scaffold3247 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold3247 |
364 |
432 |
+ |
Copia-31_GM-I |
LTR/Copia |
| scaffold3247 |
1092 |
1144 |
+ |
A-rich |
Low_complexity |
| scaffold3247 |
3317 |
3384 |
+ |
A-rich |
Low_complexity |
| scaffold3247 |
3456 |
3859 |
+ |
PL261 |
Unspecified |
| scaffold3247 |
3861 |
5517 |
- |
RS254 |
Unspecified |
| scaffold3247 |
5846 |
5868 |
+ |
(A)n |
Simple_repeat |
| scaffold3247 |
6786 |
6837 |
- |
RS3561 |
Unspecified |
| scaffold3247 |
8008 |
8403 |
+ |
RS4448 |
Unspecified |
| scaffold3247 |
14873 |
15033 |
+ |
Copia-85_ST-I |
LTR/Copia |
| scaffold3247 |
15300 |
15530 |
+ |
Copia-85_ST-I |
LTR/Copia |
| scaffold3247 |
15711 |
15744 |
+ |
(TATT)n |
Simple_repeat |
| scaffold3247 |
16276 |
16310 |
+ |
A-rich |
Low_complexity |
| scaffold3247 |
16402 |
16719 |
+ |
RS257 |
Unspecified |
| scaffold3247 |
16856 |
16900 |
+ |
(TAT)n |
Simple_repeat |
| scaffold3247 |
17671 |
17971 |
- |
RS58 |
Unspecified |
| scaffold3247 |
18090 |
18119 |
+ |
A-rich |
Low_complexity |
| scaffold3247 |
18553 |
18579 |
+ |
(TAA)n |
Simple_repeat |
| scaffold3247 |
18598 |
18622 |
+ |
(A)n |
Simple_repeat |
| scaffold3247 |
18718 |
18850 |
- |
LTR-1_SBi-LTR |
LTR |
| scaffold3247 |
18757 |
18872 |
+ |
MIDWAY |
DNA/hAT-Tip100 |
| scaffold3247 |
19090 |
19129 |
+ |
(TTTACGA)n |
Simple_repeat |
| scaffold3247 |
19456 |
19548 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold3247 |
19602 |
20456 |
- |
RS334 |
Unspecified |
| scaffold3247 |
20814 |
20860 |
+ |
(ATATTC)n |
Simple_repeat |
| scaffold3247 |
21313 |
21488 |
+ |
RS2734 |
Unspecified |
| scaffold3247 |
21487 |
21837 |
- |
RS42 |
Unspecified |
| scaffold3247 |
21861 |
21934 |
+ |
(ATA)n |
Simple_repeat |
| scaffold3247 |
22356 |
22480 |
+ |
(ATT)n |
Simple_repeat |
| scaffold3247 |
23108 |
23308 |
- |
PL642 |
Unspecified |
| scaffold3247 |
23993 |
24049 |
+ |
(ATTTTG)n |
Simple_repeat |
| scaffold3247 |
24402 |
24440 |
+ |
(ACTTAC)n |
Simple_repeat |
| scaffold3247 |
24467 |
24500 |
+ |
(TCTTC)n |
Simple_repeat |
| scaffold3247 |
24612 |
24646 |
+ |
(TTACA)n |
Simple_repeat |
| scaffold3247 |
24644 |
24681 |
+ |
(TAC)n |
Simple_repeat |
| scaffold3247 |
24682 |
24722 |
+ |
(AACTAC)n |
Simple_repeat |
| scaffold3247 |
24815 |
24846 |
+ |
(TCT)n |
Simple_repeat |
| scaffold3247 |
25631 |
25682 |
+ |
A-rich |
Low_complexity |
| scaffold3247 |
26096 |
26154 |
+ |
A-rich |
Low_complexity |
| scaffold3247 |
26345 |
27129 |
- |
PL563 |
Unspecified |
| scaffold3247 |
27129 |
27285 |
+ |
PL735 |
Unspecified |
| scaffold3247 |
27524 |
27584 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold3247 |
27898 |
28459 |
+ |
Copia-4_SL-LTR |
LTR/Copia |
| scaffold3247 |
28686 |
28772 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold3247 |
28781 |
28866 |
+ |
(ATA)n |
Simple_repeat |
| scaffold3247 |
29627 |
30511 |
+ |
LINE |
LINE(TransposonPSI) |
| scaffold3247 |
31960 |
31980 |
+ |
(A)n |
Simple_repeat |
