scaffold32730 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold32730 |
1 |
674 |
- |
RS23 |
Unspecified |
| scaffold32730 |
342 |
1071 |
- |
RS2918 |
Unspecified |
| scaffold32730 |
1665 |
2903 |
- |
RS141 |
Unspecified |
| scaffold32730 |
5217 |
5658 |
- |
RS238 |
Unspecified |
| scaffold32730 |
5664 |
6025 |
+ |
RS5224 |
Unspecified |
| scaffold32730 |
6646 |
7219 |
- |
RS23 |
Unspecified |
| scaffold32730 |
6756 |
7222 |
- |
PL152 |
Unspecified |
| scaffold32730 |
7989 |
8029 |
+ |
(TCTATT)n |
Simple_repeat |
| scaffold32730 |
8830 |
8891 |
+ |
A-rich |
Low_complexity |
| scaffold32730 |
9460 |
9501 |
+ |
WHAM2_TM-int |
LTR/Gypsy |
| scaffold32730 |
9502 |
10453 |
+ |
PL595 |
Unspecified |
| scaffold32730 |
10796 |
10840 |
+ |
(TTTTAG)n |
Simple_repeat |
| scaffold32730 |
10943 |
10996 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold32730 |
11689 |
12310 |
+ |
RS1560 |
Unspecified |
| scaffold32730 |
12425 |
12485 |
+ |
(TTATAT)n |
Simple_repeat |
| scaffold32730 |
13584 |
13615 |
+ |
(ATA)n |
Simple_repeat |
| scaffold32730 |
14108 |
14468 |
+ |
(AGT)n |
Simple_repeat |
| scaffold32730 |
14380 |
14468 |
+ |
(AGT)n |
Simple_repeat |
| scaffold32730 |
16612 |
16656 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold32730 |
16725 |
16775 |
+ |
(TTTG)n |
Simple_repeat |
| scaffold32730 |
17013 |
17067 |
+ |
(A)n |
Simple_repeat |
| scaffold32730 |
17276 |
17340 |
+ |
A-rich |
Low_complexity |
| scaffold32730 |
17517 |
17586 |
+ |
(CCA)n |
Simple_repeat |
| scaffold32730 |
18101 |
18140 |
+ |
(ATGCTCG)n |
Simple_repeat |
| scaffold32730 |
18750 |
18789 |
+ |
(A)n |
Simple_repeat |
| scaffold32730 |
19177 |
19538 |
+ |
(AGT)n |
Simple_repeat |
| scaffold32730 |
19450 |
19538 |
+ |
(AGT)n |
Simple_repeat |
| scaffold32730 |
20880 |
20898 |
+ |
(T)n |
Simple_repeat |
| scaffold32730 |
21170 |
21221 |
+ |
A-rich |
Low_complexity |
| scaffold32730 |
21653 |
21717 |
+ |
(ATTATTG)n |
Simple_repeat |
| scaffold32730 |
21984 |
22300 |
+ |
(AATT)n |
Simple_repeat |
| scaffold32730 |
22228 |
22300 |
+ |
(AATT)n |
Simple_repeat |
| scaffold32730 |
22770 |
22804 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold32730 |
22877 |
22924 |
+ |
(TATAATT)n |
Simple_repeat |
| scaffold32730 |
23113 |
23191 |
+ |
(ATT)n |
Simple_repeat |
| scaffold32730 |
23615 |
23661 |
+ |
G-rich |
Low_complexity |
| scaffold32730 |
24373 |
24610 |
- |
RS13348 |
Unspecified |
| scaffold32730 |
25060 |
25102 |
+ |
(T)n |
Simple_repeat |
| scaffold32730 |
25209 |
25236 |
+ |
(ATATT)n |
Simple_repeat |
| scaffold32730 |
25723 |
25788 |
+ |
A-rich |
Low_complexity |
| scaffold32730 |
25895 |
26026 |
+ |
(CAA)n |
Simple_repeat |
| scaffold32730 |
26045 |
26109 |
+ |
A-rich |
Low_complexity |
| scaffold32730 |
26068 |
26105 |
+ |
GA-rich |
Low_complexity |
| scaffold32730 |
26110 |
26127 |
+ |
(A)n |
Simple_repeat |
| scaffold32730 |
26144 |
26173 |
+ |
(AGGAG)n |
Simple_repeat |
| scaffold32730 |
27013 |
27391 |
- |
RS539 |
Unspecified |
| scaffold32730 |
27139 |
27723 |
- |
RS204 |
Unspecified |
| scaffold32730 |
28255 |
28304 |
+ |
(TATTTA)n |
Simple_repeat |
| scaffold32730 |
33525 |
33757 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold32730 |
33880 |
33937 |
+ |
G-rich |
Low_complexity |
| scaffold32730 |
34923 |
34955 |
+ |
(T)n |
Simple_repeat |
| scaffold32730 |
37602 |
37645 |
+ |
(TTCCACA)n |
Simple_repeat |
| scaffold32730 |
37950 |
37987 |
+ |
(TAAAA)n |
Simple_repeat |
| scaffold32730 |
38406 |
38438 |
+ |
(GAA)n |
Simple_repeat |
| scaffold32730 |
38746 |
38807 |
+ |
(AAT)n |
Simple_repeat |
| scaffold32730 |
38987 |
39088 |
+ |
(CACCAC)n |
Simple_repeat |
| scaffold32730 |
39594 |
39646 |
+ |
(TTAGTT)n |
Simple_repeat |
| scaffold32730 |
41160 |
41271 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold32730 |
42547 |
43186 |
- |
PL219 |
Unspecified |
| scaffold32730 |
43822 |
44155 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold32730 |
44423 |
44813 |
+ |
PL475 |
Unspecified |
| scaffold32730 |
45317 |
45370 |
+ |
A-rich |
Low_complexity |
| scaffold32730 |
45668 |
45701 |
+ |
(T)n |
Simple_repeat |
| scaffold32730 |
47495 |
47546 |
- |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold32730 |
48199 |
48506 |
- |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold32730 |
48510 |
49383 |
- |
Copia-10_BD-I |
LTR/Copia |