |
| scaffold321 |
91055 |
91099 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold321 |
91430 |
92979 |
- |
Copia-71_VV-I |
LTR/Copia |
| scaffold321 |
176865 |
176978 |
+ |
A-rich |
Low_complexity |