| scaffold3247 |
31981 |
32055 |
+ |
(AAT)n |
Simple_repeat |
| scaffold3247 |
32180 |
32292 |
- |
RS2734 |
Unspecified |
| scaffold3247 |
32840 |
32893 |
+ |
HAT-14_Mad |
DNA/hAT-Tip100 |
| scaffold3247 |
32959 |
33000 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold3247 |
33400 |
33425 |
+ |
(A)n |
Simple_repeat |
| scaffold3247 |
35431 |
35751 |
- |
RS1842 |
Unspecified |
| scaffold3247 |
36187 |
36302 |
- |
ATCopia90_I-int |
LTR/Copia |
| scaffold3247 |
36319 |
36432 |
- |
ATCopia90_I-int |
LTR/Copia |
| scaffold3247 |
37979 |
38044 |
+ |
(TTTAATT)n |
Simple_repeat |
| scaffold3247 |
38104 |
38156 |
+ |
(TTCACTA)n |
Simple_repeat |
| scaffold3247 |
38164 |
38359 |
+ |
(TTATAC)n |
Simple_repeat |
| scaffold3247 |
38839 |
38914 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold3247 |
39221 |
39278 |
+ |
(AAGAAT)n |
Simple_repeat |
| scaffold3247 |
39434 |
39477 |
+ |
A-rich |
Low_complexity |
| scaffold3247 |
39498 |
39915 |
- |
PL143 |
Unspecified |
| scaffold3247 |
40027 |
40060 |
+ |
A-rich |
Low_complexity |
| scaffold3247 |
40459 |
40492 |
+ |
(GTATTT)n |
Simple_repeat |
| scaffold3247 |
40508 |
40552 |
+ |
A-rich |
Low_complexity |
| scaffold3247 |
40563 |
41485 |
+ |
PL445 |
Unspecified |
| scaffold3247 |
41935 |
41970 |
- |
Copia22-VV_I-int |
LTR/Copia |
| scaffold3247 |
42061 |
42106 |
+ |
(AATTA)n |
Simple_repeat |
| scaffold3247 |
43207 |
43236 |
+ |
(CAGACT)n |
Simple_repeat |
| scaffold3247 |
43290 |
43363 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold3247 |
43707 |
43755 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold3247 |
44114 |
44154 |
+ |
A-rich |
Low_complexity |
| scaffold3247 |
44291 |
44334 |
+ |
A-rich |
Low_complexity |
| scaffold3247 |
44736 |
44771 |
+ |
(TCAGG)n |
Simple_repeat |
| scaffold3247 |
45137 |
45186 |
+ |
(T)n |
Simple_repeat |
| scaffold3247 |
45279 |
45306 |
+ |
(ATATT)n |
Simple_repeat |
| scaffold3247 |
45372 |
45822 |
- |
PL477 |
Unspecified |
| scaffold3247 |
45823 |
45842 |
+ |
(A)n |
Simple_repeat |
| scaffold3247 |
46000 |
46053 |
+ |
GA-rich |
Low_complexity |
| scaffold3247 |
47921 |
48406 |
- |
PL793 |
Unspecified |
| scaffold3247 |
48547 |
48578 |
+ |
A-rich |
Low_complexity |
| scaffold3247 |
48768 |
48833 |
+ |
(ATCTCAA)n |
Simple_repeat |
| scaffold3247 |
49673 |
49721 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold3247 |
51409 |
51439 |
+ |
(ATC)n |
Simple_repeat |
| scaffold3247 |
51800 |
51817 |
+ |
(A)n |
Simple_repeat |
| scaffold3247 |
52537 |
52600 |
+ |
A-rich |
Low_complexity |
| scaffold3247 |
52630 |
52852 |
+ |
RS537 |
Unspecified |
| scaffold3247 |
52851 |
52897 |
+ |
A-rich |
Low_complexity |
| scaffold3247 |
52898 |
52936 |
+ |
(A)n |
Simple_repeat |
| scaffold3247 |
52935 |
52974 |
+ |
(AATTAC)n |
Simple_repeat |
| scaffold3247 |
52975 |
52998 |
+ |
A-rich |
Low_complexity |
| scaffold3247 |
53935 |
54003 |
+ |
A-rich |
Low_complexity |
| scaffold3247 |
54019 |
54447 |
- |
PL580 |
Unspecified |
| scaffold3247 |
54655 |
54671 |
+ |
(T)n |
Simple_repeat |
| scaffold3247 |
54672 |
54766 |
+ |
(ATA)n |
Simple_repeat |
| scaffold3247 |
54767 |
54785 |
+ |
(T)n |
Simple_repeat |
| scaffold3247 |
56241 |
56504 |
- |
RS217 |
Unspecified |
| scaffold3247 |
56483 |
56530 |
- |
MEGY-I_MT |
LTR/Gypsy |
| scaffold3247 |
56506 |
56594 |
+ |
RS649 |
Unspecified |
| scaffold3247 |
56759 |
56837 |
- |
RS215 |
Unspecified |
| scaffold3247 |
57418 |
57462 |
+ |
A-rich |
Low_complexity |
| scaffold3247 |
58069 |
59104 |
- |
RS215 |
Unspecified |
| scaffold3247 |
59600 |
59631 |
+ |
(ATATAG)n |
Simple_repeat |
| scaffold3247 |
60456 |
60870 |
+ |
RS458 |
Unspecified |
| scaffold3247 |
60934 |
60991 |
- |
RS458 |
Unspecified |
| scaffold3247 |
61431 |
61473 |
+ |
(TATTA)n |
Simple_repeat |
| scaffold3247 |
61646 |
61664 |
+ |
(A)n |
Simple_repeat |
| scaffold3247 |
61707 |
61732 |
+ |
(AAT)n |
Simple_repeat |
| scaffold3247 |
62008 |
62033 |
+ |
(TAAA)n |
Simple_repeat |
| scaffold3247 |
63014 |
63395 |
+ |
G-rich |
Low_complexity |
| scaffold3247 |
63307 |
63395 |
+ |
G-rich |
Low_complexity |
| scaffold3247 |
63490 |
63522 |
+ |
(T)n |
Simple_repeat |
| scaffold3247 |
63609 |
63928 |
- |
RS2543 |
Unspecified |
| scaffold3247 |
64056 |
64088 |
+ |
(CTA)n |
Simple_repeat |
| scaffold3247 |
64093 |
64160 |
+ |
(CTT)n |
Simple_repeat |
| scaffold3247 |
64144 |
64214 |
+ |
(TTCAT)n |
Simple_repeat |
| scaffold3247 |
64202 |
64246 |
+ |
(TTTTATTT)n |
Simple_repeat |
| scaffold3247 |
64247 |
64275 |
+ |
(T)n |
Simple_repeat |
| scaffold3247 |
65513 |
65552 |
+ |
(TCCCT)n |
Simple_repeat |
| scaffold3247 |
74088 |
74132 |
+ |
(TAAA)n |
Simple_repeat |
| scaffold3247 |
74522 |
74612 |
+ |
(GACCCA)n |
Simple_repeat |
| scaffold3247 |
74842 |
74890 |
- |
RS3968 |
Unspecified |
| scaffold3247 |
74891 |
74920 |
+ |
(AGTAAGG)n |
Simple_repeat |
| scaffold3247 |
75067 |
75122 |
+ |
(AGACCC)n |
Simple_repeat |
| scaffold3247 |
75159 |
75190 |
+ |
G-rich |
Low_complexity |
| scaffold3247 |
75479 |
75557 |
+ |
A-rich |
Low_complexity |
| scaffold3247 |
75873 |
76100 |
+ |
ATCopia28_I-int |
LTR/Copia |
| scaffold3247 |
76091 |
76604 |
- |
PL444 |
Unspecified |
| scaffold3247 |
76595 |
76806 |
- |
PL501 |
Unspecified |
| scaffold3247 |
76982 |
77044 |
+ |
(ACA)n |
Simple_repeat |
| scaffold3247 |
77177 |
77210 |
+ |
(TAA)n |
Simple_repeat |
| scaffold3247 |
77877 |
79017 |
- |
RS443 |
Unspecified |
| scaffold3247 |
78803 |
79539 |
+ |
RS2123 |
Unspecified |
| scaffold3247 |
80100 |
80245 |
+ |
PEABODY_I-int |
LTR/Gypsy |
| scaffold3247 |
80335 |
80460 |
+ |
PEABODY_I-int |
LTR/Gypsy |
| scaffold3247 |
80934 |
81069 |
+ |
DEA1 |
LTR/Gypsy |
| scaffold3247 |
81176 |
82356 |
+ |
DEA1 |
LTR/Gypsy |
| scaffold3247 |
82356 |
83241 |
+ |
Gypsy-39_Mad-I |
LTR/Gypsy |
| scaffold3247 |
83359 |
83946 |
+ |
PL189 |
Unspecified |
| scaffold3247 |
84364 |
84402 |
+ |
(GCCG)n |
Simple_repeat |